Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <----------DOF2                                                                          --------------------->WRI1                                         ====================================HOX2a_HOX2a                                         =========================HOX2a_HOX2a                                      --------->DEAR3(1)      <---------MYB59                                 ---------->DOF2   ------>NtERF2          <---------DAG2                               =================HOX2a_HOX2a  --------->ANAC58                               ------>ZmHOX2a(1)   --------->LBD16     <---------ALFIN1 --->At4g35610                --------->TOE2(3)   <---------DEAR3(1)  ------>ZmHOX2a(1) ----At4g35610              <---------YAB1--------->YAB1     --------->ANAC58                -------- ---->RAV1(1)         --------->AHL20(1) <------ZmHOX2a(2) <------ZmHOX2a(1)            --------->WRKY38(1) >At4g35610       <-------TEIL--------->TOE1(3)  <---------LBD16  --------->ARR14(2)<-------TEIL   agtagaaggcataccttgagtacatatattatccttaacgccgatcaaaactccggcgagaggacccaattcctcacctttagcgattcgttgatcaatc  9343000                            <---------ANAC55(2)                            <---------ANAC58                            <---------ANAC58                            <---------ANAC46                            --------->ANAC55(2)                            <---------ANAC55(1)                           <-------TEIL                         <---------MYB52(1)                         <---------ARR14(2)                 --------->KAN4(2)                --------->HSFB2a(1)                                               --------->ARR11(3)                <---------KAN4(1)                                                 <---------GLK1(2)                <---------HSFC1(2)                                                <---------ARR11(3)                --------->HSFC1(2)                    <-------TEIL          ----------->GT1                <---------HSFB2a(1)               <---------TOE1(3)        --------->DAG2          <-                --------->KAN4(1)             --------->ZAT2             ---------->DOF2           --               <---------KAN4(2)              --------->At4g35610 <---------ARR14(2)               --        <----------DOF2  --------->ARR14(2)   <---------ZAT2   <---------ANAC46 ----------->ARR10  <-     --------->GLK1(2) --------->ANAC46       <---------At4g35610 --------->ARR14(2)          ------- ->WOX13(1)--------->HSFB2a(2)----------->HVH21   <---------TOE2(3)--------->CCA1(2)  <-----------GT1   tcttgagcatctttgagaacattctccgatacgtgaaggaagcatttgagctgaggttcagtgagacggatacgagaaaggtaagattttgcgatttcga  9343100                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                                <----            --------->DEAR3(1)                                                                 ------      <---------ARR14(2)                                                                       <-----      --------->ARR14(2)<---------DOF5.7(2)            --------->ALFIN1                     ---------    <---------MYB46(3) <---------ZAT14                 <---------ANAC46    --------->ETT(2) ---------   <---------AtMYB61   --------->ZAT18               <---------ANAC46   --------->ALFIN1    <-------- --------ZAT2 <------NtERF2       <---------MYB46(3)<-----------RAV1(1)<---------HSFC1(2)   <-------- ------->At4g35610  <---------ANAC46          <---------TOE2(3) <---------DOF5.7(2)         <-------- ------->ZAT2--------->LBD16      ----------->GT1   <---------AtMYB61  --------->HSFC1(2)   <-------- --------At4g35610 <------ZmHOX2a(1)     --------->GLK1(2)      --------->MYB52(1)          --------- -->ETT(2) <---------LBD16       --------->ALFIN1--------->GLK1(2) ------->GAMYB           --------->GLK1(2)   cagctgtggtttcgccggagaggagtgaacgacgagtggtgagaatttgagattgtggtggagagataacggaagtgtcgatggtcttcgaagaagctgc  9343200 ------->ARR14(2)             <------NtERF2 --------ARR14(2)         --------->LBD16                  <-------GAMYB ----->LBD16             --------->DEAR3(1)               <---------ATERF1(1) -----ANAC46            --------->ATERF1(1)               <---------DEAR3(2) --->At4g35610          --------->DEAR3(2)                <---------MYB46(3) ----LBD16            <---------ARR14(2)                  --------->MYB55(2) >HSFC1(2)            --------->ARR14(2)                 <---------DEAR3(1) >At4g35610    <---------CCA1(1)                         <---------ANAC46 -HSFB2a(1)    <---------RVE1(1)                       ------------>AtMYB77      <----------DOF2 -HSFC1(2)    --------->ARR11(3)                      <---------DEAR3(1)        <---------ANAC58 -At4g35610   <---------ARR11(3)       <------ZmHOX2a(1)<------NtERF2           <---------ANAC46 -ZAT2       <<<<<<<<<RAP2.2<---------ANAC46         <---------LBD16            <---------ANAC58 >ZAT2<---------MYB46(3)--------->MYB46(3)<---------ZAT6------>NtERF2<---------ETT(2) <---------HSFC1(2)   ggagacgatggttttagatatttggaaccggcgtagagggaggagtgatagagaacgcggcggttgcaatgtcgataacattgcttgaagtttcgaattt  9343300                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              -------                                                       <---------ZAT6                    ----------->HVH21                        --------->ARR11(3)             ----------->GT1   <------ZmHOX2a(1)    <------                      ----------->ARR10        <---------ANAC46   ---------->DOF2    --------->LBD16         --------->YAB1 <---------ARR11(3)    --------->MYB59 <----------ID1       <---------LBD16   gaatcactgaatcatcaaattgggaagatagtgagtttaaactgaaattgggtagtagagtaataagacaaagaaggatgaattctccggtgtaacgccg  9343400 ---NtERF2 ----->RAP2.3(1)                                                                                <---- ->NtERF2 <---------RAP2.3(1)                                                                   <---- -----ATERF1(1)                      --------->YAB1                                            ------ ---->LBD16 --------->DEAR3(1)      --------->ICU4                                           <------- ----ATERF1(2)          <------ZmHOX2a(1)                                                  --------->ZAT18 ----DEAR3(1)        --------->HSFB2a(2)   <------ZmHOX2a(1)                          <---------YAB1 --->DEAR3(1)        <---------HSFB2a(2) *TSS                                       --------->ATHB12 --->ATERF1(2)  <---------MYB46(3)  <---------ATHB12        <---------ZAT6         --------->AHL20(2) -->ATERF1(1)------>NtERF2        --------->GLK1(1)    <-----------GT1           --------->ARR11(3) ---LBD16<---------ANAC46   <------ZmHOX2a(1)      <----------DOF2               <---------ARR11(3)   gcgaaaatgtttcggcgactgttcgaggaaggagagaaatcatcaggataagacttttttcagtgttcaaaacatggagagaagatttattagtgggccg  9343500                                                                        <---------ANAC46                                                                        <---------REM1(1)                                                                 <------NtERF2                                                                 --------->ATERF1(1)                                                                ------>NtERF2                                                                <---------ATERF1(1)                                                                <---------DEAR4(2)                                                                <---------RAP2.3(1)                                                                <---------ORA47(2)                                                                <---------ERF1  <---------ZAT14      ----------->GT1                                ---------->DOF2   <-----------------------TaNAC69(2)  <---------AHL20(2)                      ---------->DOF2      <---------RAP2.6(2) --------->AHL20(2)                       <---------DOF5.7(2)  <---------RAP2.3(2) <---------AHL20(2)                     --------->DOF5.7(2)    <---------DEAR3(1) --NtERF2    ---------->DOF2   <-----------GT1      --------->YAB1<---------DEAR3(1) -----RAP2.6(3)             --------->AHL20(2)     <---------ATHB12  <---------AtMYB61 --->RAP2.6(2)    ------------>CBF     --------->TOE1(3)       <---------RAP2.3(3) --PCF2----------->GT1 ------------>CBF--------->TOE2(3)   ---------->DOF2 <---------ZAT14   <-------   aaattaaatgggtaataaagcccaatacaattttttcttatcgttaaagcccaataaaagttaaggcggcgatggtgtagactgtagaacgagttatgaa  9343600                                                                   --------->AHL20(2)                                                                   --------->YAB1                                                                   <---------AHL20(2)                                                                  <---------YAB1                                                                <--------HAHB4                                                                <---------ICU4                                                                --------->YAB1                                                               --------->ICU4                                                               <---------YAB1          --------->TOE2(3)                                                             --------->YAB1            --------->TOE1(3)                                                             --------->TOE2(3)       <---------TOE1(3)                                                          --------->MYB52(1)         <---------TOE2(3)                                                       --------->ANAC46  <---------AHL20(2)                                                       --------->ANAC55(2)      <---------YAB1                                                       <---------ANAC55(2)     <---------TOE2(3)                       <---------YAB1                 <---------TOE1(3) --------->AHL20(1)          <---------YAB1         ------->TEIL         <---------TOE2(3) <---------AHL20(1) <-----------GT1       ----------->GT1 --------------->AGL15----------->GT1  <---------AHL20(2)   --- --YAB1<---------SPL7--------->YAB1--------->KAN4(2) <-----------GT1   <---------AHL20(2)       -----   tagttacgacttacgattatctattatgttatatgtatgttcccaaaattgtatttaacgtaacgataattatatatattttatgttaagcttaaaacag  9343700                            <<<<<<<<<<<<<<<<<LFY                        <----------DOF2                         <------MYB83                                  <---------ICU4                         --------->ANAC55(2)                         --------->ARR11(3)                         <---------ANAC55(2)                         <---------ARR11(3)                         <------MYB46(1)                        --------->At5g28300                         ----------->GT1                       ----------->GT1              <----------DOF2                                --------->LBD16           --------->ARR11(3)                                <---------At4g35610           <---------ARR11(3)     ----------->GT1        --------->ARR14(2)     --------->YAB1     --------->MYB46(2)              <---------GLK1(1) <-----------GT1 -------->HVH21         --------->MYB59 --------->AHL20(2)   --------->At4g35610 ---->At4g35610         <---------TOE2(3)    <-------TEIL<---------ARR14(2)       <----------DOF2   ttgacaatgagaaggtctttagaaattaggtaacattggtaaaaatatacattcaagtatttccgctgtaaaatctttaccatgcttttgagttttaatc  9343800                                   ----------->GT1                               --------->ICU4                          --------->ANAC55(2)                          <---------ANAC55(2)                          ----------->GT1                          <---------ANAC46                               <---------ANAC58                       ----------->TGA1                                  <---------ANAC58                       ----------->HVH21                          --------->MYB52(2)                      --------->SPL7                          ----------->GT1        <---------ATHB12  <---------bZIP60(1)             --------->ATHB12<----------DOF2      --------->WOX13(1)<---------TGA2(2)         ------->TEIL<---------MYB46(3)                   --   gaactagccaatcaatgttattcgtatgacgtaaaaattgaaaaatatgacgaacttatgtcattggttatttgtgctttcccttgttgacatgtattag  9343900  Previous    Next  AGI:  At3g25660.1    Description:  glutamyl-tRNA(Gln) amidotransferase, putative. similar to ATFAAH (ARABIDOPSIS THALIANA FATTY ACID AMIDE HYDROLASE), N-(long-chain-acyl)ethanolamine deacylase/ amidase [Arabidopsis thaliana] (TAIR:AT5G64440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69945.1); similar to hypothetical protein OsJ_015658 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32175.1); similar to H0306F03.6 [Oryza sativa (indica cultivar-group)] (GB:CAH68239.1); contains InterPro domain Amidase signature enzyme; (InterPro:IPR000120); contains InterPro domain Glutamyl-tRNA(Gln) amidotransferase A subunit; (InterPro:IPR004412) Range:  from: 9340660    to: 9343441    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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