Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ----------->RAV1(1)    --------->ANAC58    --------->ANAC46                                       <---------ARR11(3)    --------->ANAC58                                       --------->ARR11(3)  ---------->DOF2                                      ========================================bZIP_DOF --->GAMYB                                             ---------->DOF2                          <---- ---->MYB46(3)              --------->ANAC58      <---------ARR14(2)  <---------ANAC58          <---- -----MYB52(2)            ---------->DOF2 --------->AHL20(1)          --------->ANAC55(2)      ------ ---->RAV1(1)       --------->AHL20(2)    --------->ARR11(3)          ----------->GT1--------->TGA1a< ->MYB46(3)        <<<<<<<<<ARR2     ---------->DOF2  --------->LBD16 <---------ANAC58  --------->ATHB12 ->RAV1(1)    --------->YAB1--------->ANAC58      --------->ARR14(2)  <---------ANAC55(2)    <-------   aaacaaaagcaacatatcacaatcaaataaaagcaaaatcaaagtatattggaatccgaaagaactctaatttcgtaactaaaactcacatcagtggtac  9653700                                                                    --------->ANAC58     <------ZmHOX2a(2)                                              --------->ANAC58    --------->ARR11(3)--------->ANAC58                          --------->YAB1    <---------ARR11(3)--------->ANAC58                   --------->ANAC58 -----TOE2(1)     <-----------RAV1(2)  --------->At4g35610     <---------ATHB12 -----TOE1(1)    --------->At4g35610   <---------At4g35610   --------->WOX13(1)                   --- --->SPL7        <-------TEIL      --------->ANAC58      --------->ANAC58                         --- ------ZmHOX2a(1)--------->ZAT14   --------->ANAC58    ---------->DOF2                       <------- --SPL7         --------->ALFIN1<---------ATHB12     ------>ZmHOX2a(2)              --------->ANAC46   gaggaagatcaaacgaaggtgcagacgaaaacccatcaagcatctcactgtttgatccaaagccaatcacaggcatagttgtctccaatccactagtgtc  9653800                                                   <---------AHL20(2)                                                   --------->AHL20(2)                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                          --------->AHL20(2)                                          -------->ATHB1                      --------------->AtSPL8                                          --------->ATHB51                    --------------->AtSPL3                                         --------->ICU4                       <---------------AtSPL8   --------->ATHB12                      <---------YAB1                 <---------ANAC58  <-------TEIL                      --------->ANAC46                    <---------ANAC58 <---------ATHB12 ------>ANAC58                 <---------ARR14(2) --------->YAB1 --------->YAB1     ----------------- ------>ANAC58                 --------->ARR14(2) <---------AHL20(1)  ------->TEIL --------->ANAC58 --ZAT6                  --------->YAB1  <---------ATHB51        <---------ICU4    --------->ANAC58   aagcttcattgtcaaatttctacagaatcatcgaatacccacaattattcaataaaattatgcaaaatcatgaagcttgagaggtacccaaatcagggta  9653900                                         --------->ANAC58                                         --------->ANAC58                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 --------->ARR14(2)                  --------->YAB1 <---------AGP1              <---------ANAC46               <----------DOF2   --------->ARR11(3)      <---------ANAC58      --------->TOE2(3)         --------->At4g35610     --------->AGP1          <---------ANAC58      --------->TOE1(3)        <---------ARR11(3)       <---------ARR14(2)     ------->TEIL    --------->TOE1(3)        --------->ARR11(3)      <---------CCA1(2)<---------YAB1         --------->TOE2(3) >AG---------->DOF2             <---------ARR14(1)<----------DOF2    <-----------GT1           ------   ttaacaaaaagagcttcctttcacaattcaaatcggatctagcacgagattacttttgtacgtgtgtgtataaaccataaaccctaatacttcattgtaa  9654000                                                                          --------->GLK1(2)                                ----------->RAV1(2)               --------->At4g35610                     <---------ANAC58                        <---------TOE2(3)                     --      --------->MYB52(1)       --------->MYB52(1)           --------->MYB52(1)         ----------->GT1 ---------->DOF2     <---------ANAC58                       <-----------GT1  --------->ALFIN1      -- ---->DOF2          ------>NtERF2                   ----------->GT1  --------->At4g35610    ---------   agtcaaagtaacgacaattaggggcctgagacatacctgaagagcgaaatcgagtagaaaattaacgaagcagaagaatgtgtgagaattggagaaaaga  9654100                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                           --------->CCA1(2)        --------->YAB1                                                          <---------ARR11(3)        <---------ICU4                                                          --------->ARR14(2)        --------->ATHB12                                  *TSS                    <---------ARR14(2)        <--------HAHB4                          --------->At4g35610             --------->ARR11(1)       <---------ATHB12                          <---------At4g35610             --------->ARR11(3)  <--------P                     <---------ANAC46                   --------->ANAC58    ----------->GT1     <---------ATHB51<---------ANAC58                   --------->ANAC58<-----------HVH21<---------ANAC46 ------->ANAC58      <---------ANAC58           --------->SPL7     --------->ARR14(2)    <---------ANAC58 ------->ANAC58  <---------HSFC1(2)            --------->MYB52(1)  <---------ARR14(2)    <---------ANAC58 ->DOF2          --------->HSFC1(2) --------->MYB52(1)  ----------->ARR10 <---------ANAC46  <--------   gaagcaaattatggagggatgtttcttgagctctgggcaaaccgaatgcgaacggggcaagatatgggcgatcgggtcgggttgaatcatttcgggtcat  9654200                                                            <----------DOF2                                                    --------->ATHB12                                                    -------->ATHB1                                                    --------->ATHB51                                                    <---------ICU4                         <---------TOE2(2)                                                   --------->ICU4                          <---------TOE1(2)                                <-----------RAV1(1)<---------YAB1                        <---------ANAC58                       <---------ZAT6              <---------ATHB51  <------------------------ANAC81                   <---------ZAT14              ------------>ATHB5  <----------DOF2      <---------ANAC58  <----------DOF2  --------->ZAT14      <----------DOF2    <---------DAG2         --------->AHL20(2) ---HVH21 ---------->DOF2       <---------YAB1  ----------------->AGL2            <---------AHL20(2)   accgcttaagtttaaagacagaacagtgttcattatgttgggcttcatgggccattattggccttttcttctttttttttttttttaatttccttggtta  9654300                             --------->ATHB12                             <--------HAHB4                             <---------ICU4                     <---------AHL20(2)                     --------->AHL20(2)                     --------->ANAC58                  <---------DAG2                            ----------->GT1                  <----------DOF2                           --------->ANAC58        <------MYB83 <---------YAB1                    <----------ID1                       <--------        ----------->GT1   --------->YAB1     <---------AHL20(2)                   --------->AHL20(2)        <---------ANAC55(2) <---------ATHB12 --------->AHL20(2)                   <---------AHL20(2)        <------MYB46(1)   --------->WOX13(1) --------->AHL20(1)             <------ZmHOX2a(2)      <-       --------->MYB59  <---------YAB1       <---------AHL20(1)    <---------ARR11(3)   <---------ANAC55(2)       --------->MYB111(1)<-----------GT1   --------->AHL20(2)     <---------AHL20(1)   --------->ANAC55(2)  ------->TEIL <-----------GT1              <---------AHL20(2)     --------->AHL20(1)   ----------->GT1   tatgaatattaggtatataactttttattaatcatttgttattcaaataaatttagtaagacaagtcaaaatatttggatcaaatttatcaggtattatt  9654400             --------->AHL20(1)             <---------AHL20(1)             <---------AHL20(2)             --------->AHL20(2)       --------->AHL20(2)                                      -------        --------->AHL20(2)            <---------AHL20(2)                                     <-------        <---------AHL20(2)          <---------YAB1          <-----------GT1                  <-------     <---------AHL20(2)        ----------->GT1       <---------TOE2(3)        <---------ARR11(3)   <---------YAB1              <---------ZAT6     <---------YAB1              <---------GLK1(2) -YAB1  <---------AHL20(1)  --------->DAG2       <---------AHL20(2)   <----------DOF2        <------- --------MYB52(1)          ---------->DOF2 --------->YAB1   <<<<<<<<<<<<<<<<<LFY   <---------AHL20(2)   cgtttattattttattttattagttggaataaagtgttattttaatcaaatttttatggattttacattggactttaacagattttaaaatgtttatggt  9654500                                                                                 --------->ATHB12                                                                               <---------TOE2(3)                                                                               <---------TOE1(3)                                                                         <---------TOE1(3)                                                                       <---------AHL20(2)                                                                      --------->AHL20(1)                                                                  <---------AHL20(2)                       ---------->DOF2                            --------->AHL20(2) <------MYB83                  --------------->AGL15               >>>>>>>>>RAP2.2 <---------AHL20(2)                  <---------------AGL15            <---------CCA1(2)  --------->AHL20(2) ---->GT1        ----------------->AGL3         <-------TEIL      <---------AHL20(1) <------MYB46(1) --YAB1          ----------------->AGL2--------->ARR11(3)   ----------->GT1--------->TOE2(3) --TOE1(3)       <-----------------AGL3<---------ARR11(3)  ----------->GT1 --------->YAB1 --TOE2(3)       ----------------->AGL1<---------GLK1(2) ---------->DOF2 <---------TOE2(3)   taaacatacaagagaaattgcctcatatagcaccatatcaagatttttggttcatatctaaaagttaaaaaatttaatgttaatgtttggttttaaaatc  9654600  Previous    Next  AGI:  At3g26340.1    Description:  20S proteasome beta subunit E, putative. Identical to Proteasome subunit beta type-5-B precursor (PBE2) [Arabidopsis Thaliana] (GB:Q9LIP2); similar to PBE1 (20S proteasome beta subunit E1), peptidase [Arabidopsis thaliana] (TAIR:AT1G13060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46631.1); contains InterPro domain Proteasome, beta-type subunit, conserved site (InterPro:IPR016050); contains InterPro domain Peptidase T1A, proteasome beta-subunit; (InterPro:IPR000243); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 9651654    to: 9654134    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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