Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <-------TEIL                                  --------->ARR14(1)                                  --------->CCA1(2)                                 --------->ARR14(2)                                 <---------ARR14(2)                                 <---------GLK1(2)                                 --------->ARR11(1)                               --------->ICU4                               ----------->ARR10           --------->LBD16   ==========================HOX2a_HOX2a              <---------ARR14(2)   ------>ZmHOX2a(1)         ---------->DOF2          <---------GLK1(2)      <---------At4g35610 ------->ARR14(2)     <------ZmHOX2a(2)               --------->ARR14(2)     <---------ZAT2 ----ATHB12          --------->ARR11(3)        <----------DOF2       ---------->ID1       --------->At4g35610 ->WOX13(1)          <---------ARR11(3) <----------DOF2--------->GLK1(2) <-----------HVH21<---------At4g35610   gattcctcttcttcaagtctctagatcatcgtaaagattcgacttttcactttgaagattccgaaagttttgtcccttcagctagtaatctcatctcaag  9525600                                                            --------->REM1(2)                                                            <---------ZAT14                                                            --------->ZAT14                                                       --------->At4g35610                                                       <---------At4g35610                                                       <---------ZAT2                                                       --------->ZAT2                                           --------->ANAC58--------->ALFIN1                                       ------->GAMYB <------ZmHOX2a(1)                              <        --------->ANAC55(2)           --------->MYB46(3) <---------ANAC46                      ------        <---------At4g35610         <-----------GT1<---------TOE2(3)                      -----------       <---------TOE2(3)     <---------GLK1(2)<----------DOF2                             <---------- <---------TOE1(3)         <---------YAB1  --------->ANAC58<---------ANAC46            <-----------GT1   cttatggtttaggtgactagcccttgattcagattgtgtaaccacaagcttttaaggagctgtgtagaatagatagaactcaagtctacttactcttcaa  9525700        ------->TEIL    --------------->AtSPL8 -----------GT1 ---->DOF2                             --------->ATHB12                 <---------ICU4      <-------- ---->AGL15                         <---------CCA1(2)            ---------->DOF2 <----------DOF2 -----AGL15                  --------->WOX13(1)          --------->CCA1(2)       <---------DAG2   agtaactatgtactcaatagttctgtagtatcaatcttgtatcatttgtatacatagagatttgaaataaagaattatgtctacttttcaatttctcatt  9525800                  --------->ZAT14                <---------YAB1        <---------------AGL15        --------------->AGL15       <---------ANAC58                 <----------DOF2                                            <-    <----------DOF2                ---------->DOF2                  ------>NtERF2               <---- -YAB1 <---------ANAC58   <------ZmHOX2a(1)      <-----------GT1   --------->DEAR3(1)         <------   gtgtttctttcttgaattagtatagacaggaacatggcaaagctttctgttttacatttgttttaaacgacgacgttttggtatgatgttgtgatgttgt  9525900                                                                               <-----------ARR10            <---------PCF2                                                     <---------ARR14(2)         --------->ALFIN1                            <---------ZAT14           --------->ARR14(2)       --------->ALFIN1                     <---------CCA1(2)                  <---------ARR11(3)       <---------ANAC58                 <---------ARR11(3)                     <---------ARR11(1)       <---------ANAC58                 --------->ARR11(3)       <---------ANAC58       <---------ANAC46                 --------->GLK1(2)        <---------ANAC58       <---------DAG2    <---------AtMYB61                   <-----------ARR10        <---------ANAC46     <---------At4g35610 --------MYB46(3)            --------->ALFIN1        --------->ZAT14  *TSS     --------->ARR11(3) -------RAV1(1)      <-----------HVH21 --------->CCA1(1)     <------------CBF <---------CCA1(2) ---ANAC46 ----------->TCP11(1)        --------->RVE1(1)   <---------YAB1<-----------GT1<----------DOF2   gttgttgtggtgtgggcctctcgtttcagaggtgagagaaaaaatcttatctctgtggactgtgattgtgtgatgtttccatatcttcagcttttcttct  9526000                                                                                       --------------                                                                                   <---------ALFIN1                                                                                  --------->ZAT14                                                                                 <---------ALFIN1                     --------->REM1(2)                      <----------DOF2      --------->AtMYB61                   ------>ZmHOX2a(1)                <---------At4g35610         --------->ANAC46              --------->ANAC58                    --------->REM1(1)             --------->ANAC58              --------->ANAC55(2)               <----------DOF2                 --------->ANAC58              <---------ANAC55(2)    --------->AHL20(2)   ------>ZmHOX2a(1)   --------->ANAC58              --------->ANAC58 ----------->GT1--------->At4g35610             --------->ANAC46            <-----------GT1  ---------->DOF2  <---------At4g35610             --------->ANAC58           <---------ATHB12<------ZmHOX2a(1)<---------RAP2.6(2)             <-----------GT1   actacatgctctaatcacgtccttgtagaggaaaagaaaaaaaatggctgcttcatcttcctctttcactctctgtaatcacaccacacttcgtactctc  9526100                                                        --------->GLK1(2)                                                    --------->YAB1                              <----                                                   --------->At4g35610        --------->ANAC58  <----                                                 --------->YAB1               --------->ANAC58  -----                                    --------->At4g35610 <-----------ARR10   <---------ALFIN1    -----                ---------->ARF1     <---------At4g35610<---------GLK1(2)   --------->ZAT14      <----     ---------->DOF2--------->AtMYB61      --------->ANAC46               <---------ALFIN1     <----- ->AtSPL8      <-----------HVH21<-----------GT1<---------ARR11(3) <----------DOF2       --------->YAB1   cctctgagaaagacccttgtcaccaaaacccaattttcagttcccacaaaatcatcagaatctaacttctttggctccacactcactcactcatcgtata  9526200                                                                                         <------MYB83                                                                                         <---------ANAC58                                                                                         ----------->GT1  --------->LBD16                                                                        <------MYB46(1) -------ARR10                                                                           --------->MYB59 -----ARR11(3)                                                              <---------ANAC58 ---->ARR14(2)                                <-------TEIL                  <---------ANAC58  ------- ---->ARR11(3)                            --------->ANAC58           <---------WOX13(1) <---------MYB46(3) -----ARR14(2)         ---------->DOF2    --------->ANAC58     <---------AtLEC2       <---------MYB52(1) ----CCA1(2)  ------>ZmHOX2a(1)   <---------ICU4     --------->HSFB2a(2)<---------GLK1(2)<---------ANAC58   tctccccagtctcttcctcttctctcaaaggcttaatctttgccaaggtacatttctcgactcttgcattgatagattgtttgctacagttgggtaacaa  9526300     --------->LBD16    --------->HSFB2a(2)                                                                          ----    <---------HSFB2a(2)                                                                       -------   <---------LBD16             <---------ATHB12                                               <------ <---------AGP1           >>>>>>>>>>>>>>>>>LFY       --------------->AtSPL8              <---------YAB1 -->MYB46(3)      <----------DOF2           --------->GLK1(2)    <----------DOF2       <-----------GT1   ctagttctgggaattagcttctttgttagaccaatgttttttggacaatctaagttctgttccatttcttttttatatgtttttgagtattacgatataa  9526400      --------->ANAC58      --------->ANAC58   <-------TEIL ----->ICU4             --------->CCA1(2)               ----------->GT1             --------->AHL20(2) -->AHL20(2)         --------->MYB59       --------->YAB1    --------->ICU4         <---------AHL20(2) ---AHL20(2)   <---------GLK1(2)  --------->ICU4   ---------->DOF2    <----------DOF2         -------   atattagcaagacaatagattgttagatacacagccatttttgaataagaaacaaaagatgtaaatattgggttttaagtctgaatttaaatgttataag  9526500  Previous    Next  AGI:  At3g26050.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14633.1); contains InterPro domain Targeting for Xklp2 (InterPro:IPR009675) Range:  from: 9523019    to: 9525789    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g26060.1    Description:  ATPRX Q; antioxidant/ peroxiredoxin. Identical to Peroxiredoxin Q, chloroplast precursor (PRXQ) [Arabidopsis Thaliana] (GB:Q9LU86); similar to 2-cys peroxiredoxin, chloroplast, putative [Arabidopsis thaliana] (TAIR:AT5G06290.1); similar to Peroxiredoxin Q, chloroplast precursor (Thioredoxin reductase) (GB:Q6QPJ6); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 9525970    to: 9527611    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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