Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------->GAMYB                       --------->MYB46(3)                                        --------->ANAC58                      --------->ANAC58                                           --------->ANAC58                      --------->ANAC58                             --------->GLK1(1)                    --------->MYB46(3)                             <---------GLK1(1)                 ----------->HVH21                  <-------TEIL  <---------ARR11(3)               --------->At4g35610   ------->TEIL --------->YAB1 <------ZmHOX2a(1)        ---------->ID1 ----------GT1 <---------At4g35610  <---------CCA1(2)       <-----------GT1   ---------->DOF2<-------   ttttcatttctctatggaactgacaaccaaaaacatttgaatcttgaaacaatgttcattttttacaggatatcaaggggcaaaggcaacttgttgttta  9531600                                           ----------->GT1       <---------YAB1      <---------TOE1(2)     --------->ARR11(3)   --------->ARR14(2)              <---------ANAC58          <---------ANAC58     <---------ARR11(3)   <---------ARR14(2)    --------->AHL20(2)--------->YAB1    <---------ANAC58 --ANAC46     ------>ZmHOX2a(2)        ------>ZmHOX2a(2)  <---------ANAC58          <---------ANAC46   tattgaagatgtttgatcccacttatcgaatccctctctgatctatcgaaaaaaatagtttcgagctatcatacatacttaaaatcgcttgttctgtctc  9531700                                                                                         <---------ALFIN1                                                                                         ----------->RAV1(1)                   <---------ARR11(3)                       --------->ATHB12         <---------ZAT18                   --------->ARR11(3)                       <--------ATHB1    --------->ETT(2)            ----------->GT1                                <---------ATHB12   ------>ZmHOX2a(2)           ------->TEIL                           <----------DOF2            <---------WOX13(1)    --   --------->YAB1  --------->GLK1(2)  ---------->DOF2      --------->ICU4 <---------YAB1--------->ANAC46   tctattcatcatgtatgtaaaaatctaataagagagaataaaaagagactagcttttgtcaatgattcaacttgttttgatcgacattgcaccacattag  9531800                                    --------->YAB1                                     <------MYB46(1)                             ----------->GT1                                   --------->YAB1                           <-------TEIL                                        --------->AHL20(2)    --------->DAG2         --------->ZAT14  <------ZmHOX2a(1)        --------->AHL20(1)<------MYB83   ---------->DOF2     <---------------AtSPL8               <----------DOF2<---------YAB1 ------->AHL20(2)      --------->MYB59  ---------->DOF2------>ZmHOX2a(1) <-----------GT1           <<   attaaaaaagctctaaactttgaattcggtacagaaaatcagaaaaggactcatgtcctcttcttttgaaatatgttacaataaaaatttggtttcattt  9531900                                            --------->At4g35610                                            --------->ZAT2                                            <---------ZAT2                                            <---------At4g35610                 <---------ARR14(2)  <---------SPL7                 --------->ARR14(2) <---------ANAC46              <---------ANAC46     <------NtERF2              <---------ANAC58    ------>NtERF2  <---------ANAC58              <---------ANAC58   --------->ANAC46<---------ANAC58       <---------ANAC58          --------->DEAR3(1)       <---------ANAC58          <---------DEAR3(1)                                  <---------ANAC46    <----------DOF2     --------->YAB1     ------->TEIL                          <<<<<<<<<TBF1 <<<<<<<TBF1 <-------TEIL     --------->ANAC46  <------NtERF2               <----------DOF2      ----   cttcttctttcttggtgcgttttctctgataaacgacgccgtatgaagctggcgagacacagacctctcatttcgacgctttcttcttcgtgaaactctt  9532000                                                                    --------->ARR11(3)                                          ----------->RAV1(1)       --------->GLK1(2)                                          =============================RAV                                         <----------ID1    <-----------RAV1(2)       <---------AHL20(2)         ------->TEIL      --------->HSFB2a(2)      *TSS                     <---------YAB1    <----------DOF2    <---------ARR11(3) ----->ATHB12       <---------GLK1(2)---------->DOF2<---------HSFB2a(2)<---------LBD16      ---------   catttgttttatattggaaacagagtctctcttatgaatcaaagcgacaaactttgagaaggcaggcgaaaatctcggatgggttccatcgctctgcaat  9532100                                                  <--------P                                                <------MYB83                                               --------->MYB46(2)                                               --------->MYB111(1)                                              <---------MYB55(1)                                              <--------P                    <---------YAB1                                             <---------MYB52(1)            --------->ARR11(3)                                          <-----------RAV1(2)              <---------ARR11(3)               --------->REM1(1)      <---------ANAC58                    --------->YAB1           --------->At4g35610        <---------ANAC58     <---------ARR14(2)                    ----   --------->At4g35610           <---------DAG2--------->MYB111(2)       <---------YAB1      <-------   <---------At4g35610           <----------DOF2<------MYB46(1)------>ZmHOX2a(1)          --------->ARR14(2) >ZAT14  <------ZmHOX2a(1)  <---------At4g35610--------->MYB59<---------MYB59             <---------ARR14(2)   cttggagcagaggagcttcaacttctcttcatctcctttttcgtccaggtaggtaagtgcgattcctaacttgatatgatcatatatatgagaattcgac  9532200                                                                                          <----------                                                                                     <----------DOF2                                  --------->At4g35610                             --------->GLK1(2)        <-------GAMYB  --------->ANAC55(2)                                       <---------GLK1(2) --------->ARR11(3)    <---------ANAC58                                        ----------->ARR10   <- <---------ARR11(3)    <---------ANAC58                        <---------------------WRI1<---------TOE2(3) <---------GLK1(2) <---------ANAC58               --------->ANAC58         --------->ANAC58      ---- ------>DOF2       <---------ANAC58<---------MYB52(1)       <---------YAB1 --------->ANAC46      <--- ---ID1<---------MYB46(3)   <---------YAB1        --------->ANAC58         --------->ANAC58    <-----   aaagatttttggttgaaatttgcttacttgatgatcagttggctcgaaccctaagctatatgatgctcgaagagtacaagtaagattctttaatgttgcc  9532300 -RAV1(1) ---------DOF2                --------->ZAT14                       <---------REM1(1) -->NtERF2          ------>ZmHOX2a(2)                    <----------DOF2 ------At4g35610  --------->ARR11(3)             <----------DOF2   <---------TOE2(3)            <---- ----RAP2.6(2)    <---------ARR11(3)    <---------AHL20(2)   <---------TOE2(3)         ----------->GT1   gcttcttggtccgaacagatgatctcttatactatagtctgtttattttgtcttttgggttttaagtttgatgtaagagcctcttcaagtcgtaaatcac  9532400                                                                                --------->CCA1(2)                                                                         --------->HSFB2a(2)                                                                         <---------HSFB2a(2)                                                                 <---------HSFB2a(1)     --------->At4g35610                                                                 <---------HSFC1(2)      <---------At4g35610                                                                 --------->HSFC1(2)   <------ZmHOX2a(1)                                                                 --------->HSFB2a(1)<---------TOE2(3)         ---------->DOF2     ---------->DOF2            --------->At4g35610    --------->ARR14(2) -----ANAC55(2)           ----------->GT1               <---------At4g35610    <---------ARR11(3)   ttaagaaactcaaaagagagtcacaacaaggtaaagacataggcttaagaaatgttacagatgaagaagtttcttctccaagatttgaggaagctcaagt  9532500  Previous    Next  AGI:  At3g26080.1    Description:  plastid-lipid associated protein PAP / fibrillin family protein. Identical to Probable plastid-lipid-associated protein 5, chloroplast precursor (PAP5) [Arabidopsis Thaliana] (GB:Q6DBN2;GB:Q9LU84); similar to plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] (TAIR:AT3G26070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24749.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) Range:  from: 9530011    to: 9531733    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g26085.1    Description:  CAAX amino terminal protease family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO46705.1); contains InterPro domain Abortive infection protein (InterPro:IPR003675) Range:  from: 9532006    to: 9533850    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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