Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->YAB1                <--------HAHB4                <---------ICU4               <---------YAB1           <---------WOX13(1)                                                                       -           <--------P<---------TOE2(3)                                                            <--          <---------ANAC58                                                                        ---          <---------ANAC58                                                                       <---          <-------GAMYB--------->TOE2(3)                                                        -----         <---------MYB46(3)                                                                     <----         --------->MYB55(2)                                                                     -----         <------MYB46(1)         ----------->GT1                                                -----         <------MYB83<---------YAB1                                --------->ANAC58            <----- -->GT1<--------P--------->TOE2(3)  >>>>>>>>>>GT-3b                --------->ANAC58     --------->AtLEC2   aatacactagttggttgatcattaacataaacaagaagaaaaatataaaccaaaaaaaaaaaacacatcaagaaactgcttctactagttatgcaaagga  9487600                                                                               --------->DEAR3(1)                                                                              --------->RAP2.3(1)                                                                              <------NtERF2                                                                              --------->ATERF1(1)                                                                             <---------ATERF1(1)                                                                             <---------RAP2.3(1)                                                                             ------>NtERF2                                                                            --------->RAP2.3(2)                                                                            --------->DEAR3(1)                                                                            <---------DEAR3(1)                                                                           --------->ATERF1(1)                                                                           --------->RRTF1(1)                                                                           --------->DEAR4(2)                                                                           --------->ERF1                                                                           --------->RAP2.6(1)                                                                           <------NtERF2                                                                          <---------ATERF1(1)       -        --------------->AtSPL8                                            ------>NtERF2            <- -------->LBD16                                          --------->MYB52(1)--------->RAP2.3(1)    --- -------LBD16                                          --------->MYB46(3) --------->LBD16         --- --->ZmHOX2a(2)                                 ---------->DOF2    <---------HSFC1(2)             <-- ---ZmHOX2a(2)                              ----------->RAV1(1)    --------->HSFB2a(1)            <-- ---->ARR14(2)                             <---------ETT(1)        --------->HSFC1(2)             --- -----ARR14(2)                            --------->DEAR3(2)       <---------HSFB2a(1)            <-- ---->GLK1(2)                         <---------DAG2 <---------ARR14(2)  --------->LBD16         <--- ---->ARR11(3)                        <----------DOF2--------->GLK1(2)   --------->ANAC46       ----- -ZmHOX2a(1)       <----------DOF2 ------>ZmHOX2a(2) --------->ARR14(2) <---------LBD16     ---------   tccggacaacttggtactattcttttactctcactgatccctttaccgacaaaagaatccaccggtggaaatttcccggcgccgaagtacttcttcatta  9487700                                  --------->HSFB2a(2)                                  --------->HSFC1(1)                                  <---------HSFB2a(2)                                  <---------HSFC1(1)                                 <---------LBD16          ---------->ID1       --------->ARR14(2) ----->ZmHOX2a(2)              <---------ARR14(2)       ------>MYB83 -----ZmHOX2a(2)               --------->GLK1(2)        ------>MYB46(1) ------>AGP1                 --------->HSFB2a(1)        -------->P ------>ARR11(3)             <---------HSFC1(2)         --------->MYB52(1) -------ARR14(2)             --------->HSFC1(2)        <---------ALFIN1 -------AGP1            <---------LBD16               <---------MYB111(1) ------>ARR14(2)   --------->ANAC46      <---------ARR14(2)            --------->ANAC46 -------ARR11(3)  --------->HSFB2a(2)   --------->RVE1(1)         --------->ARR14(2)           ------ ------CCA1(2)    <---------HSFB2a(2)  ---------->TaMYB80         <---------ARR14(2)         -------- ------>ARR10   -------->P--------->LBD16--------->ARR14(2) --------->LBD16     --------->ALFIN1 >ATHB12  <---------CCA1(2)<------NtERF2--------->CCA1(1)  --------->ANAC46   --------->CCA1(2)------   gatcttcttcttgtctcttacccgaagccggagtttctggaaatatccgaattgcccctacccgtgaatatacacagaagagatggagcatataagaaag  9487800                --------->ZAT14                                         --------->TOE2(3)     <---------YAB1          --------->ARR11(3)                         --------->TOE1(3)  <------ZmHOX2a(2)          <---------ARR11(3)                   --------->TOE1(3) --------->ARR11(3)      ---------->DOF2                 --------->ARR14(2) <---------ARR11(3)     <---------WRKY45                 <---------ARR14(2)     ---------->DOF2 --->ANAC58     <---------ZAT14                         <---------CCA1(2)    --------->YAB1 -->DOF2        --------->ZAT18           <---------HSFB2a(2)     --------->TOE2(3)           ------- --->ANAC58    --------->ALFIN1           --------->HSFB2a(2)     <---------MYB59--------->DAG2    <-   caagatcaccattagaagtgtagtagtcaaagagcttctccattctcgagcatgagtcatatcccaaacctaaaccctaacataaagtcgtcttcttgat  9487900                    <---------ARR11(3)        --------->YAB1                                  ------>ZmHOX2a(2)        <---------ICU4                                 <------ZmHOX2a(2)       <---------ATHB12     <----------DOF2           --------->AGP1  --------->TOE2(3) --------->ARR11(3)                <---------AGP1  --------->TOE1(3)<---------CCA1(2)         <---------LBD16 -->ATHB12      <---------AHL20(2) <---------ANAC58   --------->ARR11(3) ----------GT1 --------->AHL20(2)  <---------ANAC58   <---------ARR11(3)                          ---   taaaccctaatcatcgattttatatctcttctttctgtcttgtcttctctgggttagatctatcttctatgactatttctgaagttgagagagagagagc  9488000                                                           <-------PIF5                                                           ------->MYC3                                                           ------->MYC2                                                           ------->PIF5                                                           <-------MYC2                                                           <-------MYC3                                                          <---------O2                                                          --------->ANAC46                                                          --------->O2                                                <---------AHL20(2)                                               --------->AHL20(2)                                               <---------AHL20(2)         <---------AHL20(2)                                        --------->AtLEC2  --------->TGA1a ----------->TBP <------ZmHOX2a(2)                                   =================================bZIP_DOF      --------->ANAC46                                   <----------DOF2        <---------TGA1a --------->AHL20(2)     <---                                  <---------ANAC46      <---------ALFIN1----------->TBP  --------->ARR11(3)                                  <---------ANAC58      <-----------RAV1(2)       --------->ANAC58  -        *TSS                 --------->ALFIN1  --------->AHL20(1)----------->GT1  --------->ANAC58 -- ------->DOF2    <---------ANAC46 <---------ANAC58   --------->PCF2   <-----------TBP    <---------ARR11(3)   aaaagattgaagttttgttttgtgagaagaagagtggctttcatgcaaatttaatggcccacgtgaatggttatatataaatacaagacaagatcagaga  9488100                                                                                         <---------ZAT18                                                                                         --------->ZAT18                                                                                  --------->ATHB12                                                             <---------YAB1       --------->ATHB51         <XXXXXXXXXXXXXXXXXXXXMIR837-3P                   <---------YAB1         <---------YAB1    <---------AHL20(2)                                  -------->HAHB4         --------------->AGL15   --------->AHL20(2)                                   --------->YAB1         <---------------AGL15   <---------AHL20(2)          <---------------AtSPL8   <---------ICU4        <-----------------AGL3  <---------WOX13(1)<---------ANAC58                   --------->ICU4         <-----------------AGL2 ---------CBF       <---------ANAC58                   <---------ATHB51  <---------------AtSPL8 -------->ATHB12   ---------->ID1               <---------CCA1(2)   <---------ZAT6-------->ATHB1 ------->ICU4     <-----------GT1           <-----------GT1--------->YAB1--------------->AtSPL8   <--   attgattaatttagtttttttttcgtttcattactagtacatattttcacatatctaattatgataaatagtggtatagtactattattggtgtacaact  9488200                                                  --------->AHL20(2)                                                 <---------AHL20(2)                                                <---------AHL20(2)                                                --------->AHL20(2)                      -------->ATHB1                                             <---------AHL20(2)                         <--------HAHB4                                             --------->AHL20(2)                         --------->ATHB51                                            <---------AHL20(1)                          <---------ICU4                     <---------At4g35610    <---------AHL20(2)                          --------->YAB1             <---------AHL20(2)             --------->AHL20(1)                         <---------YAB1          --------->AHL20(1)                --------->AHL20(2)                       --------->YAB1          <---------ARR11(3)               --------->AHL20(2)           <---------HSFB2a(2)       ----------->GT1  <---------SPL7 <---------AHL20(2)               --------->HSFB2a(2)    <-----------GT1  --------->At4g35610--------->ICU4                  --------->HSFC1(1) <--------- -------ANAC46--------->AHL20(2)     <---------AHL20(2)                <---------LBD16 --------->ICU4   gtgtatatacagtatattatttaagctgtacgagcatatataaaaattaatttaaaatagttttgtctcttgttctggaattgtcaagaattattacatt  9488300                  --------->GLK1(2)                 <---------GLK1(2)                                              <---------HSFB2a(2)               ----------->ARR10                                                ----------->GT1           --------->YAB1                                                   <---------SPL7           <---------ICU4                                                 --------------->AtSPL3          <---------AHL20(2)                               --------->AHL20(1) --------->SPL7          <---------YAB1                                   --------->ARR11(3) ------->TEIL      <----------DOF2              <---------ANAC55(2)  --------->AHL20(2)<---------------AtSPL8     <---------ANAC58            --------->AHL20(2)     <---------AHL20(2)<---------------AtSPL3     <---------ANAC58   ------->TEIL             <-----------GT1 <---------GLK1(2) --GT1<---------DAG2   <---------CCA1(2)     --------->YAB1<---------AHL20(1) <-------TEIL    <------   gtacattgctttataattagattctgtatctaaaattacatatacaaatataaacaatttatatattgattctttagacgtacgggaaaaacagaacttt  9488400                                   <-----------------AGL1                                   ----------------->AGL1                         ------>MYB83                        --------->MYB52(1)                       --------->DEAR3(1)                      <---------MYB52(2)                      <---------MYB55(2)                     ------>MYB83  ----------------->AG                     ------>MYB46(1)--------------->AGL15                    --------->ANAC46<---------------AGL15                   <---------MYB55(2)                   <---------MYB111(2)                   --------->MYB46(3)                   <---------MYB111(1)                   --------->DEAR3(1)                  --------->ANAC46 <-----------------AG                  ------>MYB46(1)  ----------------->AGL3                  --------->ANAC58 ----------------->AGL2                  --------->ANAC58 --------------->AGL15                  ------>MYB83     <-----------------AGL3                <---------ALFIN1   =============================================================MADS_MADS                --------->DEAR3(1) <-----------------AGL2                --------->AtMYB61  =============================================================MADS_MADS               --------->MYB46(3)-------->P              ------->TEIL     <---------MYB111(1)                                           <-------        <---------ICU4--------->MYB46(3)                                                     <-------       --------->AHL20(2)------>MYB46(1)                                        --------------->AGL15       <---------ATHB12--------->AtMYB61                                        <---------------AGL15 ----DOF2   --------->ZAT18  ------->TEIL         ------->TEIL  ---------->ID1  <----------DOF2   caaaaatcaataaatgcaccacccaccaacgtacttacccatttttggtatgaatttcaaattgttgtcgttttggagttagctttatatagatgatgta  9488500  Previous    Next  AGI:  At3g25905.1    Description:  CLE27 (CLAVATA3/ESR-RELATED 27); receptor binding Range:  from: 9487405    to: 9488008    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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