Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   <-                                                                                        ------>ZmHOX2a(2)                                         --------->ANAC58                              <------ZmHOX2a(2)                                         --------->ANAC58                             --------->ARR14(2)                                      ===================HOX2a_HOX2a                  <---------ARR14(2)                                      ------>ZmHOX2a(1)                               <---------ARR11(3)                                     --------->TOE2(3)                                --------->ARR11(3)                                <---------DAG2                                        <---------AGP1                             ------>ZmHOX2a(2)                  <------ZmHOX2a(1)     --------->AGP1<                             ================HOX2a_HOX2a        ==============================HOX2a_HOX2a              --------->AHL20(2)<----------DOF2                 ===============================HOX2a_HOX2a          --------->ATHB12  =================HOX2a_HOX2a       <----------ID1   <---------YAB1    <--         <---------YAB1     <------ZmHOX2a(2)               ---------->DOF2  <---------SPL7  <-------         <-------TEIL      <---------ARR14(2)     =====================HOX2a_HOX2a  ----------->ARR10 ----------DOF2            --------->ARR14(2)     <------ZmHOX2a(2)         <---------DAG2   --------   ttctttcaagtttcattgaaatatgtagggatcccttttcctcaagacatcgatcactgttcaaaaggactagacttgccttacgatagatcttctcgtg  9664800                                                           <---------HSFB2a(1)                                                           --------->HSFB2a(1)                                                           ------>ZmHOX2a(2)                                                           =============HOX2a_HOX2a                                                           ==========================HOX2a_HOX2a                                                          ===========================HOX2a_HOX2a                                                          <------ZmHOX2a(2)                                                          ==============HOX2a_HOX2a                                                         <---------ARR11(1)                                                         <---------ARR11(3)                                                         <-----------ARR10                                                         <---------AGP1                                                         --------->ARR14(2)                                                         --------->ARR11(3)                                                         <---------ARR14(2)                                                        <---------ARR14(1)                                                        <---------CCA1(2)                                                       --------->LBD16                                                      --------->ANAC46               --------->TOE2(3)                      --------->LBD16          ------->GAMYB                              <---------HSFB2a(2)        -------->P                                   --------->HSFB2a(2)    --------->ANAC58                              <---------ARR14(2)    --------->ANAC58                              --------->ARR14(2)   --------->MYB59                              <---------HSFC1(2) <---------MYB52(1)    <---------ALFIN1         <------MYB46(1)  ------>ZmHOX2a(1) --------MYB46(3)     ----------->HVH21         --------->HSFC1(2) ---------DOF2 --------->YAB1                   <------MYB83<----------DOF2                         < -------GAMYB<-----------ARR10     --------->MYB46(3)<---------LBD16                                < -------ANAC46<---------ATHB12--------->YAB1    <---------MYB46(3)                          --------- --O2   --------->ANAC58    <-----------HVH21   <---------HSFB2a(1)                      --------->ANAC46 ->O2   --------->ANAC58  --------->MYB46(3)    --------->HSFB2a(1)           ------>ZmHOX2a(1)------   gctgttaggcaacccaatcttagcccgacccatcacaacaactccatgggaggttcccggatctttcctcgacgataatcctagcaattctacgtaaaga  9664900                       --------->YAB1                       -------->ATHB1                       --------->ATHB12                       <--------HAHB4                       <---------ICU4               --------->MYB52(1)    <---------ANAC58  <---------ATHB12    <---------ANAC58  --------->ICU4    <---------AtLEC2 <---------ARR11(1) ---------ANAC58    <---------ARR14(1)                            <----------DOF2 <------MYB83 ---------ANAC58  ------->GAMYB                                  --------->TOE2(3)<------MYB46(1) ->DOF2    <-----------ARR10                              --------->YAB1         <---------AtMYB61 --->YAB1  --------->GLK1(2)    <----------DOF2          <---------YAB1          --------->MYB59   taacttgcatgagaatctaaccgaatcattacttctttgttaaacttcaacttgtcaccatgataaacctttatcacttgtgtttggtctcgttcttcag  9665000                                                                                ------>MYB83                                                                                ------>MYB46(1)                                                                                -------->P                                                                         --------->HSFB2a(1)                            ---------->DOF2                          <---------ANAC58              <-                     ------->TEIL   --------->ANAC46      <-----------HVH21    ------>ZmHOX2a(1) <---                  <---------ANAC55(2)           <---------At4g35610  <---------ANAC58       <--------                  --------->ANAC55(2)         <---------HSFB2a(2)<---------ANAC58          --------->AHL20(2)                 --------------->AtSPL8       --------->HSFB2a(2)<---------ANAC58      <---------YAB1   ggtctgtatatagcacaactacgtacttcttaaagccctcgtaacgtttcagaagagttttgtcatcgcttgcgaatgctcctaccctcacgattaaatc  9665100                                                                 <---------ANAC58                                                                 <---------ANAC58                                       --------->ATHB12         <---------ZAT2               <---------AHL20(2)      <---------ICU4           --------->ZAT2              --------->AHL20(2)       <--------HAHB4        <---------At4g35610              <---------AHL20(2)       --------->YAB1        --------->At4g35610     <---------ANAC58                 <---------ATHB12       ------>NtERF2     <---------ANAC58         <----------DOF2               --------->DEAR3(1)     <---------ANAC46     ---------->ID1--------->TOE2(3)   <---------DEAR3(1)      <---------ICU4 --------MYB52(1)      <----------DOF2--------->ICU4     --------->ANAC46   <---------ARR11(3) --------RAV1(1)    <-----------GT1   <---------YAB1<-----------ARR10       --------->ARR11(3)      - -AHL20(2)  --------->TOE2(3) <---------MYB52(1)   <---------MYB52(1)   <---------ALFIN1          ---   tgttgtttcgtcttcattaatttttcttttccctttgctaatcattagtcttcgtttcttcgccgctgcttgccccaagttcttcatcatctctagagaa  9665200                                        <--------HAHB4                                        <---------ICU4                                        --------->AHL20(2)                                        <---------AHL20(2)            --------->CCA1(2)           --------->ATHB51           <---------ARR14(2)           -------->ATHB1           --------->ARR11(1)          <---------ATHB51                                       <------           --------->ARR11(3)          --------->ICU4                                     <----------DOF2         <---------TOE2(3)         ------------>CBF                                    <-----------GT1         <---------YAB1       <-----------TBP                                      <----------DOF2 <-         ----------->ARR10  <-----------TBP      <----------DOF2                <-----------GT1  ---- ---------->GT1         <---------TOE2(3)      ------>ZmHOX2a(1)                ---------->ID1<------ ------->DOF2           <---------TOE1(3)  <-----------GT1 ----------->GT1     <-----------GT1<------   caaagtgaattaagatttggagttttagggttttatatacaattatttcctcttttttctagggtttattctaaatatgtttttccttttttctttgcat  9665300      <---------ICU4      -------->HAHB4      --------->YAB1     --------->ICU4     <---------YAB1   --------->YAB1                                                       --------->AHL20(2)   <---------ICU4                                                       <---------AHL20(2)  --------->ICU4                                             --------->ANAC58 ---ANAC58                                                   --------->ANAC58 --------YAB1                                                --------->ANAC46                  <----- ------->GT1      <-----------GT1                 <---------TOE1(3) <---------AHL20(2)     <---------AHL20(2) ---AtLEC2    <---------AHL20(2)                  <---------TOE2(3) --------->AHL20(2)     --------->AHL20(2) ---ANAC58    --------->AHL20(2)               <---------AHL20(2)  --------->AHL20(2)     --------->AHL20(2)   ggtgataatgatgaaattatatactccctctgtttctgaatatttgtattttaagggttttacacacaaattaataaaacatacaaatctcatttaattt  9665400                                                                                                 <---                                                                                                 ----                                                                                               <-----                                                                                             <-------                                                                                            ---------                              <---------MYB52(2)                      ----------->GT1    <---------AHL20(2)                         --------->YAB1                             <---------WOX13(1)  <---------AHL20(2)                         <-----------GT1                           <------------CBF     --------->AHL20(2)                      --------->YAB1           --------->AHL20(2) --------->ATHB12      <---------AHL20(1)                      <---------ICU4           <---------AHL20(2)<---------YAB1         <---------ARR11(3)                     --------->AHL20(2)     --------->YAB1       <---------AHL20(2)     --------->AHL20(1)                     <---------AHL20(2)     --------->AHL20(2)  --------->AHL20(2)      --------->ARR11(3)                   --------->TOE2(3)       <---------ATHB12     <---------AHL20(1)     --------->AHL20(2)                  <---------ICU4       ------------>CBF ----------->GT1             <---------AHL20(2) ----AHL20(2)    <---------YAB1        --------->MYB46(3)       --------->AHL20(1) --------->AHL20(2)   atctcttacctagaaaaacatcattaattacaactaatctaaccaataaaaaaatatgatgtaaaatataattggttaaaaactattaaatatatttaat  9665500                                                                                               <-----                                                                                              <<<<<<<                                                                                              -------         --------->DAG2                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        ---------->DOF2                                          --------->YAB1               <<<<<<<  <---------AtLEC2                                           --------->AHL20(2)               <<<<<<< ------ICU4                                             <---------ZAT14                      <------- ----->ATHB12                           --------->AHL20(2) --------->ANAC46      --------->ARR14(2) ----TOE2(3)                           --------->AHL20(2)  --------->ANAC55(1)   <---------ARR14(2)xx --AHL20(2)                        --------->AHL20(2)   --------->ZAT14        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) >AHL20(2)----------->GT1     ----------->GT1       <-----------GT1   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   gtttgcatagaaaagtgaaaacaacacttatattgaaaaaaataaaaaacttttaaactacacttaattagaaacagagggagtatatgaaaattggtca  9665600                                                                              <---------AHL20(2)                                                                     <---------AHL20(2)       --------->ANAC46         ---------->DOF2                  --------->AHL20(2)      --------->ANAC58     <---------ALFIN1        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->AHL20(2)  --------->ANAC58 ----WRKY38(1)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------AHL20(2) <---------AHL20(2) <<<WRKY26                --------->ANAC58                      <---------AHL20(2) <---------AHL20(2) -->WRKY18(1)             --------->ANAC58                      --------->AHL20(2) --------->AHL20(2) <<<WRKY43                --------->ANAC46                   --------->AHL20(2)<---------AHL20(2)   - <<<WRKY38           --------->YAB1         <-----------HVH21<---------AHL20(2)--------->AHL20(2)<--- ----HVH21       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)        --------->AHL20(2)<---------AHL20(1)<---- xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----------->HVH21       <---------AHL20(2)--------->AHL20(2)-----   agtctctccacataaatgacatatcatcacacaacaaagtgacatatgtcattcgatgttttttaaattaataaaactaataaaattaaataagcaaatt  9665700  Previous    Next  AGI:  At3g26390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G39782.1) Range:  from: 9664687    to: 9665187    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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