Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ARR11(3)                             --------->ARR11(3)                             --------->ARR14(2)                            --------->CCA1(1)                            --------->RVE1(1)                       --------->YAB1                       --------->TOE2(3)  <----------DOF2--------->TOE2(3)                                                        --------->AtLEC2 ----------GT1 <---------ARR11(3)                                                   --------->HSFB2a(2) ---------GT1  --------->ARR11(3)                                                   <---------HSFB2a(2) -->GT1       <---------CCA1(2)            <----------DOF2                       --------->ARR11(3) -   tttccttttcattcttatatctcaatcttaatatcttcattctatctttgtttaaaactcaaactaaaatgaaaactctataacatctagacatgaaaac  9537900                                              --------->YAB1                              <---------------AGL15                                  --------->YAB1                             <-----------------AGL2                          <------ZmHOX2a(1)             --------->AHL20(2)      ----------->GT1                       <---------TOE2(3)           ------->TEIL <-----------GT1     --------->AHL20(2)     ---------->DOF2  <---------YAB1 -------->ZAT6 <-----------GT1--------------->AGL15   ------>ZmHOX2a(1)   --------->YAB1   tctcactaaaatgaatttaacaaaatttacttctattttcggtgaaaataatactccttataaacatgaaaaagaatgaggatgtcatcatagtggataa  9538000                              --------->ATHB51                              -------->ATHB1                              --------->ATHB12                      <---------MYB46(3)                              <---------ICU4                   ------>ZmHOX2a(2)                             <---------AHL20(2)                <-------TEIL                             <---------ATHB51                 --------->ARR14(1)                     <---------AHL20(2)                       <------ZmHOX2a(2)                    --------->AHL20(2)  <---------RVE1(1)    --------->ARR14(2)                    <---------AHL20(1) <---------ARR11(3)    <---------ARR11(3)                    --------->AHL20(1) --------->ARR11(3)    --------->ARR11(3)                    <---------AHL20(2) <---------ARR14(2)---------->DOF2                          ---            <---------YAB1   --------->ICU4 --------->YAB1   <---------ARR14(2)                   ---            --------->ICU4   --------->AHL20(2)--------->AHL20(2) <---------MYB52(1)            -----      <------ZmHOX2a(1)  --------->YAB1--------->ARR14(2)--------->YAB1                      <-------   ctatgtaaggactcatgagtaatataatcaaattattagcagatattaataaactactataaagatccgttggatagatagatagataacttgttctacc  9538100                                                                      ----------->GT1                                                                   <---------YAB1                                                                   --------->ICU4                      --------->ANAC58        <-------TEIL       --------->YAB1                      --------->ANAC46      <-------MYC3         <---------ICU4                      --------->ANAC58      ------->MYC3        <---------YAB1                      --------->TGA1a       ------->MYC2        --------->ICU4 ------>ANAC58        --------->O2  --------->YAB1<-------TEIL--------->YAB1 ------>ANAC58        <---------O2  --------->ANAC55(1)       <---------ICU4            <<<<<<<<<ARR2 ---->ZAT6            <---------TGA1a       <-------MYC2   --------->YAB1               <---------ATHB12 ----GT1            <---------ALFIN1--------->ANAC46      --------->ICU4            ------------>CBF   actcaaaccaagttttggatgcacacgtctatatacacacataacacatgcatacatgtattgatcatcatgatgttatattccattacaatcaaacata  9538200                                                                  <---------DAG2                                                               ------>ZmHOX2a(2)                                                           ----------->HVH21                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                         <---------At4g35610                                                         --------->CCA1(2)                                                        --------->ARR11(3)                                                        <---------AGP1                                                        --------->AGP1                                                        <---------ARR14(2)                                                        <---------ARR11(3)   --------->LBD16            --------->YAB1                              --------->ARR14(2)   <------NtERF2         --------->YAB1                                <---------GLK1(1)   <---------LBD16        <---------AHL20(2)<---------YAB1               --------->GLK1(1)  *TSS             --------->AtMYB61 ----------->HVH21      --------->YAB1            ---------->DOF2 <----------DOF2---------->DOF2 <---   tatgtgacatataatcacaaattttcttataatttgttatgttatttactgagaaagagatctgatcgctttataagtccgcataaagagacaccacaac  9538300                                                            --------->AHL20(2)                                                            <---------AHL20(1)                                                            --------->AHL20(1)                                                            <---------AHL20(2)                                                           --------->YAB1                                                           --------->AHL20(2)                                                --------->LBD16                                                <---------TOE1(2)--------->AHL20(2)                                               --------->HSFB2a(2)                                <---------ARR14(2)   <---------MYB59                                --------->ARR14(2)<------ZmHOX2a(1)    --------->DAG2                           ------->GAMYB       <---------LBD16   <---------AHL20(2)      <<<<<<<<<TBF1       --------->ANAC58     <---------HSFB2a(2)    ---------->DOF2 <----------DOF2          --------->ANAC46    <---------LBD16<---------YAB1       <-----------GT1 -------DOF2              --------->ANAC58<----------DOF2  <---------AHL20(2) <----------DOF2 -------   tttctttcttcttcattcacttctatcaacgccaaatttgcagactttcccaggaccaaaattatattaaaaaaaagttccttttttctgatcaaattgt  9538400                   <---------REM1(2)              <----------DOF2             <---------ANAC58                                --------->MYB52(2)             <---------ANAC58                               <---------TOE1(2)         <---------ANAC46                                  <---------MYB52(1)         <---------ANAC58                                ------>ZmHOX2a(2)     <---------ANAC58         --------->AHL20(2)         --------->HSFB2a(1)     <---------ANAC58         <---------AHL20(2)         <---------MYB46(3) ---->GT1<---------ANAC58  --------->WOX13(1)            <---------HSFB2a(1)   gaaattcgcttgcttgctttcttcacagtcaattaattctctaacaaaacattcttcgatcgttcgttttcatcttctatgcttctctgatcagacacaa  9538500                                                                                    <---------YAB1                                                                                  --------->YAB1                                                                     <---------WOX13(1) <---------MYB46(3)                                                                   --------->ATHB12 --------->ICU4           <---------GLK1(2)        --------->GLK1(2)             --------->ICU4 --------->ICU4       ---------->DOF2             <---------ARR14(2)             <---------YAB1 <---------YAB1      ------->GAMYB                <---------GLK1(2)            --------->YAB1 --------->YAB1     --------->MYB46(3)            --------->ARR14(2)          <---------YAB1 --------->ICU4       <-    --------->ANAC58    <---------ANAC58                       --------->ICU4 <---------YAB1       --    --------->ANAC58    <---------ANAC58                 <---------MYB46(3)  <---------TOE2(3)   <---   gaacacaaccaaagaaactcactatagcttgtctgtagattctgatgttcgaattcttgttgttgatgatgattgaattgatgatgatgatggtttgatg  9538600                                           <---------YAB1                                           --------->ICU4                                         --------->YAB1                                         <--------HAHB4                                        <---------ATHB12                                        --------->ICU4                                   --------->ANAC55(1)                                   --------->ANAC55(2)                                   <---------ANAC55(2)              <---------ARR11(3)   --------->ANAC58              --------->ARR11(3)   --------->ANAC46                                                <-              <-----------ARR10    --------->ANAC58                                       <---------YAB1 --------At4g35610          --------->TOE2(3)   <-----------GT1                 --------->ARR11(3) -- ------->At4g35610        <-----------GT1<---------ICU4                        --------->YAB1      -- --------RAV1(2)      <----------DOF2   <---------YAB1           <-------GAMYB<---------YAB1       --   cagatgggttttcaaaaatctcatcttttttcttaacaagtaatcatttttatccatctcaagtctctgttgaattttctatgattttgtctctgattgt  9538700                                                         ------>ZmHOX2a(2)                                                       <---------ARR11(3)                                                       --------->ARR11(3)          --------->YAB1                            <---------WOX13(1)               <---------YAB1          -------->HAHB4                   --------->LBD16                         --------->YAB1         --------->ICU4                   --------------->AGL15                 --------->WOX13(1)         <---------YAB1                   <---------------AGL15               --------->WRKY18(1) --------ARR14(2)                        <-----------------AGL1             <------MYB46(1)    <----- ------->ARR14(2)      <---------ZAT6    <-----------------AGL2             <------MYB83    <-------- ------->GLK1(2)   --------->ZAT14       ----------------->AGL2            --------->MYB59--------->ATHB12 ----->TEIL        <---------ZAT14       <-----------------AG    <---------ANAC46 <---------ATHB12   gaatctgggtaatgatcaaactgtagtattagttactaacatttccccaaatggattgatctctctgatgtgtttgtttggtcaatcaaaattgatttct  9538800  Previous    Next  AGI:  At3g26100.1    Description:  regulator of chromosome condensation (RCC1) family protein. similar to regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT3G15430.1); similar to regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT3G15430.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42464.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77314.1); contains InterPro domain Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091) Range:  from: 9538274    to: 9541690    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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