Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->AHL20(2)                  ------>ZmHOX2a(1)                               --------->TOE1(3)                        --------->TOE2(2)                         ------>ZmHOX2a(1)                              --------->TOE1(2)                         --------->LBD16                                --------->TOE2(3)           <                       ------>ZmHOX2a(2)                             --------->GLK1(2)             <-                 <---------ANAC58    <---------AHL20(2)              <---------ARR14(2)   ----------- --------ID1     <---------ANAC58   --------->AHL20(2)    --------->ANAC58              ---------->DOF2 ->DOF2       <----------DOF2  --------->TOE2(3)          --------->ANAC58          --------->CCA1(2)   acaacaaatttctcatctttcttgatcctgaaaccctaattaatagattacaaactagacaagaattcaagaatcctaagaagaagatagaaaagtcaaa  9556400               --------------->AGL15              <-----------------AGL1                                                 <---------TOE1(2)            --------->GLK1(2)   <---------AHL20(2)           --------->ATHB12     --------->ATHB12      --------->LBD16 ----------->GT1                       <---------YAB1      --------->GLK1(2)     --------->LBD16 --------->DAG2                       <----------DOF2      <---------GLK1(2)    <---------LBD16---------->DOF2                   ---------->DOF2      <------ZmHOX2a(2) ----------DOF2<---------------AGL15            <---------ANAC46         --------->ARR11(3) --------DAG2 <-----------------AGL2            ----------->RAV1(2)      <---------ARR11(3) >GT1<---------LBD16--------->DAG2<-----------GT1<---------LBD16     <------ZmHOX2a(1)   acctttccagggaaattctgaaaaaggtaaacattttatcgagttttgttacctggaaagctttgattagaggaagatcaagaatcgttggattgtgagt  9556500                                   --------->LBD16                                  <---------ANAC58                                  <---------ANAC58                         --------->ANAC58                                         <------NtERF2                         --------->ANAC58                                        ------>NtERF2                       --------->CCA1(2)  <---------WOX13(1)                     <---------MYB46(3)                      <----------ID1    --------->ATHB12  ---------->DOF2       <---------DEAR3(1)                  ---------->DOF2 <---------ANAC46    --------->YAB1         <---------DEAR3(1)    --             --------->At4g35610 <---------LBD16    <-----------HVH21    <-------TEIL              --   ttgaaaaccagaaacagcttcaaagagacgaaacttgcggagtgattgtctcactgtcataaaagcagagaaagattcatcggtggctaagtagagaggc  9556600                                                                                            <--------                                                                                    <---------LBD16                                                                                    --------->LBD16                                                                                   --------->DEAR3(1)                                                              <---------ANAC46    <------NtERF2                                                              <---------ANAC58   <---------At5g28300                                                              <---------ANAC58   ------>NtERF2                                                             --------->ZAT2    <---------MYB55(2)                                                             --------->At4g35610<---------ALFIN1          --------->ANAC58                     ------>ZmHOX2a(2)     --------->ANAC58   <---------ARR14(2)          --------->ANAC46                    <------ZmHOX2a(2)      --------->ANAC58   --------->ARR14(2)          --------->ANAC58       <---------ARR14(2)          <---------ZAT2    --------->MYB46(3)        --------->MYB52(1)       --------->ARR14(2)          <---------At4g35610--------->DEAR3(1)   --------->WOX13(1)            <---------ARR11(3)     --------->MYB46(3)    --------->At4g35610   - ------->ANAC58                  --------->ARR11(3)   --------->MYB52(1)      <---------At4g35610 --- ------->ANAC58                  <-----------ARR10  --------->MYB46(3)    <-----------HVH21 ---------   caagtcaatctaacgcaattgaaacccattgagactatcttctctgcgatcgcatccaacggctgcttgctaagcccttcagccaccgcggtttcgagat  9556700                 ------->MYC3                 <-------MYC4                 ------->MYC4                 <-------PIF4          <-----------RAV1(1)                 ------->PIF5     <------NtERF2                 <-------MYC3    --------->ABI4(1)                 ------->MYC2   --------->RAP2.3(3)                 <-------MYC2   --------->RAP2.3(2)                 ------->PIF4   --------->DEAR3(1)                 <-------PIF5   --------->DREB2C(2)                --------->ANAC58--------->RRTF1(3)                --------->O2    --------->RRTF1(2)                <---------O2    <---------ALFIN1                --------->ANAC55(2)    <---------MYB46(3)                ================================bZIP_DOF                <---------TGA1a<------NtERF2                --------->TGA1a--------->ATERF1(1)                <---------ANAC55(2)  <----------DOF2              <---------ALFIN1 --------->RAP2.6(1)              <------------OsbHLH66  <---------MYB52(1)                  <---------MYB46(3)         --------->WRKY12      --------->DEAR4(2)                       --------->ALFIN1         ----------->HVH21     --------->RRTF1(1)                      <-------GAMYB       ===================MYC_MYB------>NtERF2                <---------ANAC46       <---------ZAT2          --------->ERF1           --------->ARR14(2)       --------->ZAT2          --------->DEAR3(2)       <---------ARR14(2)       <-------GAMYB           --------->ORA47(2)  <---------DEAR3(1) <------MYB83       --------->At4g35610     --------->RAP2.3(1)<------NtERF2       <------MYB46(1)       <---------At4g35610    <---------ATERF1(1) --------->ATERF1(1) <---------DEAR3(2)     <-----------RAV1(2)   --------->ANAC58     <---------DEAR3(1)   <---------MYB46(3)  ------>NtERF2 --------->ANAC58--------->RAP2.6(2)--------->DEAR3(1)<---------DEAR3(1) <---------DEAR3(1)        --------->ANAC46    --------->ATERF1(1)   <---------DEAR4(1) --------->DEAR3(1)      <-----------GT1       <------NtERF2  <---------ANAC58                      < -HSFB2a(2) --------->ANAC58  ------>NtERF2   ------>NtERF2   <---------ANAC58                     -- -------->ATERF1(1) --------->MYB52(2) --------->MYB52(2)<------ZmHOX2a(2) <---------ANAC46  -------- -------->HVH21------->TEIL--------->ANAC58   <-----------HVH21<-----------HVH21   ---------->DOF2 -- >HSFB2a(2) --------->ANAC58 --------->ANAC46 <---------RAP2.6(3)    <---------DREB2C(2) ---------->DOF2   gcgacggccagttgacgcacgtgagtttcacgcgccgccctttgttgccgtcgtcgacgatccagcgtgagtcggtggagggagggaaagcgaaagtggt  9556800                                                                             <---------ZAT6                                                                           <------MYB83                                                                           <------MYB46(1)                                                                          --------->MYB55(2)                                                                          --------->MYB111(1)                                                                          <---------DEAR3(1)   <---------SPL7                                                         --------->MYB46(2)  <---------ANAC46                                                        <---------MYB46(3)  <---------ANAC58                                                        --------->MYB111(2)  <---------bZIP60(2)                                                     <---------AtMYB61  <---------ANAC58                                                       <--------P ----------->STF1                                   <-----------GT1      <---------MYB55(1) ---------TGA2(2)                              <------MYB46(1)          <-------GAMYB --------->HVH21                               <------MYB83            <---------MYB46(3) ->ALFIN1   >>>>>>>>>TBF1              <-----------GT1                 <------MYB46(1) --------->TGA1---------->DOF2 >>>>>>>>>TBF1<---------MYB52(1)         <------MYB83  --------->TOE2(3)   gatgacgtagggaagaagaaagacagagatgaagaagaatttttccatttggtttatctctctctgtttcatttggttggtgttaatccctaattagttt  9556900                   <---------YAB1                  <---------TOE1(2)        <---------ICU4                  <---------TOE2(2)       --------->ICU4                                            <              <-------TEIL             --------->AHL20(2)                                           -            --------->KAN4(2)          <---------AHL20(2)                   --------->YAB1       ----           <---------HSFB2a(1)        <---------AHL20(2)                    <---------ICU4       <---           --------->HSFB2a(1)        --------->AHL20(2)                   <---------ATHB12 ---------           <---------HSFC1(2)         <---------AHL20(1)                   <---------YAB1<---------AHL20(2)           --------->KAN4(1)      <---------AHL20(2)                       --------->ICU4--------->AHL20(2)           --------->HSFC1(2)     --------->AHL20(2)                  --------->YAB1     --------->AHL20(1)           <---------KAN4(1)     --------->AHL20(2)                   --------->ANAC55(2)<---------AHL20(1)          <---------KAN4(2)  <---------AHL20(1)                 <---------YAB1<---------YAB1<--------   tgtaagaagtggaatgttcgtatgattttagtatatttaatttaattatgtctaatcttgtacattatgttttcgtaatcatggttcttaatattttaat  9557000            <---------MYB111(1)   <---------RVE1(1)            <---------MYB111(2)   <---------CCA1(1)                                      --------->YAB1 ---------AHL20(2)    <---------AHL20(2)  --------->YAB1                                <---------YAB1 -------->AHL20(2)   <---------AHL20(2)  <---------YAB1                                --------->ARR11(3) ----->AHL20(1) <----------DOF2  <---------ARR11(3)               <----------DOF2      <---------ARR11(3) ------AHL20(1) <---------DAG2   --------->ARR11(3)        <---------YAB1         --------->AHL20(2) >AHL20(2) ------>MYB83<------------CBF--------->YAB1     <---------TOE2(3)   ----------->GT1 -AHL20(2) ------>MYB46(1)     <---------TOE2(3)  ------>ZmHOX2a(1)        <------------CBF   atttttttagaccaactactttatttattgtttgagattttttataatactcctactatttatgtttgcattagtgaaattggtttaaatatcataagtt  9557100                                                                   --------->REM1(1)                        ---------->DOF2                          <-----------GT1               ---------->ID1                                 ----------->GT1              <-------GAMYB      --------->CCA1(2)      <---------AHL20(2)           ---------->DOF2             <---------MYB46(3) --------->ARR11(1)      <---------AHL20(1)       ------->TEIL             --------->MYB52(2) <---------ARR11(3)      --------->AHL20(2)  <---------AtLEC2        -   ttttttttttggtgtttgttgttttgaaaagaaagatttgaagtgttttggttcttaaaaaatttagttacaacatttgtatgaacataaagagaagaca  9557200                                                                              ----------->RAV1(1)                                                                       <---------HSFB2a(2)                                                                    <---------ARR14(2)                                                                    --------->GLK1(2)                                                                    --------->ARR14(2)         ----------->GT1                                          --------->HSFB2a(1)     ---------->DOF2                     ---------->DOF2          --------->HSFC1(2) --------->DAG2                   <-------MYC3         <-----------GT1 --------->HSFB2a(2)  --------- --------->DOF2    ---------->DOF2------->MYC3         --------->CCA1(2)--------->LBD16    --------->MYB46(3)   tataaagcaaagtgtatatagcaaagaacacataaacgtgtaagaaagaacacaaatatacaagtcgaagaatccagaaacaacacaacaacaacaacac  9557300  Previous    Next  AGI:  At3g26130.1    Description:  glycosyl hydrolase family 5 protein / cellulase family protein. similar to glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] (TAIR:AT1G13130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42484.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547); contains InterPro domain Ricin B-related lectin (InterPro:IPR008997); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 9554945    to: 9556848    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version