Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------YAB1                        <---------AHL20(2)                        --------->AHL20(2)                       <---------YAB1                       --------->ICU4                    --------->AHL20(2)                <---------AHL20(2)              --------->AHL20(2)            <---------AHL20(2)                                                        --------->ARR14(2)   --------->TOE2(3)<---------AHL20(2)           --------->YAB1                       <---------ARR11(3) ------>MYB46(1)--------->AHL20(2)              <---------ATHB12                      <---------GLK1(2) ------>MYB83 <---------AHL20(2)              --------->YAB1                          --------->ARR11(3) ---------->RAV1(1) <---------YAB1            <-----------GT1                         <---------ARR14(2) -------GT1 --------->AHL20(2)              <---------YAB1                  ------->TEIL --ICU4   --------->AHL20(2)              <--------HAHB4                <---------TOE2(3)<-----------GT1 ->YAB1  --------->AHL20(1)               --------->YAB1             <---------YAB1<---------TOE2(3) >ICU4   <---------ARR11(3)              <---------YAB1           <---------AHL20(2) <------ZmHOX2a(1) -YAB1   <---------AHL20(1)  --------->GLK1(2)--------->WOX13(1)  <---------YAB1 ---------->DOF2   --   accaacatcaatatatatatatataattaatattctgacaactattattaatcatactctctatgttttttattaatgtatattaaaggattttccacat  9350400                                                                                   <---------YAB1                                                                                  <---------AHL20(1)                                                                                  <---------AHL20(2)                                                                              --------->ATHB51                                                                              -------->HAHB4                                                                              -------->ATHB1                                                                              <--------HAHB4                                                                              <---------ICU4                                                                              <---------AHL20(2)                                                                              --------->YAB1         <---------YAB1             <---------YAB1                           <---------YAB1      <---------YAB1                <---------AHL20(2)                       <---------ATHB51      --------->ICU4   <---------YAB1  --------->ICU4                        --------->ICU4    --------->CCA1(2) <---------ARR11(3)                       <---------ATHB12 <---------YAB1  --------->YAB1      --------->AHL20(1)       --------->AHL20(2)         --------->AHL20(2) <---------YAB1       <---------AHL20(1)       <---------AHL20(2)         <---------AHL20(2)     <--- ------->YAB1    <-------TEIL     --------->YAB1   --------->YAB1 --------->At4g35610<---------AHL20(2)   attatgatatgattatagatgcaatatttttgtgatttataattttgaattttttataactcgaaatcatctgtatttaattattattttttgaagttta  9350500                   <---------ICU4              <----------DOF2                  <---------ATHB12          --------->ARR11(3)         --------->YAB1                     --------->AHL20(1)      --------->YAB1                        <---------ARR11(3)     --------->AHL20(2)                     <---------AHL20(1)                                 ------   --------->TOE2(3)  <---------ICU4       --------->CCA1(1)            ------>ZmHOX2a(1)   --------- <---------AHL20(2)<---------AHL20(2)      --------->RVE1(1)           --------->TOE2(3)  --------->YAB1 ------YAB1       --------->AHL20(2)   --------->AHL20(2)    --------->AHL20(2)  ----------->GT1   taattcattaaaaataactaataaatattgcattgagaacttaaaatatctttttttttgaaataaaacaattcctaaacatagagtaacaaaaataaaa  9350600         <---------AHL20(2)        <---------AHL20(1)                                                <---------AHL20(1)        --------->AHL20(1)                                                --------->AHL20(1)        -       <---------AHL20(2)                                                --------->AHL20(2)         - ----------->GT1                               <---------YAB1    <-----------GT1                   -- ---->DOF2                           --------->AHL20(2)<---------------AtSPL8                -------- >AHL20(2)    <-----------GT1 --------->MYB52(1)       --------------->AtSPL8                <-------   agagagtatatatatttcaccaaaatataagataactgattaaaaaactattagtatatagtacatttcaccaaaatatataaaacaatctactacttta  9350700     --------->YAB1     <--------HAHB4     --------->ATHB51     <--------ATHB1     -------->HAHB4     <---------ICU4    <---------YAB1    --------->AHL20(2)    <---------ATHB51    --------->ICU4  --------->YAB1 -------->AHL20(2) -------->AHL20(1)          <---------ICU4 ------->YAB1    <---------HSFB2a(2)                  <---------WOX13(1)    --------->LBD16 ->TOE2(3)       --------->HSFB2a(2)                 <------------CBF     <---------LBD16       ----- ---DOF2   <---------At4g35610            --------->MYB52(1)    ------->GAMYB    <---------KAN4(2)<--   aaaataataattaagctctctcgaacttaaaaattgcatagcacaaaccgagactaattgattcaaccgagactaaaccggagaataagcctaaaccaga  9350800        <--------HAHB4        --------->ATHB12                                                           --------->ATHB12       <---------ATHB12                          *TSS     <---------ALFIN1        <---------YAB1 ----       --------->ICU4                          <---------GLK1(2)                  <---------ATHB12  - <---------LBD16                              --------->At4g35610                 <------ZmHOX2a(2)-- ---->ARR14(2)     --------->ARR14(2)         <---------At4g35610         <----------DOF2      <----- -------HSFB2a(1) <------ZmHOX2a(1)           <---------ZAT2            <---------At4g35610   -------   accctcggaatcatttagaaggatagtcttgttgtatcacagcgagacagcttctcttccccatcttctctcgctgcttcttcgatcattgaagcatcca  9350900        --------->TOE1(3)        --------->TOE2(3) ----->ANAC46        <<<<<<<GRF7  <----------DOF2                                                 --- -------->LBD16    ----------->HVH21                                                <---------ALFIN1 ------->HSFB2a(2) ------>ZmHOX2a(1)                     <---------GLK1(2)     --------->YAB1     --- ----ALFIN1      <---------At4g35610               --------->ZAT18            ---------->DOF2     --- -->MYB46(3)     ----------->RAV1(2)          ---------->DOF2        ------>ZmHOX2a(1)  <----------DOF2   cccagaaaaaccctaattctcctgacaaaatgagctctttctcagttaaaaagtccccaaattcttccttcctcttcccaaaaatcacacctttacttat  9351000                                                     --------->LBD16                                                    <---------ANAC55(2)                                                 --------->GLK1(2)                                                 --------->ARR14(2)                                                <---------GLK1(2)                                        <---------MYB55(2)                                        --------->MYB46(3)                <---------MYB52(1)                                      --------->ANAC58        <---------ANAC58                                      --------->ANAC46        <---------ANAC58                                 ------>ZmHOX2a(1) <---------LBD16       --------->LBD16 ------>ANAC58                ------>ZmHOX2a(1) --------->ARR14(2)      --------->ANAC46       <----- ------>ANAC46            --------->ARR14(2)    <---------ARR14(2)     <---------LBD16       -------- ------>ANAC58   <---------------AGL15--------->ANAC58     <---------MYB52(1)                --------   acgacatcgtctcactctcccattactagttcctcctcacaaaccaccaagattccgcatcgttgcttctctctccggtacttcatgggtctctcaagct  9351100                 <--------P                <-------GAMYB               --------->MYB55(2)                                             --------->TOE1(2)        <---------ARR14(2)                                                   <---------HSFB2a(1)  --------->ANAC58 <------MYB83                                     --------->DAG2  --------->ANAC58 <------MYB46(1)                            <---------------AGL15 ----GLK1(2)   <---------MYB46(3)                             --------------->AGL15 ->ANAC58      --------->MYB111(2)          ------>ZmHOX2a(1)----------------->AGL3 ->ANAC58     <---------AtMYB61       ------->TEIL------>ZmHOX2a(1)---------->DOF2          ---------   tctcaagacaaatatggtggttgggctcttgctgaagatgaaactccttctcctcattcgataactaaaaaaagttagtaccttcgaagaatgttagtgg  9351200                                                                                                 <---                                                                                                -----                                                                                              <------                                                                                              -------                                                                      <------ZmHOX2a(1) --------->ALFIN1                       <-----------RAV1(1)                            ===============================                   <----------DOF2      <---------YAB1           --------->ALFIN1       <-----------RAV1(1) >MYB52(2)   --------->YAB1      --------->ATHB12          <---------ZAT14        --------->ATHB12   gaaattgaagaaatttcataactttgtgttgcaattgatttgattatttgttttttgtgagtttagagtggaggaatgttgtaatcactggtgttggatc  9351300  Previous    Next  AGI:  At3g25680.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42077.1); contains InterPro domain S-layer homology region (InterPro:IPR001119) Range:  from: 9350849    to: 9353664    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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