Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <-----------GT1                                             <---------YAB1                                           --------->YAB1                                           <---------ICU4                                           -------->ATHB1                             <-----------GT1                                           --------->ATHB51                       <---------ICU4                                           <--------HAHB4                        --------->ICU4                                           -------->HAHB4                        <---------YAB1                                          <---------ATHB51                     <---------ICU4                                          <---------YAB1                       --------->YAB1                                          --------->ICU4                      <---------YAB1 ------>ANAC46                         --------->AHL20(2)                     --------->ICU4 ----GT1                               <---------AHL20(2)                     <---------ATHB12 >AHL20(2)       <----------DOF2    ----------->GT1                         --------->YAB1   acacagttcaaaataatctctttgtaaacatggaaacttagttaattattacaacacaatagactataacttcaactgtaatcataattttctattccaa  9302800                                                                                                  <--                                                    ------>MYB46(1)                  ------->GAMYB<--                                                    ------>MYB83                   -------->P <------                                                  <---------MYB59                --------->MYB46(3)                                                 ----------------->AGL1  ----------->GT1      <------                                        ------>ZmHOX2a(1)                <----------ID1      <-------TEIL                           --------->AHL20(2)<---------DAG2            ---------->DOF2   --------->DAG2                           <---------AHL20(2)<----------DOF2    ------------------------>ANAC81<-----   aacttatactataaacttgagtttgatatttaaaattttgtcctcggctttaccaaattcaaaaaaaaacacaaaaagaaaaaacaaccctaaggtgctt  9302900                                                                     --------->GLK1(2)     --------->KAN4(2)  <----------DOF2                              <-----------ARR10    --------->YAB1      <---------DAG2                               --------->ARR14(2)       <------   --------------->AtSPL8                                           <---------GLK1(2)         <------ -------ANAC58       <-----------GT1                    --------->AHL20(2)                 <---------ICU4 -------ANAC58   <----------DOF2                        <---------AHL20(2)               <---------MYB59 ---ANAC58     ---------->ID1                          --------->AHL20(2)     --------->GLK1(2) ---ANAC58 <----------DOF2               <----------DOF2--------->AHL20(1)--------->ANAC46------>ZmHOX2a(1) -----DOF2 <---------DAG2    <----------DOF2     <-----------GT1---------->DOF2       <-----------GT1   tcttgatcataccctttttctttttacttttctttccctaattctttttttttacaaattaattactaaagaatctccacaatctgattttcctaattac  9303000          --------->ANAC46                                                                       ----          --------->ANAC58                                                                      <----        <---------ALFIN1                        <---------GLK1(2)                               -----  <---------ICU4                       --------->YAB1      --------->YAB1                      <----- -----GT1 --------->ANAC58  <---------GLK1(2) <---------YAB1                                 <------- ---AHL20(2)     <-----------GT1      <<<<<<<<<ARR2     ------>ZmHOX2a(1)   <-----------GT1  <-------   ttcataatccccacgctaattacctctctcgattctcacaatcaaatgctgattcttcctatcaaattccatatttttaaactttgcccaaatttgagga  9303100                     <---------ICU4                     --------->ATHB12                     --------->ATHB51            <---------AHL20(2)         <---------ICU4                          --------->AHL20(2)         --------->YAB1<---------WOX13(1)     --------->YAB1        <---------ATHB12         --------->AHL20(2)  <---------bZIP60(1)<--------ATHB1          <---------ATHB51  --------->bZIP60(1)--------->YAB1        --------->YAB1 ----->CCA1(2)       -------->ATHB1     --------->YAB1 -----ARR14(2)      <---------ATHB12 --------->YAB1 ---->ARR14(2)      --------->ICU4   <---------ICU4               <---------TOE2(3) -ZmHOX2a(1)        <---------ATHB51<---------AHL20(2)      <---------YAB1      <------------CBF   <- --TOE1(3)  <---------ICU4       <---------AHL20(2)      <---------MYB52(1) --------->YAB1      ----- --TOE2(3)  --------->YAB1      --------->AHL20(2)     ----------->GT1 --------->AHL20(2)     <------   tatgatgtcaataatcatgtcaataattgacataataaataataacaataataaaatcagttatttttaagaatgaaataaaaattgaaacaaaatttgt  9303200                                                 --------->ANAC58                                                 --------->ANAC58                                               *TSS                                               XXXXXXXXXXXXXXXXXXXXX>MIR864-3P                                             --------->ANAC58         --------->DAG2                      --------->ANAC58                                  <-----        ---------->DOF2   ---------->DOF2  ---------->DOF2                                 --------->ZAT14 --------PCF2         <----------ID1  --------->DAG2           <---------TOE2(3)           <---------ZAT18 ---->ALFIN1--------->ALFIN1      <---------ANAC55(2)          <---------TOE1(3)           <---------ZAT14 -----RAV1(1)       ---------->DOF2  ---------->DOF2  <---------ALFIN1                   --------->ANAC46   ggggcaaatgaaaagtggaacaaaaagaaaaagaaaacgtaaagctaaagcaaacaacactcttgaaggttgaagtctatagctaagcttcactacactt  9303300                                                                                           <---------At4g35610                                                                                           --------->At4g35610                                                                                       <-----------HVH21                                                                                      --------->YAB1                                                                                      ------>ZmHOX2a(2)                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                 ------>ZmHOX2a(2)                                                                                --------->CCA1(2)                                                                                --------->ARR14(1)                           --------->YAB1                                       <------ZmHOX2a(2)                        --------->WOX13(1)                                     --------->ARR11(3)             <---------ARR11(3)               ---------->DOF2                  --------->ARR14(2)             --------->ARR11(3)--------->ARR14(2)           ---------->DOF2    --------->AGP1             --------->ARR14(2)--------->GLK1(2)     --------->DAG2            <---------ARR11(3)   <---------DAG2------>ZmHOX2a(1) --------->LBD16  ---------->DOF2            <---------ARR14(2) -----DOF2   <---------ARR14(2)<---------ARR14(2) --------->ARR11(3)--------->TOE2(3)<------ZmHOX2a(2)   tctcactctttcaaaaatcctctcatctatcaaaatccgagcaaaaaaaaaagataaagtttgaaagaaaccctagtttaagatccgatcgtcatctcca  9303400        ------>ZmHOX2a(2)      --------->ARR14(2)      <---------AGP1                                                      <---------ANAC58      <---------ARR11(3)                                                  <---------ANAC58      <---------ARR14(2)                                     <----------DOF2                        -      --------->ARR11(3)                                     <---------DAG2<-------GAMYB            -     <---------CCA1(2)                             <<<<<<<<<SARD1     <----------DOF2  <---------ANAC58  <---------LBD16                                  <<<<<<<<<CBP60g <-----------GT1     <---------ANAC58   attctctggatcttcaaaaaacccaaacaaacaaaactatacatacaatcccaaatttcgaaacttttttttctttgcgttgctctgtttcttgattttg  9303500                                                                                                <----                                                                                                -----                                                                                             <------NtERF2                                                                    --------->ZAT14         ---------                                                          <---------MYB52(1)               --------->LBD16                                                        ----------->GT1             <-----------GT1           ---------->DOF2                          --------->HSFC1(2)<---------ZAT14      --------->ETT(1)       ---------->DOF2                              <---------HSFC1(2)--------->ZAT14     <---------LBD16     <---------ATHB12                            ------>NtERF2    --------------->AtSPL3 --------->MYB52(1) -------->ANAC58  ---------->DOF2               --------->DEAR3(1)--------->ZAT6 <---------GLK1(1) -------->ANAC58 <------ZmHOX2a(1)         --------->MYB52(1)   <-----------GT1  --------->GLK1(1)  <   ttaagcaatgaaagaaagaggaaagagaacagcaatggaacgaagaaacgacgacgtttcgttatattacagtactccgtcggaattcacttgccggaaa  9303600                                                                                       --------->DEAR3(1)                                                                                   <---------ZAT2                                                                                   <---------At4g35610                     <------MYB83            ----------->RAV1(1)                   --------->ZAT2                     <------MYB46(1)         ------->GAMYB                      --------->DEAR3(1)                    <---------AtMYB61       --------->ANAC46                    <---------ANAC46                  <-------GAMYB <---------SPL1(2)                              ------>NtERF2                 <---------DEAR3(1)         --------->MYB46(3)                 <------NtERF2                 <---------ANAC46 --------->SPL7                              <---------RAP2.3(1) -----HSFC1(2) --------->LBD16  <---------ZAT14                              <---------DEAR3(1) ---->HSFC1(2) ------>NtERF2    <---------SPL7    <---------GLK1(2)          <---------RAP2.6(2) >LBD16      <---------LBD16  --------------->AtSPL8             <---------TOE1(2) --------->At4g35610 -------TEIL------>ZmHOX2a(1) --------------->AtSPL3     --------->WOX13(1) <---------LBD16   catccatctgtttcctccggcgttggtatttgtccgtactgtctcaacgacagattagtcaatctcgtatgctccgaatgcggcgagcagcgactctctt  9303700  Previous    Next  AGI:  At3g25590.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO42037.1) Range:  from: 9303247    to: 9304852    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version