Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           ----------->RAV1(2)                                                         <---------At4g35610                                                         --------->At4g35610                                                      --------->TGA2(2)                                                     <-----------HVH21                                                     <-----------TGA1                                                    <---------ANAC55(2)                                                    <---------O2                                                    --------->O2                                                    --------->ANAC58                                                    --------->TGA1a                                                    --------->bZIP60(1)                                                    <---------TGA1a                                                    <---------bZIP60(1)                                                    --------->ANAC55(1)                                                    --------->ANAC55(2)                                                    --------->bZIP60(2)                                                    --------->ANAC58                                                    --------->ANAC46                                                   <-----------STF1                                                  <---------DOF5.7(2)    --------->AHL20(2)                                              <---------MYB46(3)        <---------AHL20(2)                                              <------MYB46(1)           --------->AHL20(2)                                              <------MYB83           --------->AHL20(2)                       --------->AHL20(2)   <---------WOX13(1)       <---------AHL20(2)                     <---------AHL20(2)   --------->ATHB12       <---------YAB1            <---------AHL20(2)           <---------AHL20(2)--------->HSFB2a(2)                   <--- --------YAB1        --------->AHL20(2)----------------------->TaNAC69(2)<---------AHL20(2)     <----   ttttattcaagaattttttttaaaaaaatatagaataccatatttgattggttcacgtcatctggacatgataaattaatacatgttctacatgataaat  9566100                                       --------->YAB1                             <---------AHL20(1)                                --------->AHL20(1)                                --------->AHL20(2)                                <---------AHL20(1)                                <---------AHL20(2)                  --------->ATHB12     <---------ICU4                       ----------->GT1                  <---------AHL20(2)  --------->ICU4                       --------->At4g35610                 <---------AHL20(1) --------->YAB1                      <---------At4g35610        --------->TOE2(3)      --------->AHL20(2)                       --------->ZAT2            ---  <-----------GT1--------->AHL20(1)<---------AHL20(2)                   --------->At4g35610 <-------- ------ICU4      --------->AHL20(2)<---------YAB1             <---------TOE2(3)   --------->AHL20(1) -----ATHB12     <---------AHL20(2)--------->AHL20(2)     --------->YAB1<---------ZAT2<---------AHL20(2)   catttttctgcctcaaaaatttattggctagaaatatataattatgttctaacaatctaatattaagaaatttcagcagcgtaattaattagttgtgtaa  9566200              <-----------GT1           <---------ICU4          --------->AHL20(2)                                                                      <--          --------->AHL20(1)                    <--------P                                       <---          <---------AHL20(2)         ----------->GT1                                          <------    ----------->GT1  <---------AHL20(2)  --------->AHL20(2)                         <----------DOF2 <   --------->YAB1   <---------AHL20(2)   <---------AHL20(2)                      <---------ARR11(3) - ------>AHL20(2)    --------->AHL20(2)  --------->AHL20(2)                 <-----------GT1 <------ZmHOX2a(2) -ANAC46 --------->AHL20(2)          <------ZmHOX2a(1)                <---------AHL20(2)  --------->ARR11(3)   gttaataagaaaaaaattacattttaatttgggaatggaggattaaattggtagtttttaaaaacaacatgtttattttgcaatttcttttagatcaagg  9566300                                                            ------>ZmHOX2a(2)                                                     <---------ANAC46                                                     --------->O2                                                    <------NtERF2                                                    ------>NtERF2                                                   --------->DEAR3(1)                                                  <------NtERF2                                                  --------->ATERF1(1)                                                 ------>NtERF2                                                 <---------RAP2.3(1)                                                <---------bZIP60(2)                                                --------->bZIP60(1)                                                <---------bZIP60(1)                                                <---------O2================HOX2a_HOX2a  ------>ZmHOX2a(2)                            --------->ATERF1(1)                                --- -----TEIL                                    <---------ATERF1(1)                                 --- -----P                                       <---------TGA2(2)                     --------->GLK1(1) ---TOE2(3)                                  ----------->TGA1            <-----------HVH21       ---- ---------ARR11(3)                     <----------DOF2 <------NtERF2 ------>ZmHOX2a(1)           ---- -------->ARR11(3)          ---------->ID1   ----------->HVH21 <----------DOF2      <---------GLK1(1)   ttgatcttgcaatttctctctagctaatttgttgttttggacttttggtgacgccgcgtcgatctcttttcctctcgtcccatcggaactcttctctctc  9566400                               --------->At5g28300                               <------NtERF2                              <---------MYB46(3)                              ----------->GT1                             <---------ANAC46                             <---------DEAR3(1)                            <---------ABI4(1)                            <------NtERF2                            --------->ATERF1(1)                           <---------ATERF1(1)                           <---------RRTF1(1)                           ------>NtERF2                           <---------RAP2.6(1)                           <---------RAP2.3(1)                           <---------DEAR4(2)                           <---------ORA47(2)                           <---------ERF1                          <---------RAP2.3(2)                          <---------RAP2.3(3)                          <---------ATERF1(2)                          <---------RAP2.6(2)                          <---------DREB2C(2)                          <---------DEAR3(1)                          --------->DEAR3(1)                          <---------RRTF1(2)                          <---------RRTF1(3)                         <------NtERF2                         <---------ABI4(1)                        <---------DEAR4(2)          <----------DOF2--------->ATERF1(1)         --------------------->WRI1     <---------At4g35610<---------RRTF1(1)   --------->SPL7       <---------ATERF1(1)  <---------MYB52(1)    <---------ERF1 <---------SPL7         ------>NtERF2                                                  <---------ARR11(3) --->NtERF2             <---------RAP2.3(1)                                            --------->ARR11(3) ------>LBD16          <---------DEAR3(1)                                        --------->YAB1     < ----->DEAR3(1)        <---------RAP2.3(3)              <---------At4g35610     <---------YAB1     <- ----->ANAC46          <---------RAP2.3(2)        <---------YAB1           <---------ATHB12   <------   cgccgtaagccgcttgaatgtttcgacggcggcggtgaaataaacaggttttatttttagcttagtcttcaagaccaatgttttcataagatgtctccac  9566500                                                                <---------CCA1(2)          --------->ARR11(3)                                  <---------ANAC58         <---------CCA1(2)                                <------------CBF       --------->ANAC55(2)                               -------->ATHB1       <---------ANAC55(2)                               --------->ATHB12  ----------->GT1                                        --------->YAB1  <------MYB46(1)                                        <---------ICU4  <------MYB83                                          <---------YAB1 --------->MYB59 <----------DOF2                        <---------ATHB12 --------->MYB46(2)    ---------->ID1                   --------->ICU4 ---------MYB55(1)   <-----------RAV1(1)    ------------>CBF  <---------ANAC58        <---------MYB52(1) --------MYB52(1)<---------DAG2       <---------ICU4 ------------>ATHB5  <------------CBF      ------ ---ALFIN1<---------ARR11(3)    --------->TOE2(3)    ------>ZmHOX2a(1)  <---------GLK1(2)    --------   cgttaggttacatatctctctttttgttgtttcatcttaattcttacacaatctcctaatcattgcatatcacagaattgtctaaaccgtttttgaaaag  9566600                                                                      <---------YAB1                                                                    --------->YAB1               <---------ANAC58                                     <---------ICU4     >>>>>>>>>>>>>>>>>LFY                                          --------->ICU4         <----------DOF2 <---------YAB1<---------ANAC58            <---------AHL20(2)      <---------ATHB12 <-----------GT1 --->ICU4 <-----------RAV1(1)             <-----------TBP         <---------RAP2.6(3)     <---------DAG2 -->DOF2<------------CBF    --------->AtLEC2              ---------->DOF2         ----------->TBP   atgatgaaaccattgttgcttctcttacccatgcacaaacttgaatttatagaggcatatcaaagagccatcatgagactctctatatacagctttatca  9566700                                            <------ZmHOX2a(2)                                           --------->ARR11(3)                                          <------ZmHOX2a(1)                         <---------------AGL15                    <----------DOF2---------->DOF2         --------->YAB1             --------->AtLEC2--------->YAB1<---------ARR11(3)   --------->At4g35610      <----------DOF2    --------------->AGL15      <----------DOF2     <-------TEIL      <----------   actatttcctttgccatggaaacttttctattcatagcaaagcaggatcatgttctttctaacatcatcttacatacatatatactcgcattatacgttt  9566800                                                                 <---------ZAT14                                                        <---------ZAT18                                                     <------MYB46(1)                                                     <---------ANAC58                                                     <------MYB83--------->ZAT14                                                     <---------ANAC58                                                     <---------ANAC46                                                    --------->MYB111(2)                                                    --------->MYB111(1)                                                    --------->MYB46(2)                                                    <---------AtMYB61                              <-                                          <---------ARR14(2)     <---------ZAT18                   <-                                          --------->ARR14(2)--------->MYB46(3)                  <----                                       <---------HSFB2a(2)  <---------ATHB12                  <------                                       --------->HSFB2a(2)--------->WOX13(1)              <----------             ----------->GT1     ---------->DOF2    <---------MYB46(3)                    ----------- -GT1      ---------->DOF2  ----------->GT1         --------->MYB59                       -----------   ccatatgtacagagaaagtttattcaaaacttgtaaaaagtctggaactggagtttggtgcaatcactgaactcgaactgggacaagtttgagaggtact  9566900 --------ANAC58                                                --------->ZAT18 --------ANAC58                                                <---------ZAT18 ------DOF2                                                 <---------At4g35610 -TEIL  <---------ZAT6                                      --------->At4g35610 -----AtSPL8          <---------GLK1(2)                   <-----------RAV1(2)       ----------->GT1 ---->AtSPL8         --------->ZAT2             <-----------HVH21       <---------ATHB12 ---->AtSPL3         <---------ZAT2      <----------DOF2<-----------HVH21         --------->ZAT14   ttcttgactactgtaagtataccagcttcttctgtatcgatgtctttatgtgtcatcccatcaggtgctctccaatcgaagaagtatagtaagttcaaga  9567000  Previous    Next  AGI:  At3g26147.1    Description:  unknown protein Range:  from: 9566320    to: 9566487    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g26150.1    Description:  CYP71B16 (cytochrome P450, family 71, subfamily B, polypeptide 16); oxygen binding. Identical to Cytochrome P450 71B16 (CYP71B16) [Arabidopsis Thaliana] (GB:Q9LTM7); similar to CYP71B20 (cytochrome P450, family 71, subfamily B, polypeptide 20), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26180.1); similar to CYP71B19 (cytochrome P450, family 71, subfamily B, polypeptide 19), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26170.1); similar to CYP71B17 (cytochrome P450, family 71, subfamily B, polypeptide 17), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26160.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60733.1); contai Range:  from: 9566864    to: 9568463    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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