Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <-------TEIL                                                                                <---------ANAC58                                                                                <---------O2                                                                                <---------bZIP60(2)                                                                                --------->O2             ----------->GT1                                                    <---------ANAC46         <---------ALFIN1                                                       <---------ANAC58      ----------------->AGL1                                                   --------->RAP2.6(3)  <----------DOF2                                                             <---------TGA2(2) --------ARR11(3)                           <-------TEIL      --------->YAB1 ----------->TGA1 ------>REM1(1)       <---------YAB1    <---------AHL20(2) <----------DOF2   ----------->HVH21 -RAP2.6(2)----------->RAV1(2)    --------->YAB1        ------>ZmHOX2a(2)  <---------AtLEC2   -------   acatctttgccacacctgttaaatattcttggtcgataatatttgattcattttttgatccctttcatattttgtttccatgacgtctaaatacatatgt  9481700                                                                            ---------->DOF2            <---------HSFB2a(1)                                           <---------AHL20(2)            --------->HSFB2a(1)                                    <------MYB46(1)            <---------HSFC1(2)        ------>ZmHOX2a(1)            <------MYB83            --------->HSFC1(2)        <----------DOF2              ----------->GT1  <---------REM1(1)     --------->TOE1(2)               --------->TOE2(3) <---------At4g35610--------->AHL20(2)    --------->YAB1             --------->AHL20(2)<---------ANAC46 --------->MYB111(1)       --------- -->ANAC55(2)         --------->TOE2(3)   --------->ANAC55(2)     --------->MYB59  <---------TOE2(3)<   aatcgaacataagaaaattccatttcttaactataaaatcctttacatattttgtgtagctaatttagtaggtaaattaaaagttaatgtaggcatgttt  9481800                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                          --------->AHL20(1)                                                                                          <---------AHL20(1)                                                                                      --------->AHL20(2)                                                              <---------AHL20(1)     <---------AHL20(1)                                --------->GLK1(2)             --------->AHL20(2)     --------->AHL20(2)                              <---------HSFB2a(1)             <---------AHL20(2)     <---------AHL20(2)                       --------->TOE1(2)                      --------->AHL20(1)  --------->AHL20(2)                       --------->TOE2(2)               ----------->GT1   --------->DAG2   --------->AHL20(2)                      --------->ANAC46             <---------DREB2C(2)  ---------->DOF2   <---------AHL20(2)                      --------->ANAC58          ----------->HVH21   <----------ID1<---------AHL20(2)-                      --------->ANAC58 <---------AHL20(2)    --------->AHL20(2)  <---------AHL20(2) < >ICU4     --------->AHL20(2) --------->HSFB2a(1)  <---------DEAR3(1)  ---------->DOF2<---------AHL20(2) ---------AHL20(1)   <---------TOE2(3)--------->AHL20(2)     <---------AHL20(2)  --------->AHL20(2)<-   aatatgttttcgattaaaaaataaacgtaagaaaattctattttatatgtttgacggtggaaaataaattgcgaaaaggcgaattaatttaatttattcc  9481900                                                                                            ---------                                                                                            <--------                                                                                           <---------AHL20(1)                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                       <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(1)                                                                                  <---------ATHB51                                                                                  --------->ICU4   ---------->DOF2                                                                <---------AHL20(2) <------NtERF2                                                      <---------AHL20(1) --------->AHL20(2) --------HVH21                                                      --------->AHL20(1)<---------AHL20(1) -----ANAC46                                           ----------->RAV1(1)   --------->ANAC58      <- -----ANAC58    <---------YAB1       --------------->AGL15   ---------->DOF2 --------->ANAC58   ----- -----ANAC58 <---------ATHB51     <-----------GT1   <-----------HVH21       --------->SPL7 --------->AHL20(1) ----->NtERF2--------->ICU4    <---------ICU4      --------->ANAC46 <---------AHL20(2)<---------AHL20(2) ---------DEAR3(2)         <---------AHL20(2)   <-----------------------TaNAC69(2)--------->AHL20(2) --------DEAR3(1)         --------->AHL20(2)   --------->CCA1(2)   --------->AHL20(2) --------->AHL20(2)   gtcggcaaagttgaaattatgaataacatttaatatttacagattagagaaacgcgtcaacacaaaagattatattcggacgaaataatttaatttattt  9482000    <------------CBF   --------->ATHB12 <----------DOF2 >AHL20(2)                                        ----------->GT1 -AHL20(2)                                  <---------ZAT14 ----------------AGL1                       --------->REM1(2)         *TSS   <---------YAB1 ------>HVH21                               --------->ZAT14         <---------MYB52(1)----------->GT1   gacctttattgggcctaaaccgaagcccattatccaaacatataagtgtagagggaaacatgaagcatccgttgtatttttgatagggaagaaaaaaaaa  9482100                                                   <---------ARR11(3)                                     --------->GLK1(1)                                     <---------GLK1(1)         <-------GAMYB <---------GLK1(2)           --------->ARR11(3)        <---------ANAC46            --------->ARR11(3)       ------->TEIL        <---------DEAR3(1)   <---------ETT(1)      --------->ARR14(2)       <------NtERF2   --------->ARR11(3)          <---------ARR14(2)     <---------DEAR3(1)<---------ARR11(3)        ----------->ARR10  <----------DOF2 ---------->DOF2<---------AHL20(2)  <---------ARR11(3)      <---------CCA1(2)          <---------AHL20(2)   cacaaaagcggcgttgatttttttagattttccgacaagatttctcgtgagaagatttgtctgaatctttctttcgaagaggttttgagttaatttcaaa  9482200                                                           <---------ANAC46                                                         --------->ZAT18                                                         <---------ZAT14                                                         --------->ZAT14                                                        <---------ANAC46                                                      <---------MYB46(3)                                                    <-------GAMYB<---------ETT(2)                                                   --------->MYB55(2)                                                ------------>AtMYB77                                                <---------RAP2.3(1)                                               <---------RRTF1(3)<---------WRKY12                                               <---------RAP2.3(2)                                               <---------RAP2.3(3)        <---------ARR14(2)                                               <---------RRTF1(2)--------->ETT(2)                                               <---------RAP2.6(2)        --------->ARR14(2)                                               <---------DEAR3(1)----------->HVH21                                              <---------LBD16    <---------DEAR3(1)                                           --------->CCA1(2) <---------AtMYB61                               --------->ARR11(3)  <---------MYB46(3)   --------->MYB55(2)                               --------->ARR14(2)  <---------DEAR3(2)   --------->ABI4(2)          <-                               <---------ARR14(2) <---------ANAC46      <---------MYB46(3)        ---              --------->ARR11(3)           ---------->DOF2<---------DEAR3(1)                     <---              <---------ARR11(3)           <---------GLK1(1) --------->ALFIN1                    <---              --------->GLK1(2)<---------ARR11(3) <---------DEAR3(1)<---------DEAR3(1)--------->ZAT2-              --------->ARR14(2)      ---------->DOF2--------->ALFIN1  <---------AtMYB61       <-----              <---------ARR14(2)--------->CCA1(2)<------NtERF2   <---------WRKY38(1)  <---------ZAT2-             --------->RVE1(1)<---------HSFB2a(1)------>NtERF2<---------MYB46(3) -------->P   -------   atggttttggagaaaaaatctgcattgttggaagatttgataaagaaatgcggcggttgtgcggtggtcgacggtggtttcgctacccagcttgagattc  9482300           --------->MYB52(1)           <---------DOF5.7(2)      <------NtERF2     ------>NtERF2    --------->ATERF1(2)    <---------ATERF1(2)    --------->RRTF1(2)    --------->RRTF1(3)    --------->DEAR3(1)    --------->RAP2.6(2)    --------->DREB2C(2)    --------->RAP2.3(3)    --------->RAP2.3(2)   --------->RAP2.6(1)   <------NtERF2   --------->ATERF1(1)   --------->RRTF1(1)   --------->ERF1   --------->DEAR4(2)   --------->ORA47(2)   --------->RAP2.3(1)  ------>NtERF2  <---------RAP2.6(1)  --------->ABI4(2)  <---------RRTF1(1)  <---------ATERF1(1)  <---------DEAR4(2)  <---------RAP2.3(1)  <---------ORA47(2)  <---------ERF1 --------->DEAR3(1) <---------RRTF1(3) <---------DEAR3(1) <---------RAP2.3(2) --------ATERF1(1)        <---------ANAC58 ------>ANAC46------->GAMYB  <---------ZAT14 ------At5g28300          <---------ANAC58                     ---------->DOF2 ------LBD16 --------->MYB46(3)                        <---------At4g35610 -------->RAP2.3(1)     <---------ZAT14                --------->At4g35610 --TEIL  --------->DOF5.7(2)--------->ALFIN1        ------>ZmHOX2a(1) -------->ATERF1(1)<----------DOF2                ----------->RAV1(2)               <---------------- -->CCA1(2)<-----------GT1<---------ANAC46      --------->ARR11(3)     ----------->GT1       <-------   acggcgccgccattaacgaccctttgtggagtgctgtttctctcatcaaaaatcctgagctcatcaaaagggtttgtgaaaatttgtgttttttttttct  9482400                                                                       --------->YAB1                                         --------->YAB1  <---------GLK1(1)                                        <---------YAB1   --------->GLK1(1)                     <---------------AGL15 <-----------GT1            <---------YAB1                 <-----------GT1    <---------At5g28300 <---------ARR14(2)    <---------YAB1  --------->TOE2(3) --------->YAB1    --------->ARR14(2) --------ANAC81<---------AHL20(2)  <-----------GT1     <------ZmHOX2a(1)                 --------->AHL20(2) ----GT1  <---------YAB1        <---------ICU4    <----------DOF2  ------->TEIL      --------->YAB1   tcatttctgattttgattttatccctaattttgaaaattaccatgataccatctttaggatttgctatgaacatcataagttattaagcataaaaatttg  9482500                                                   <---------AHL20(2)                                                  <----------DOF2                                              <---------TOE2(3)                                              <---------TOE1(3)                                          <----------DOF2                                        <------ZmHOX2a(2)                                        <---------RVE1(1)                                       --------->ARR11(3)                                   ---------                                       --------->AGP1   --------->TOE2(3)      <---------LBD16                                       <---------AGP1  ----------->GT1   --------->AHL20(2)<---------ARR14(2)                                       <---------ARR11(3)                <---------AHL20(2)<---------ARR11(3)                          ----------->GT1------>ZmHOX2a(2)          --------->ARR11(3)     --------->ARR14(2)                <---------WOX13(1)     --------->ARR14(2)           <---------ARR11(3)     --------->ARR11(3)              --------->ATHB12         <---------ARR14(2)           <---------GLK1(2)      --------->ARR11(1)             <---------YAB1           <---------CCA1(2)<---------ZAT6<---------RVE1(1)   ----------->ARR10   attttttcttatattctgattgatattttggtgaaaacacagatctttagggttttattgttaattcgaagatttttaatttctgggtctgaagatttgg  9482600  Previous    Next  AGI:  At3g25900.1    Description:  ATHMT-1/HMT-1; homocysteine S-methyltransferase. Identical to Homocysteine S-methyltransferase 1 (HMT-1) [Arabidopsis Thaliana] (GB:Q9SDL7); similar to HMT3 (Homocysteine S-methyltransferase 3), homocysteine S-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G22740.1); similar to homocysteine methyltransferase 1 [Brassica oleracea var. italica] (GB:ABG74913.1); contains InterPro domain Homocysteine S-methyltransferase; (InterPro:IPR003726) Range:  from: 9482070    to: 9484163    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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