Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <-----------GT1              --------->ICU4                          --------->ATHB12                             --              <---------YAB1                         --------->ICU4                       ------>MYB46(1)            --------->YAB1                           <---------YAB1                       ------>MYB83           <---------AHL20(2)   <-------TEIL       --------->YAB1                      ----------->RAV1(2) ----->ZmHOX2a(1)    ----------->GT1 <---------At4g35610                          --------->ANAC46 -- ------->TOE2(3)     <---------ZAT6  --------->At4g35610   <-----------GT1        --------->ANAC55(1)   tcctaaaaaacatataatgactagagtaactacatacatagctgatagctctattatgattaaaccggtttgaactctgtttacacataacctgccatac  9490100                             <---------At4g35610                   --------->MYB52(2)                                                          ------                   <---------MYB46(3)                                                          <-----                 <---------MYB52(1)                                     <-----------GT1        <-----             <------ZmHOX2a(2)                                  --------->YAB1              <--------            --------->ARR14(2)   <---------ARR14(2)    --------------->AtSPL8               ---------        <---------LBD16 <---------YAB1                 <---------------AtSPL8           --------->AHL20(2) ---->MYB83 <---------ARR14(2)   --------->ARR14(2)    <---------------AtSPL3          <---------AHL20(2) ---->MYB46(1)------>ZmHOX2a(2) <---------RAP2.6(3)    --------------->AtSPL3          --------->AHL20(2)   caactgttgaaccggatcggtttgttatgttagccgatattgaagagatagattgtagttgtacaattacaaatttacaatccaaacaaataaataaaat  9490200                                                              <---------AHL20(2)                             <-------TEIL                     --------->AHL20(2)                        --------->AHL20(2)                    --------->AHL20(1)                      >>>>>>>>>GATA-1                         <---------AHL20(1)         XXXXXXXXXXXXXXXXXXXX>MIR774B              --------->AHL20(2) <---------MYB52(2) --->ARR11(3)       ----------->GT1               --------->AHL20(2)<-----------GT1 ------ARR10     --------->CCA1(2)              <----------DOF2    --------->AHL20(2) ----ARR11(3)   <---------ARR14(2)         <----------DOF2--------->ZAT6                <---------AHL20(2) -AHL20(2)      <---------ARR11(3)      <---------ALFIN1 <---------TOE2(3)             --------->AHL20(2) >AHL20(2)      --------->ARR11(3)    --------->ANAC46  <-----------GT1                <---------AHL20(2)   ctaatcttttgaattgaagatatagataaaatacatttacacacactttgctttaaattaacaataaatttaactaacatgttttcaaattttttttttt  9490300                         <---------AHL20(2)                         --------->AHL20(2)                      <--------HAHB4                      <--------ATHB1                      <---------ICU4                      -------->HAHB4                      --------->ATHB51                      --------->YAB1                     --------->ICU4                     <---------YAB1                     <---------ATHB51                                     <----------DOF2         --------->TOE2(3)                           <---------YAB1 <-----------GT1   ----------->GT1   --------->AHL20(2)       --------->AHL20(2)   <-----------GT1               ----  --------->DAG2   --------->YAB1        --------->AHL20(2)    --------->AHL20(2)               ----- ---------->DOF2  <---------YAB1         --------->YAB1        <---------AHL20(2)               -----   gtataaagtaacattagtttataataattaaatacaagtttaataaaaaaaaattctaatttcatttttttatcggctttctaatttcatttttgtttcc  9490400                                                                                           <---------ATERF1(1)                                                                                           ------>NtERF2                                                      --------->ARR11(3)                  --------->RAP2.3(2)                             --------->ATHB12         <---------ARR11(3)                  --------->ANAC46                             <---------AHL20(2)      <---------CCA1(2)                    --------->RAP2.6(2)                            --------->AHL20(2)   <-----------TBP                          --------->DEAR3(1)                            <---------AHL20(2)   --------->AHL20(2)                      --------->ATERF1(1)                         --------->AHL20(2)      <---------AHL20(2)                --------->DAG2                         <---------AHL20(2)  <---------AHL20(2)                ----------->GT1                        <---------AHL20(2)   --------->AHL20(2)               --------->DAG2                     --------->AHL20(2)     --------->AHL20(2)               ---------->DOF2<------NtERF2   <-------TEIL      <---------AHL20(2)     <---------AHL20(1)            ----------->GT1--------->RAP2.3(1) -->ZmHOX2a(1)      --------->AHL20(2)      <---------AHL20(2)           --------->DAG2 --------->At4g35610 ---->TOE2(3)       <---------AHL20(2)  ------>ZmHOX2a(1)               ---------->DOF2 <---------ATERF1(1) ---->TOE1(3) --------->ANAC46         --------->TOE2(3)  *TSS     ---------->DOF2---------->DOF2   -   ttaaatacatttatacaccgaataaaattatttattagtttcctaaattatttatatatctctgaagaaaaaagaaaagtaaagtaaagtagccgcctca  9490500                                                           ----------->GT1                                                           <---------MYB46(3)                                                       --------->ATHB12                                                     =============================HOX2a_HOX2a                                                     ------>ZmHOX2a(1)                                                   <-----------------AG                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                 <------ZmHOX2a(1) <-----------------AGL1                --------->ARR11(3)                <---------MYB52(1)              <---------GLK1(1)                    ---------->DOF2      <---------CCA1(2)       --------->YAB1    --------->GLK1(1)                   --------->ANAC46   ------>ZmHOX2a(1)         <---------ATHB12<---------TOE1(3)                --------->At4g35610  <---------ALFIN1 --------->At4g35610       <---------TOE2(3)              --------->YAB1  --------- ----->ZmHOX2a(1)  <---------At4g35610   <----------DOF2 <---------MYB52(1)<------ZmHOX2a(2)<--------   tcctcctcgtctcttctcgttagctctctcaatgaggagcccgatttagggtttcctccattggttatatcaattcgatcatctccacaaagctctcgaa  9490600                                                                                             <-------                                                                                           <---------YAB1                                                                                         <---------DOF5.7(2)                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                           <---------------AtSPL3                                      --------->DOF5.7(2)          <---------ARR11(3)                                                          <----------DOF2          --------->ARR11(3)       --------->GLK1(2)                                 <---------ANAC58  <----------DOF2         --------------------->WRI1                                 <---------ANAC58 >HSFB2a(2)           <<<<<<<<<TBF1------->TEIL             <----------DOF2          <---------ANAC46 -HSFB2a(2) ------>ZmHOX2a(2)     <---------GLK1(2)      <---------ANAC46    ----------->RAV1(1)   gactctttcggtgatctcatcttcttcttcttgtacgaatctctcactctctcttcatttcgcgttataggggtttctccaacatttgcgtttacgattc  9490700                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                             <-------                                                                                             <-------                                            --------->ATHB12 <---------ARR14(2)              <-------                                            <---------MYB46(3) ------>ZmHOX2a(2)          <---------MYB52(1)        <---------At4g35610              <-------GAMYB   --------->At4g35610             <-------GAMYB <----------DOF2            --------->ARR11(3)<---------WOX13(1)     ----------->HVH21  <---------ANAC58 <---------DAG2<---------YAB1 ------>ZmHOX2a(2)          <---------At4g35610            <---------ANAC58 --GLK1(2)<----------DOF2   <---------AGP1<---------MYB52(1) --------->ARR14(2)         --------->MYB52(2)   tcactttttctgcttctatgaatacattttgatctgggtttttcgttgattgaagtattagctgatccgatttgacaaagtttgaaactttcgttgctta  9490800 ------->GT1 -----TOE1(3)                                                       <---------ANAC58 -----TOE2(3)               <---------ANAC58                        <---------ANAC58 -----TOE2(2)               <---------ANAC58                        <---------ANAC46 --ANAC58             <-----------GT1                         <---------TOE2(2) --ANAC46            <-----------GT1                         <-----------RAV1(2) --ANAC58        <----------DOF2                          ------->TEIL                        <------   ggttaatctcttgactagactttttatcttgcttctgtttctcaatccgattaggcgatgaactcaggttttgtgcgattgcaatttgtatatatgacta  9490900                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)                <<<<<<<<<GATA-1                <<<<<<<<<GATA-3                <<<<<<<<<GATA-4                <<<<<<<<<GATA-2                <---------GLK1(1)                                                                  <-               <---------AGP1                                  ----------->GT1                     <-               --------->ARR11(3)                            <---------ANAC58                 <------               <---------ARR11(3)                            <---------ANAC58                 <------       <---------YAB1     --------->GLK1(2)           <----------DOF2                        <------- ---YAB1--------->YAB1  <---------------AGL15       ------>ZmHOX2a(1)               <-----------GT1<-   ttgaagcttatcatatagatctcttgctaatcttggtttttaagaactgtattcctctttcaggcttgttactagcatttacaaattttcagtttgatgt  9491000  Previous    Next  AGI:  At3g25910.1    Description:  zinc ion binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24740.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65624.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Protein of unknown function DUF1644 (InterPro:IPR012866) Range:  from: 9490458    to: 9492367    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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