Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                                                                              -------                                                                                        <----------DOF2                                                                                     ------->TEIL                               --------->ZAT18    <----------DOF2                    <---------ARR11(1)                     --------->AtLEC2     <---------ARR14(2)                         --------->ARR14(2)            --------->YAB1 <---------ICU4 --------->ARR14(2)                         <---------ARR14(2)         <----------DOF2  <---------ARR14(2)     <---------DAG2                     <---------ARR14(1)       <---------At4g35610--------->ICU4 <------ZmHOX2a(1)            --------->YAB1<---------CCA1(2) ------->YAB1 <---------YAB1   <---------ZAT18 ---------->ID1  <-------GAMYB --------->AHL20(2)   ttcatcttctgctttcatgatacctgcaaatattgcacttataggatttggccttttgtattttcagttgtatcagaaaaaaaatcgtatctttataagc  9518200                                                                    <---------MYB46(3)                                                                    <------MYB46(1)        <----------DOF2                                             <------MYB83                <----       <---------DAG2                                           <-----------RAV1(1)         --------- -->ANAC58                  <---------TOE2(3) ---------->DOF2------>MYB46(1)                <-------- -->ANAC46       --------->DAG2         <---------GLK1(2)    ------>MYB83             <---------AtMYB61 -->ANAC58      ---------->DOF2       ------->GAMYB        <---------MYB59   <---------ARR14(2) <----   aaaaaaacaccttttaaaaaaagtttttttaagttttcaacagaaactcaaagagagaagaccaaattgttggtttgagtattttgggtttgtggatttg  9518300                                     ------>ZmHOX2a(2)                                   <---------ARR14(3)                                   --------->ARR14(2)                                   <---------ARR14(2)                                   --------->ARR11(3)                                   <---------ARR11(3)                                   --------->AGP1                                  --------->RVE1(1)                                 ----------->ARR10                               ---------->DOF2                  <------MYB46(1)                        <---------GLK1(1)          ------>ZmHOX2a(2)                        --------->GLK1(1)         <------ZmHOX2a(2)                      =====================HOX2a_HOX2a          <------MYB83                      ===================================HOX2a_HOX2a       --------------->AGL15                      <------ZmHOX2a(1) <---------AtLEC2      <--------P   <---------------AGL15                      ====================================HOX2a_HOX2a     <-----------------AGL3                      ======================HOX2a_HOX2a     --------->MYB55(2) --MYB83           ========================HOX2a_HOX2a      <---------MYB46(3) >ARR14(2)         <------ZmHOX2a(1)<------ZmHOX2a(2)       --------->ATHB12 -ARR14(2)         =========================HOX2a_HOX2a<---------ZAT14  ------->TEIL   <---------YAB1 --MYB46(1)     <---------HSFB2a(2)--------->ARR14(3)  --------->ZAT14 <---------CCA1(2)   gttacgaactccataagtctaggaggaactctgaaaagatcttcatggagagatcggtttagtggttggatttgaatcttttaatggttatgacttcaac  9518400                                      ----------->GT1                          <---------ANAC58                          <---------ANAC46                 --------->ARR11(3)<-----------HVH21                                    <----------DOF2           <---------ETT(2)    <---------ANAC58                                     ------>ZmHOX2a(1)           --------->ETT(2)    <---------ANAC58                                  ------>MYB83       <<<<<<<<<TAC1      <---------ANAC58                     --------->ARR11(3)------>MYB46(1)   taaaaaaacactgtcgagagatgttgtttcttgtcttggtcagtgaaaattttctctggtcttagggtcttctctcagtcaccatcctctctttctatct  9518500                    <----------DOF2                                 --------->YAB1                  <                   <---------ICU4                                  <---------YAB1             <<<<<<<        <-----------GT1                                 --------->ANAC58                    <xxxxxxxx       --------->ZAT14                             --------->MYB52(1) ---------->DOF2      <<<<<<<<<TBF1      <----------DOF2                             *TSS  --------->ANAC58          <----------DOF2<<<<   ctctctctctttactctctaatctttatccattctctctcttcttctctatgccaacgaagcaatagctatgaaaagctaaaccctttccttcttcttct  9518600                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           <---------ARR14(3)                                                                           --------->ARR11(3)                                                                           --------->ARR14(3)                                                                           <---------ARR11(3)      <<<<<<<<<TBF1                  <---------WRKY18(1)                   <---------AGP1   <<<<<<<<<TBF1            <---------ANAC58                   <-------TEIL<---------ARR14(2)  <----- <<<<<<<<TBF1               <---------ANAC46               <---------YAB1  --------->ARR14(2)  ------ <<TBF1  <<<<<<<<<TBF1      <---------ANAC58     <---------ANAC58          --------->AGP1   <-------- xxxxxxxxxxxxxxxsmallRNA(se3)       ----------->HVH21<----------DOF2      <---------CCA1(2) --------- <<<<<TBF1            <---------TOE2(3)          <---------ANAC58   --------->WOX13(1)   <---------PCF2   tcttcttcttcttcttcgattgtttagattacttgggtttgacccaagtttgcttctttctatgattcatcaatctagatcttgctatctgggtccagaa  9518700                                    <----------DOF2       <-----------HVH21             <---------ANAC58     --------->ANAC46        <-----------GT1           --------->HSFB2a(2)              <---------ANAC58   <-----------GT1        ----------->GT1              <---------HSFB2a(2)         <----------DOF2 ----ARR14(2)            --------->DAG2    <---------AHL20(2)                 ---------->ID1 --->ARR14(2)           ---------->DOF2   <---------AHL20(2)               <---------DAG2<----------DOF2 -HSFB2a(2)       <---------YAB1   <---------DAG2    ----------->RAV1(2)   <----------DOF2      <---- >HSFB2a(2)     --------->YAB1  <-----------GT1 <-----------GT1          <------------------------ANAC81   acgattcacgcgcttcattcatgatataaagttactaccttttttttattttaccttctgggtcatggttttgtctgcttttcgtcttttgcttttgtct  9518800                                                                ------>ZmHOX2a(2)                                                              --------->ARR11(3)                     ------>ZmHOX2a(2)                        <---------ARR11(3)                    <------ZmHOX2a(2)                     --------->At4g35610        <---------ICU4     <---------YAB1                 <---------At4g35610        <---------GLK1(2)--------->YAB1             --------->ALFIN1             <---------ARR11(3)     --------->YAB1<---------ARR11(3)             <---------ANAC58           <-----------GT1    <-------TEIL   --------->AGP1                 <---------ANAC58      --------->ALFIN1 -----HSFB2a(2)    --------->ARR11(3)             <---------ANAC46   <------ZmHOX2a(1)   ggatgattcataatctctcgagatctattatgttcacaagagttgttcttatgcgtggtgagatgatcttaggagtgtttcactatctttcttcaattcg  9518900                             <-----------ARR10                             <---------ARR14(2)                             --------->ARR14(2)                                                  <---                             --------->GLK1(2)                                                   ----                ------>ZmHOX2a(2)                                                                <---               <------ZmHOX2a(2)                                                                 <---              --------->ARR11(3)                                                                 ----              <---------ARR14(2)               <------ZmHOX2a(1)                      <---------GLK1(2)              <---------ARR11(3)    ------>ZmHOX2a(2)                                 <---------ARR14(2)              --------->ARR14(2)    ==================HOX2a_HOX2a                     --------->ARR14(2)              --------->AGP1<---------GLK1(2)<---------TOE2(3)                    <---------At4g35610             --------->GLK1(1)     --------->At4g35610                    --------->ARR11(3)     ----             <---------GLK1(1)     <---------At4g35610                    <---------ARR11(3)<--------   ggtttttagtttctgagatctgtttttgaagaatctgatctgagtttgaggaagtttgactaaatagatcgaagaagatgtttaagcagatacttgggaa  9519000   ------>ZmHOX2a(1) ------At4g35610                                                              --------->ALFIN1 ----->At4g35610                                                           --------->ALFIN1 ------HSFC1(2)                                                           <------ZmHOX2a(1) ------HSFB2a(1)                                                        --------->ALFIN1   --------->ANAC58 ----->HSFC1(2) --------->At4g35610                               <---------ATHB12         --------->ANAC58 ----->HSFB2a(1)<---------At4g35610    <---------ARR14(2)       --------->WOX13(1)         --------->ANAC46 -------------WRI1                ----------->GT1              --------->MYB46(3)       -------------   gcttcctaagaaaacttctgctaagttttgggataatggtgaatcccaaactctagataacaacaacaatcaaggaggaggtgatgaagttttaagccag  9519100  Previous    Next  AGI:  At3g26020.1    Description:  serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative. Identical to Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform (B'ETA) [Arabidopsis Thaliana] (GB:Q9LU89); similar to ATB' GAMMA, poly(U) binding / protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT4G15415.1); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative [Arabidopsis thaliana] (TAIR:AT1G13460.1); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative [Arabidopsis thaliana] (TAIR:AT1G13460.2); similar to unnamed protein product [Vitis v Range:  from: 9514933    to: 9518106    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g26030.1    Description:  ATB' DELTA (Arabidopsis thaliana serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta); protein phosphatase type 2A regulator. Identical to Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform (B'DELTA) [Arabidopsis Thaliana] (GB:Q9ZQY6); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative [Arabidopsis thaliana] (TAIR:AT3G26020.2); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative [Arabidopsis thaliana] (TAIR:AT3G26020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14623.1); contains InterPro Range:  from: 9518550    to: 9520796    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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