Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                   --------->YAB1                                                                                   --------->TOE2(3)                                                                                 <---------YAB1               --------->AHL20(2)                                                <---------TOE2(3)               <---------AHL20(2)                      <---------ICU4           --------->YAB1              --------->AHL20(2)                       ---------->DOF2          --------->AHL20(2)          <---------AHL20(2)        ---------->ID1  --------->YAB1          --------------->AGL15      ----------->GT1   ---------->DOF2    <---------AHL20(2)    <-------TEIL   <---------AHL20(2)  -   gtaatctcatgttaaatttaaaaacaaaaagaatttttgtcatatttttttttttcataaagacagtttcattactctctattaatattaattaagcact  9522600                    --------->ZAT18                    --------->ZAT14                    <---------ZAT18                    <---------ZAT14                  <---------ZAT18                  --------->At4g35610                             <---------YAB1    <---------AHL20(2)                                            --------->ICU4   <---------AHL20(1)                                           <---------ICU4             <------ZmHOX2a(1)   --------->AHL20(1)           --------->TOE2(3)               --------->YAB1       ---------->DOF2   --------->AHL20(2)        <---------CCA1(2)                 <---------YAB1 --------->AHL20(1)   <---------AHL20(2)      --------->YAB1 ---------->DOF2<---------ZAT6       <---------AHL20(1)    - -------->YAB1    <---------At4g35610--------->ZAT6  <---------YAB1    <-----------GT1    <----------ID1   aaaaataaaatttaacttggagcacactctcataacttaatactaaaagtttaatattagtgtttattattattaactaatatttttaaaagaggacaac  9522700                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              <------                 <---------WOX13(1)                                                         -------->HAHB4               <---------ICU4          <---------AHL20(1)                                   <--------ATHB1               --------->ATHB12        --------->AHL20(1)                                   ---------              <---------YAB1           --------->AHL20(2)                                   <--------HAHB4            -------->HAHB4             <---------AHL20(2)                                   ---------            --------->YAB1          --------->YAB1                                          <--------           <---------YAB1          <---------YAB1                   <-----------GT1        --------->ICU4           --------->ICU4          --------->ICU4                 --------->AHL20(2)       <---------ATHB51         --------->YAB1       --------->ANAC46                --------->AHL20(2)           <---------YAB1         <---------ICU4       --------->ANAC58                <---------AHL20(2)      --------->ANAC46        --------->ICU4        <---------ANAC55(2)             <---------AHL20(1)      --------->ANAC58      --------->YAB1          --------->ANAC58                --------->AHL20(1)      --------->ANAC55(2)      --------->TOE1(3)       --------->ANAC55(2)          --------->YAB1             --------->ANAC58      --------->TOE2(3) <---------ANAC58                  <---------YAB1              <---------ANAC55(2)   <-----------GT1      <---------ANAC58                  --------->ICU4              --------->ANAC55(1) <---------KAN4(2)      <---------ANAC46                --------->YAB1               <-------TEIL -------->YAB1--------->ICU4  --------->ANAC55(1)     --------->AHL20(2)      --------->AHL20(2)   aagaataaccataatgataattgatagcttatacgtaataataaaatatagttcaaaataataataaaataaacattctataaaatatacgtaataatta  9522800 --->YAB1 ----AHL20(2)                                                                      <---------------AGL15 --->AHL20(2)                                                               <---------AHL20(1) ---YAB1              --------->ANAC46                       ----------->GT1<---------AHL20(2)     -- >ATHB51            --------->ZAT6            --------->ANAC46              --------->AHL20(2)     <- >YAB1       --------->AHL20(2)               --------->ANAC58      <-------TEIL   --------------->AGL15 -ICU4       --------->YAB1--------->YAB1     --------->ANAC58 --------->AHL20(2)  ==================   tatacaattagataataaaaaaacactaaacatagttcaaaacaaaacaaggaagattagaaaatgtaaatacattattttatttctgtaaacagtagta  9522900               -------->HAHB4               <---------ICU4               --------->ATHB12              <---------ATHB12           <---------AHL20(2)          --------->AHL20(2)          <---------AHL20(2)       --------->ATHB51                                   --------->AHL20(2)       <--------HAHB4                                    --------->AHL20(2)       <--------ATHB1                                    --------->YAB1       -------->HAHB4                              <---------ANAC46       <---------ICU4                              <---------TGA2(1)       --------->YAB1                              <---------ANAC55(2)      <---------ATHB51                             --------->ANAC55(2)      --------->ICU4                               --------->TGA2(1)      --------->AHL20(2)                           --------->bZIP60(1)          <---------ANAC46      <---------YAB1                               ----------->GT1           --------->ALFIN1    --------->YAB1          --------->At4g35610    <---------bZIP60(1)       <---------MYB52(1)   <---------AHL20(2)------------>CBF             ----------->STF1          <---------SPL7  --------->AHL20(2)<---------------AGL15   ----------->TBP --------->YAB1  <-------GAMYB ------->AHL20(2)   --------------->AGL15 --------->HSFB2a(2)              <---------MYB46(3)-------- --------AHL20(2)  ----------------->AGL3 <---------HSFB2a(2)  --------->MYB52(1)       --------->AHL20(2) ===================================MADS_MADS   ----------->TGA1       --------->ALFIN1 <---------AHL20(2)   tatatataataattaaatgattccacaattagatgaaacgttttctataaatgacgtaataaaaataagggaagtggccgttggggaaatttaaatcata  9523000                                                                                               <-----                                                                                            ---------                                                                                           --------->ARR14(2)                        --------->CCA1(2)                                                  <---------GLK1(2)                        --------->GLK1(1)                                             --------->MYB52(1)                       <---------ARR14(2)                                             ----------->RAV1(1)                       <---------GLK1(2)                                             --------->AtMYB61                 <----------DOF2                           <-----------GT1          --------->MYB46(3)               ------>MYB46(1)                         <---------ARR11(3)         --------->ARR14(2)               ------>MYB83            ---------->DOF2 --------->ARR11(3)         <---------ARR14(2)             <---------MYB59  ------>NtERF2            <---------GLK1(2)      --------->At4g35610    <---------ZAT6 *TSS--------->ARR14(2)    --------->At4g35610              <---------At4g35610---- ->YAB1      <---------MYB111(1) ---------->DOF2--------->MYB52(1)     <---------GLK1(2)   <---------ARR14(2)   tgcttagagttcggacctactttcagatttgcagccaaagaaaaagaagctaacaaagatttttcagttttcagtttctcagcgaaaccaccagatttgg  9523100                                                                          --------->ANAC46                                                                     <----------DOF2        <---------TOE1(3)                                           ------>ZmHOX2a(2)        <---------TOE2(3)                                          <------ZmHOX2a(2)              ---  <---------AHL20(2)                                              --------->ARR11(3)             ---- --------->AHL20(2)                                               <---------ARR11(3)             <--- ----LBD16              --------->LBD16                   <---------ANAC58--------->ANAC58       <--- >CCA1(2)           ------>ZmHOX2a(2)           --------->GLK1(2) --------->AGP1--------->TOE1(3)<--- ------->GT1  <-----------GT1        --------->AHL20(2)   <---------ANAC58--------->ANAC58       <---   ggataaaattagggtttttcgatctccagagaaaacaaaaaaaatgggagaatcaatttgtcttgtgagatctttctcgcaaccttcagagttttcatcg  9523200 ------>LBD16 ------->GT1                                                 <---------YAB1 ------ANAC58             --------->GLK1(1)                --------->YAB1                        <--- ------ANAC46            <---------ARR11(3)               <---------YAB1       <---------ANAC58  ---- ------ANAC58<--------P  --------->ARR11(3)         <---------TOE1(3)          <---------ANAC58------ ------ANAC55(2)       <---------TOE2(3)            <---------TOE2(3) <---------WOX13(1)    <--------   cgtgaaatcaacgaggttagtgcttaagatttctaaatctacaatcttggatttagggttttgataatagagattgattttgctagtgaaatttctgtgt  9523300                                                                   <---------ARR14(2)           -----                                                                   --------->ARR14(2)           <----                                                                <---------MYB59                 <----                                                            <---------SPL7                      <----                                                          <---------------AtSPL3               <-----                                                          --------->ALFIN1           --------->YAB1                                                         ------->PIF5          --------->ANAC55(2) --                                                         <-------PIF5          --------->ANAC58------                                                        <------MYB83           <---------ANAC55(2)<--    <-------GAMYB                                       <------MYB46(1)        --------->ANAC46------   --------->ALFIN1                                     <---------ZAT2         --------->ANAC58------ <---------ANAC46                     <------MYB46(1)   <---------At4g35610   <---------LBD16  ------ ------ZAT14                          <------MYB83     --------->MYB111(1)   --------->MYB52(1)<----- ----->ZAT14               --------->GLK1(2)           <---------MYB46(3)   <---------SPL7     ------ --->REM1(2)    ------->TEIL    <---------TOE2(3)      --------->MYB55(2)  <---------ANAC58   <------ -ANAC46        --------->GLK1(2)  --------->CCA1(2)  <-----------RAV1(2)  <---------ANAC58  <-------   atagtgtgttgtttgatgaatctgaagagaatttgagatttggtttttggtttttggcaggtggtaccgaatcgagtgcttacggaatcagtatcgtttg  9523400  --------->CCA1(2)  <---------GLK1(1) --------->ARR14(2) --------->ARR11(3) --------->ARR11(1) <---------ARR11(3) <---------ARR14(2) ------>GT1 -----ANAC46 --MYB83 --MYB46(1) ----AtMYB61 --------->ARR10 --->MYB111(2)                                            <---------ANAC58 ------P                                                  <---------ANAC46 --->MYB55(2)                                        ----------->GT1 --->MYB59              <---------DEAR3(1)         --------->GLK1(2) --->MYB111(1)         --------->ALFIN1           <---------GLK1(2) ----MYB46(3)        <---------ANAC46          --------->YAB1                                     <-- --->MYB46(2)        <---------ANAC58   <----------DOF2<---------MYB52(1)                         --- ---MYB55(1)         <---------ANAC58 --------->At4g35610 <---------ANAC58            ----------->RAV1(2) --MYB52(1)    --------->ZAT6         <---------At4g35610--------->MYB52(2)       <---------------AGL15   gtagatatgcgaatgaaacactagcgtgggcgagatggtcagcttttactcagaatcgttacttggaagaggttgagaggtttactaaacctggttctgt  9523500  Previous    Next  AGI:  At3g26050.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14633.1); contains InterPro domain Targeting for Xklp2 (InterPro:IPR009675) Range:  from: 9523019    to: 9525789    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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