Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->ANAC58                                                      --------->REM1(1)                                                    <---------HSFB2a(2)                 ------>MYB83  <---------YAB1       <---------------AGL15                 -------->P   <---------TOE2(3)     --------------->AGL15               --------->AtMYB61                    --------->HSFB2a(2)    --------->MYB46(3) --------->YAB1       <---------TOE1(2)                                --------  <-----------GT1------>MYB46(1)        ------>ZmHOX2a(1)  --------->ANAC58             --------->ANAC46 -----AHL20(2)--------->MYB46(3)--------->YAB1 <----------DOF2                     <---------ICU4 --AHL20(2) <-----------GT1  --------->YAB1------>ZmHOX2a(1) <---------ICU4       ------>ZmHOX2a(1)   tatataaccaatataaaccaacctttcatattgatgataatcctcctagcttttctacaacaagcattgcaatccaagttaatcctcatcacaacacaac  9461400                                                          <---------YAB1                                                        --------->ATHB12                                                        -------->ATHB1                 --------->ANAC58                --------->ANAC58                 ------>MYB46(1)                 --------->ANAC58                 --------->ANAC46          --------->GLK1(1)                                      ===                --------->ABI4(1)      --------->YAB1   --------->ATHB51                          ---               --------->AtMYB61      <---------YAB1    <---------ICU4                         <-----               <---------ALFIN1 --------->AHL20(2)     <---------YAB1                          ------               --------->DEAR3(1)   <---------ICU4     --------->ICU4                     ===========              --------->MYB46(3)<---------AHL20(2)     --------->AHL20(1)          --------->ANAC46 <---------ANAC58--------->ANAC58   --------->YAB1     <---------ATHB51  ============================ <---------ANAC58------>MYB83   --------->AHL20(1)     <---------AHL20(2)---------->DOF2 <---------DAG2 ->ANAC46   <-----------GT1    --------->AHL20(2)--------->ANAC46       --------->AHL20(2)<----------DOF2   attgcttctgcatttcaccaccccaaaaaaaaaaaaaattatcacaaatccaagaaaattattgttcaaacaaataaaagaaaacacaaaaccttttccg  9461500         ---------->DOF2                                                      <---------At4g35610       ---------->DOF2                                                       --------->GLK1(2)     --------->ANAC58                                                       <---------GLK1(2)     --------->ANAC58                                                <---------GLK1(2) =================bZIP_DOF                                           --------->ARR11(3) ------>TGA1a                                                        <---------ARR11(3) ----ETT(1)                                                        <---------TOE2(3)              --- --->ANAC46                                                  --------->AHL20(2)               ------- =======bZIP_DOF                                ---------->DOF2    <---------YAB1 <---------GLK1(2) =======bZIP_DOF                *TSS    <---------TOE2(3)    <---------AHL20(2) <---------YAB1<------   acatgagacgaaagagcaatattgtatgatatgtttttggttaagaaaacaaaagtatacttataaattaagattttggaatctgattctctaacttagg  9461600                                                                                             --------          --------->ARR11(3)               ------>MYB83                                      <------- <---------ZAT14                           ------>MYB46(1)--------->HSFC1(2)                 -------- <---------At4g35610                     <---------MYB59  <---------HSFC1(2)         ----------->GT1 --------->ZAT14                        <---------ANAC55(2)             <----------DOF2   <---------- ------->DOF2                           --------->ANAC55(2)  --------->At4g35610<---------HSFC1(1) -->MYB59 <---------ARR11(3)          <-----------GT1    --------->ANAC58       <---------HSFB2a(2) ---TOE2(3)--------->CCA1(2)       <---------YAB1        --------->ANAC58       --------->HSFB2a(2)   tagagcagagaagatatataagaaaactggttttgttatgttacctaatatccattgagaagcatctaaattttctttgtttctagatggtttaacctaa  9461700                                        <---------MYB52(1)                                       --------->LBD16                                ----------->TBP                              --------->YAB1                              <---------AHL20(2)                                                 *TSS                          <---------AHL20(2)                                                    -----                          --------->AHL20(2)<---------YAB1                              ------->TEIL                      --------->LBD16  ----------->GT1                                ------->GAMYB   --------->HSFC1(2) ----------->GT1<---------LBD16                                 --------->MYB46(3) ->TOE2(3)          <---------LBD16<---------ARR14(2)                                <---------MYB52(2) --MYB59        <---------AHL20(2) --------->ARR14(2)                             <---------WRKY12 ->TOE1(3)     --------->AHL20(2) <---------GLK1(1)                               <---------WRKY38(1) -GT1       --------->AHL20(2)--------->AHL20(2)     <--------P   <---------REM1(1)--------->MYB52(1)   accgaagtttcagataaattaatccggtttaattatatatccggttattaaactggtaactgatacaaatgtaggcgaagacgctcaacgaacttcaacc  9461800                                          ------>ZmHOX2a(2)                     <<<<<<<<<TBF1                                         <------ZmHOX2a(2)                   <<<<<<<<<TBF1                                         <---------GLK1(1)              <---------ARR14(2)               <---------ZAT14          --------->ARR14(2)             <-------GAMYB               --------->ZAT14          --------->ARR11(3)            <---------MYB46(3)               <---------ZAT18          <---------ARR14(2)            <---------DEAR3(2)             --------->ANAC46           --------->AGP1               <---------RAP2.6(2)          <--             --------->bZIP60(2)        <---------ARR11(3)           <---------ANAC46             ---           <---------ALFIN1             <---------AGP1               <---------DEAR3(1)      <-------          <---------ZAT18              <---------CCA1(2)           ------------>AtMYB77      -------- ---------------->WRI1    --------->ZAT14--------->GLK1(1)   <<<<<<<<<<<<<<<<<LFY -------------------   tcgtcttctccgtccacttcactctctctaaactctctctcagatctctctctctctgtgattcaacaatggcggtttcttcttcttcgtttctatcgac  9461900                                                                                          ------>NtERF2                                                                                          <---------ATERF1(1)                                                                                         --------->DEAR3(1)                                                                                       ------>NtERF2                                                                                       --------->LBD16                                                                                       <---------ATERF1(1)                                                                                      <---------DEAR3(1)                                                                                     <---------LBD16                                                              <------NtERF2     --------->ANAC58                                                           <---------At4g35610  --------->ANAC58       -------->P                                          --------->At4g35610  --------->ANAC46    <---------MYB52(2)                                     --------->LBD16    <---------ALFIN1 -------At4g35610                                 <---------ALFIN1         --------->ANAC46 ------>At4g35610     ----------->RAV1(1)    --------->ARR14(2)    ----------------------->TaNAC69(2) --ETT(2)         --------->ARR14(2)         <---------ARR14(2)--------->DEAR3(1)<---------ALFIN1 ->ETT(2)         <---------ARR14(2)    ------>ZmHOX2a(1) --------->ANAC46<---------At4g35610       - -->WRI1--------->MYB46(3)             --------->TOE2(3) <---------LBD16  --------->At4g35610     <--   agcttcactaaccaattccaaatccaacatttcattcgcttcctcagtatccccatccctccgcagcgtcgttttccgctccacgactccggcgacttct  9462000                              ----------->GT1                              <---------ANAC58            --------->MYB46(3)                              <---------ANAC58         --------->YAB1                            --------->CCA1(2)   <------NtERF2 <---------ICU4                           --------->ARR14(2)  ------>NtERF2 <---------ATHB12                           <---------GLK1(2)   <---------RAP2.6(3)               <-----------HVH21               --------->LBD16--------->YAB1    <---------ANAC58               <---------SPL7 <---------ANAC46<---------DEAR3(1)----------->HVH21              <---------DEAR3(2)              <---------RAP2.6(2)       --------->ANAC58           --------->MYB52(1)<-------TEIL     --------->ATERF1(2)  <---------ANAC55(2)          ----------->HVH21--------->ARR11(1) <---------ATERF1(2) --------->RAP2.6(3)<---------ANAC46          <---------ATHB12 <---------ARR14(2) <---------RAP2.3(3)--------->MYB52(1)<-----------HVH21 <-----------HVH21       <---------TOE2(3)   --------->RAP2.6(3)----------->TGA1<---------ANAC58 -------->DEAR3(1)   <------ZmHOX2a(2)       <---------LBD16-------->P  ----------->GT1 -------At5g28300--------->SPL7        <-----------GT1<---------YAB1    --------->ANAC58   <------ZmHOX2a(2)   caccgtcgttcaatgacggtccgatctaagattcgtgaaattttcatgccggcgttatcatcaaccatgacggaaggcaaaatcgtgtcatggatcaaaa  9462100                                           ------->TEIL                                      <-------GAMYB                                     --------->MYB111(2)                                     --------->MYB55(2)                                     <---------MYB46(3)                                    <--------P                                   <-------GAMYB                                  <---------MYB46(3)            <---------REM1(1)                                 <---------TOE2(3)       --------->ARR14(2)            --------->ARR11(3)             --------->ANAC58    <---------AtMYB61       <---------ARR14(2)         <-------GAMYB             --------->ANAC46  <---------ANAC46         <---------RAP2.6(3)        <---------MYB46(3)             --------->ANAC58--------->ZAT14       --------->DAG2              <---------YAB1    <----------ID1           <---------ZAT14      ---------->DOF2             <---------TOE2(3) --------->DAG2             --------->ALFIN1  <---------YAB1   ------->TEIL  <-----------GT1   cagaaggcgagaaactcgccaagggagagagtgttgtggttgttgaatctgataaagccgatatggatgtagaaacgttttacgatggttatcttgctgc  9462200                                  --------->ZAT2                                  --------->At4g35610                                  <---------At4g35610                                  <---------ZAT2                               <------MYB83                               <------MYB46(1)                              --------->ALFIN1                              --------->MYB111(2)                              --------->MYB111(1)                              <---------DEAR3(1)                              <---------AtMYB61                              --------->MYB46(2)                              <---------MYB46(3)                              --------->MYB55(2)                --------->At4g35610                             <---------MYB55(1)                 <---------At4g35610                             <--------P                         <---------ZAT2                       <---------ARR14(2)                       --------->ZAT2                       --------->ARR14(2)                  <XXXXXXXXXXXXXXXXXXXXMIR773B             ----------->GT1<---------MYB52(1)      <---------ZAT2            --------->DAG2  <-------GAMYB           --------->ZAT2        <------NtERF2 --------->ZAT2                <---------At4g35610      <---------DEAR3(1) <---------LBD16            --------->At4g35610     <------NtERF2    --------->At4g35610          --------->MYB52(2)                         -------    <-----------HVH21 <---------ZAT2             <---------MYB52(1)                          --------   --------->ETT(2)   <---------At4g35610      <---------MYB46(3)      <------ZmHOX2a(2)---------->DOF2   gattgtcgtcggagaaggtgaaacagctccggttggtgctgcgattggattgttagctgagactgaagctgagatcgaagaagctaagagtaaagccgct  9462300  Previous    Next  AGI:  At3g25855.1    Description:  metal ion binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO68044.1); contains domain PTHR22814 (PTHR22814); contains domain PTHR22814:SF13 (PTHR22814:SF13) Range:  from: 9460658    to: 9461532    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g25860.1    Description:  LTA2 (PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE); dihydrolipoyllysine-residue acetyltransferase. similar to EMB3003 (EMBRYO DEFECTIVE 3003), dihydrolipoyllysine-residue acetyltransferase [Arabidopsis thaliana] (TAIR:AT1G34430.1); similar to hypothetical protein OsI_028312 [Oryza sativa (indica cultivar-group)] (GB:EAZ07080.1); similar to Os08g0431300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061862.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain Catalytic domain of components of various dehydrogenase complexes; (InterPro:IPR001078); contains InterPro domain E3 binding; (InterPro:IPR0 Range:  from: 9461797    to: 9464024    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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