Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->AHL20(2)      --------->AHL20(2) -------->ANAC58 -------->bZIP60(1) ---------bZIP60(1) -------->ANAC58 -------->bZIP60(2) -------->ANAC46                                          --------->DAG2 -------HVH21     <-------TEIL                           ---------->DOF2 --ANAC58  <---------AHL20(2)                    --------->AHL20(2) --ANAC58--------->AHL20(2)   ----------->GT1    <---------AHL20(2)           <-----------GT1       <   tcacgacataaatttatatatacatatatatgaagtatatttgaaatctatttaaaaaaaaaagtcatagatgagtcgatttaccaatagaaactacaaa  9503900                                                                                               <-----                                                                                           <-------MYC3                                                                                          <---------O2                                                                                     <-----------GT1                                                                               ----------->GT1 <-----                                     <---------WOX13(1)                       ----------->GT1  <-----                                   --------->ATHB12       ---------->DOF2   ---------->DOF2------->MYC3 -----------GT1 ---------->DOF2   <---------YAB1        <---------YAB1   <----------DOF2  --------->O2   atttacctttcaacacttaaaaggcttcttaaaattttgattgatgcttcattcgtttatcaaagagacatacggcttaaaagttaaaaaccacatggcg  9504000                                                                           <---------ANAC46                                                                   <---------AHL20(2)          --------->SPL7                                       <---------AHL20(2)         <---------MYB52(1)                                   --------->AHL20(1)        --------->AHL20(2)       <---------ANAC55(2)            <---------AHL20(1)      <---------AHL20(1)     <----------DOF2    <---------ARR14(2)                <---------AHL20(2)    <---------AHL20(2)       <---------------AGL15    --------->ARR14(2)                --------->AHL20(2)   --------->AHL20(2)<---------ANAC46 ----ANAC58                          --------->AHL20(2)   <---------YAB1   <------MYB46(1)  --------- ----ANAC58                  <----------DOF2         ----------->GT1       <------MYB83 <---------AHL20(2) ----ANAC46                ------->TEIL            ---------->DOF2--------->AHL20(2) --------------->AGL15   agtctaaatccgtatggcagaaaactatggacttttctattaaatttttaaaacaaagttattatatatttaatatttggtgtatttcttttaaatgtaa  9504100                           <<<<<<<<<<<<<<<<<LFY                           <-----------GT1                           --------->YAB1                          <---------YAB1                        <---------ICU4                        <--------HAHB4                        -------->ATHB1                        -------->HAHB4                        --------->YAB1                        --------->ATHB51                       --------->ICU4                       <---------ATHB51                       <---------YAB1                     -------->HAHB4                     <--------HAHB4                     <---------ICU4                     --------->YAB1                     --------->ATHB51                     <--------ATHB1                    <---------YAB1                    --------->AHL20(2)                                 ---------->ID1                    <---------ATHB51                             --------->AHL20(2)                --------->AHL20(2)                               <---------AHL20(2)                --------->AHL20(1)                               --------->AHL20(1) --------->ALFIN1 --------->YAB1             <---------REM1(1)  --------->AHL20(2) <-----------RAV1(1)--------->ICU4 <---------ANAC46             <---------AHL20(2)           <------- -->GT1        --------->YAB1<---------YAB1 --------->ARR11(3)--------->YAB1      <---------YAB1    -   aatgtgttgcaaaccaaaaataataattattacaatggtttgtagagatgttgctattggctaaaaataatttgttgtttttttatatttgatattttaa  9504200                                                                                               ------                                                                                             *TSS                <---------AHL20(2)                                                         --------->ARR14(2)                <---------AHL20(1)                                                         <---------ARR14(2)                --------->AHL20(1)                 --------->TOE1(3)                      <---------GLK1(1)           <---------ARR11(3)               <---------ARR14(2)                           <----------DOF2          --------->YAB1                    --------->ARR14(2)                         <-------TEIL         --------->ICU4                   <---------ZAT18                              <---------ZAT18         <---------YAB1           --------->AHL20(2)         --------->YAB1            --------->ZAT18   <---------HSFB2a(2)            --------->AHL20(1)        ----------->TBP          ------->PIF5 --AHL20(2)--------->ARR11(3)    --------->AHL20(2)--------->TOE2(3)                 <-------PIF5 <-- -------->GLK1(2) <------------CBF<---------AHL20(2)        <---------YAB1   <---------MYB46(3)<-----   aaattctggtaatgatattatattgtttttttaaaaaaaattagtggattcgaccttaaactataataacccaaactagccgttgcaagtgcatttccga  9504300                                                                                   ---------->ID1  --                                                                          <---------ARR11(3)    -----                                             <----------DOF2              --------->ARR11(3)   ------                                   <----------DOF2             ------>ZmHOX2a(1)  <-----------GT1<---          --------->ARR14(2)      <------------------------ANAC81         --------->AHL20(1)   <-----         <---------RAP2.6(3)     ---------->ID1              <---------ICU4  <----------DOF2   ------ --->LBD16<---------ARR14(2)    <-----------GT1      <----------DOF2     --------->CCA1(1)    ------- ----ZmHOX2a(1)          <----------DOF2 <----------DOF2  <-----------GT1--------->RVE1(1)    <------ ----LBD16<---------MYB52(1)<------------------------ANAC81<-----------GT1<---------AHL20(1) <-------   ggaagactagccgttacgctcttattcctttttttttctttttctttctttccttctttttaatccttccctcaaatatctttttttcccttcaaaatca  9504400                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                              -------                                                                                              <------                                                                                   <---------At4g35610                                                                                   --------->At4g35610                                                                     <---------ANAC46        <------- -------->DOF2                                               --------->ANAC46     <---------RAP2.3(1) ---->TOE2(3)                                           ------>ZmHOX2a(1)         <---------ATERF1(1) --->YAB1                                              --------->TOE1(3)          <---------MYB46(3) ------YAB1                                            --------->TOE2(3)        --------->At4g35610 ----ICU4                                            <------ZmHOX2a(2)          <---------At4g35610 --->ATHB12                                         --------->ARR14(2)       ---------->DOF2 -------- -->ICU4                                            <---------ARR14(2) <------NtERF2     ---------->DOF2 ---ATHB12----------->HVH21    <---------ARR14(2) --------->DEAR3(1) <---------ANAC58 --------->At4g35610 --ARR11(3)           --------->ZAT6           <-----------GT1       <---------ANAC58 <---------At4g35610   ttaaaaccctaagcgacgctgttaacacttgcgaattcaattttcaaaatcaccgatccttagactccatggcgtccaaaacagcggctgctaaagatat  9504500                --------->At4g35610                --------->ZAT2                <---------At4g35610               <-----------RAV1(1)              ------>ZmHOX2a(2)             <---------At4g35610             <------ZmHOX2a(2)             <---------GLK1(1)            <---------ARR14(2)            <---------AGP1         --------->ANAC58         --------->ANAC55(1)         --------->ANAC55(2)         --------->ANAC58                      <---------ARR11(1)         --------->ANAC46                      <---------ARR14(2)        <---------LBD16                        ------->TEIL      <---------REM1(2)      <------NtERF2     --------->ARR14(2)                       <---------HSFB2a(2)    --------->ZAT14        <---------WRKY12    <-----------ARR10                        --------->HSFB2a(2)   <---------DAG2        <-----------TGA1     <---------CCA1(2)                <---------ARR11(3)   <----------DOF2 ------>NtERF2              <---------ARR14(1)               --------->ARR11(3) ----->YAB1 --------->ARR14(2)              <---------ANAC55(2)               --------->GLK1(1) ------------------>TaNAC69(2)              --------->ANAC55(2)               --------->RVE1(1) --->ARR11(3)--------->GLK1(1)   <---------ARR14(2)                           <---------GLK1(1) -->GLK1(1) --------->ARR11(3)   --------->ARR14(2)                           <---------CCA1(1) ---GLK1(1) <-----------ARR10--------->At4g35610                              <---------RVE1(1) --ARR11(3) ------->TEIL <-----------HVH21 ------->TEIL                      <---------ARR11(3) <---- ->ARR11(3)<---------CCA1(2) <---------At4g35610                             --------->ARR11(3)<-----   catcactttacacggatctgctgccatcgtcagcgaattcttctgtacgtatcttcattttttcttagactcaatttcagatatcttcttctcgatttga  9504600                                                                                              -------                                                                                             <-------                                                                                       <---------HSFB2a(1)                                                                                      --------->ARR14(2)                                                                                      --------->ARR11(3)                                     ------>NtERF2                                    <---------ARR11(3)                              --------->ARR14(2)                                      <---------ARR14(2)                  <<<<<<<<<TBF1   <---------At4g35610     ------>ZmHOX2a(2)          --------->GLK1(1)        ---------->ID1     --------->LBD16  --------->At4g35610                      <---------GLK1(1)       <-----------GT1  ------>ZmHOX2a(1) <-----------RAV1(2)   <----------DOF2  <---------HSFB2a(2) -----TOE2(3)  <<<<<<<<<TBF1  <---------ARR14(2)        <---------ARR14(2)       --------->HSFB2a(2) -------------------ANAC81<-----------RAV1(2)           --------->ARR14(2)      <---------ANAC46   tgttttttttttccttcttcttcttcctccaggttacgctgcgaacaggtgagaattggatcggaacttttcaatttcagtgtctggaaatcttcgattc  9504700         <---------At5g28300              <---------ZAT14        <-----------GT1                   <-------TEIL        <---------ZAT14    <---------AHL20(2)     --------->ATHB12                   <---------ZAT18        <---------ANAC46 -->GLK1(2)         --------->ATHB12<---------LBD16----------->GT1       --------->LBD16 ---------->DOF2 --GLK1(2) ----------->GT1<---------MYB52(1)----------->GT1   --------->ZAT14<------ZmHOX2a(1)   tgtgatttttttacagtgaaattgattcgttattggtttctgggtacagtatattgtataatcgtgcagtttatccagaggaaagttttgtgaaagtgaa  9504800  Previous    Next  AGI:  At3g25980.1    Description:  mitotic spindle checkpoint protein, putative (MAD2). Identical to Mitotic spindle checkpoint protein MAD2 (MAD2) [Arabidopsis Thaliana] (GB:Q9LU93;GB:Q67YV5); similar to unnamed protein product [Vitis vinifera] (GB:CAO46681.1); contains InterPro domain DNA-binding HORMA; (InterPro:IPR003511) Range:  from: 9504293    to: 9505907    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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