Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ----------->GT1    --------->ANAC46                                       --------->MYB52(1) <---------ZAT18                                        ------>MYB83 <---------ZAT14         <-------TEIL                   ------>MYB46(1)                  <-----------GT1 --------->ZAT14 <---------ARR11(3)           --------->At4g35610   ---------->DOF2     <---------AHL20(2) -----ZAT14      --------->ARR11(3)------->TEIL       <---------MYB59                   --------->AHL20(2) ---->ZAT14--------->TOE2(3)<---------YAB1  --------->MYB46(3)------->GAMYB     --------->ICU4   cagtctactccatcgttaatatctaggttcaccattgaatcttccaccagctataaccaaacaacgacgaaaaagagatgtcataactatttaactacac  9470900                 ----------->RAV1(1)                <----------ID1             ------------------------>ANAC81                                                   ------       --------------->AGL15                                                                  <------ZmHOX2a(2)       <---------------AGL15                                                                 <-------      ----------------->AGL2                                                                 --------      ----------------->AGL3                         --------->TOE2(2)                  --------->TOE1(2)      <-----------------AGL3            <---------ICU4    <---------AHL20(2)           <---------HSFB2a(1)     --------->At4g35610--------->AHL20(2)           --------->TOE1(2)            --------->YAB1 ----   aaatagcatctaaaaatagcaacaaaaaaaatcaaaaactagtcattacttagtacctatgaaattgtttccaaatgtctccaattagaaccttggatcc  9471000                    <---------ALFIN1        --------->ANAC58                    --------->ANAC46        --------->ANAC46      ----------->GT1  --------->AtMYB61    --------->ANAC58 >ZmHOX2a(2)       -------->P <------ZmHOX2a(1)                                   --------->ARR14(2) --ARR14(2)        ------>MYB46(1)   --------->GLK1(2)                            <---------ARR14(2) ->ARR14(2)        ------>MYB83     <---------GLK1(2)         <------ZmHOX2a(1)   <---------GLK1(2) -->ZmHOX2a(1)   --------->AtMYB61----------->ARR10    --------->MYB46(3)   <---------ZAT14      ----   ttcaacgatggtgatactaccaacaccaccaaggacgagattcttcaaggcattggaaccaataggaccacaattgagtaaacagatactcgcttcttcc  9471100                                                                                <------ZmHOX2a(2)                                                                     <-------TEIL                                                                   <---------ARR14(2)                                  --------->MYB52(1)               --------->ARR14(2)                                <---------ATHB12          --------->ANAC46     <---------ARR11(3)                     <---------ARR11(3)                  ==============================HOX2a_HOX2a       <---------WRKY18(1)    --------->WOX13(1)         ------>ZmHOX2a(1)     --------->ARR11(3)       >>>>>>>>>WRKY18      <---------ATHB12     <---------AHL20(2)<---------GLK1(2)      --------->WRKY12   ------>ZmHOX2a(1)      --------->AHL20(2) --------->ARR11(1) ------>DOF2   --------->TOE2(3)--------->MYB46(3)   <-----------GT1--------->ARR14(1)    --------->YAB1   aaagtcccttgacttcacctcaaaatcctaatcaatcaacgattacttcataaaatttcctcccaacaagattcgttcgaagatcgatagaataatacaa  9471200                                                                -------->ATHB1                                                                --------->ATHB12                                                                --------->YAB1                                                                <---------ICU4                     --                                                               <---------YAB1                  ------                                                   <---------ANAC58                    <---------TOE1(2)                                          ------>ZmHOX2a(2)    <---------ATHB12    ==================                                         <------ZmHOX2a(2)  ------------>ATHB5     <------ZmHOX2a(2)                                    <---------DOF5.7(2)<---------TOE2(3)          --------->ARR11(3)                                   --------->WRKY12<---------ANAC58               <---------ARR11(3)   <---------ZAT6  --------->YAB1--------->At4g35610<----------DOF2       --------->CCA1(2)<-------TEIL   atgtagagttcgaagagactaacatagtatacatgagttgacgatcgtacttggctttaggttccatcattgttagagatgagagatcatatgttcgtaa  9471300                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                <----                                                                                                -----                                         <------NtERF2                                          <----                                         --------->At4g35610                                   <-----                                         <---------At4g35610                                   ------                                       <---------LBD16                                         ------                          <-----------HVH21                                                   -------                   ---------->DOF2     --------->ZAT18                                     --------->ANAC58 --------->GT1>>>>>>>>>TBF1  <---------SPL7            >>>>>>>>>GATA-1                     --------->ANAC58 --->SPL7 <------ZmHOX2a(1)<------NtERF2 --------->LBD16                        ---------->DOF2------ ================HOX2a_HOX2a--------->DEAR3(1)    --------->YAB1         ------------>CBF  --------->ANAC46   gtcgtaaacagaggaagaagaacaagcgcgtcgtccacaagtccgcagacattaatagataaaccatgactaatccacaatccaaagttccaaacgcacc  9471400     ---------->DOF2   --------->LBD16   ------------>CBF  --------->ANAC58  --------->ANAC55(1)  --------->ANAC46  --------->ANAC58 <---------LBD16 ------->GAMYB ------>P ---->MYB46(1) ---->MYB83 --->MYB46(1) --->MYB83 -----MYB52(2)                                                                                    <-- ---->MYB46(3)                                                                         <------------CBF -----MYB55(2)                                        ------------>CBF     --------->ANAC58     <---- ---------OsCBT                                  ------>MYB46(1)           --------->ANAC58  <------- --->ANAC46     <----------DOF2                  -------->P--------->YAB1  --------->AtLEC2 <-------- --->ANAC58    <-----------------AGL3            ------>MYB83<-----------GT1  ---------->DOF2-------- >TEIL        <----------DOF2                  <---------MYB111(1)       <-----------RAV1(2)<-------- --->ANAC58 <------NtERF2                      <---------MYB59    --------->MYB52(1)------------>CBF   caacccgcaatgcccgctctttttttggactcccttatacaggcccatacctactctgcaatattactaaacgggccaggcaaaggcccaattgatatct  9471500                                                       --------->TOE2(3)                                                       <-----------HVH21                                                      --------->ANAC58       <---------ALFIN1                               ----------->GT1 ---------GT1                                         --------->ANAC58 ------DOF2                                          <-----------------------TaNAC69(2) --ARR11(3)                              <-----------RAV1(1)                       <---------ANAC58 -GLK1(1) <----------DOF2               <---------TOE2(3)                          <---------ANAC58 < ->ARR11(3)          <------------CBF <---------AHL20(2)      ----------->GT1      <---------ANAC46 - -CCA1(2) <---------DAG2      ----------->GT1      <------ZmHOX2a(1)     <----------DOF2           --   ttaccatcaacacttttttaaaacattgattttagtaaaatttatgttgtttaggaacgtcaaacgcttaaatagcttttgtttgacttgtagttttgca  9471600                  <---------ANAC58             >>>>>>>>>SARD1            <----------DOF2            --------->ARR14(2)    <-----------GT1    --------->AHL20(2)      >>>>>>>>>CBP60g          <----------DOF2 ---------AHL20(1)<---------ANAC46     --------->GLK1(2)         --------->YAB1          ---------->DOF2 -------->AHL20(1)<---------ANAC58     <---------ARR14(2)     --------->YAB1      <---------AHL20(2) ------->AHL20(2)<---------TOE2(3)    <---------GLK1(2)   ----------->GT1  <-----------GT1         --   aatatataacttctcttttgacgtataaaataaaactgaagaatctgaaatttggataacatgttaataatcttcttttaccatttttttcaaaagtatt  9471700                   <---------YAB1                 <---------ICU4                <---------YAB1                                                     <---------LBD16 --         <---------AHL20(2)                                           <---------TOE2(3)           <--         --------->AHL20(2)                                          --------->MYB52(1)           ---         --------->AHL20(1)   ----------->GT1                      <---------MYB52(2)--------->LBD16<        --------->AHL20(2)   ----------->GT1                 --------->TOE2(3)   --------->ARR14(2)<- --------->GT1  --------->ICU4<----------ID1<------ZmHOX2a(1)--------->YAB1      <---------ARR14(2)--   gtagttaaaaaaaaattgattattgtaagaaggggaaaaacatgaaggactacaagtctacaacgataaactaacgctgtctggttccggtttacagttc  9471800  Previous    Next  AGI:  At3g25880.1    Description:  auxin-resistance protein, putative. similar to AXR1 (AUXIN RESISTANT 1), small protein activating enzyme [Arabidopsis thaliana] (TAIR:AT1G05180.1); similar to auxin resistant 1 [Brassica rapa] (GB:ABV89645.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Molybdenum cofactor biosynthesis (InterPro:IPR009036) Range:  from: 9470950    to: 9471270    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g25882.1    Description:  NIMIN-2 (NIM1-INTERACTING 2) Range:  from: 9471654    to: 9472187    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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