Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------YAB1                                                                                --------->ICU4                                           <-----------GT1             <--------P--------->YAB1              --------->STY1(2)           <---------AHL20(2)   <-----------GT1--------->YAB1    <---------TOE2(3)           <---------TOE2(3)        <---------TOE2(3)   --------->ICU4 ---DOF2      <---------STY1(2) ---------->ID1      <----------DOF2   <---------MYB52(1)  <---------ZAT6   ggttttgatgttttctagctagtttgatcagtttgtggttttttttaatcgtttcttttaagttttaacatcggtagctataatgatgtttagagtcaaa  9293300       --------->YAB1                 ------>MYB46(1)                    --------->ZAT6       <---------ICU4                 ------>MYB83           --------->LBD16      <---------YAB1          --------->TOE2(3)             <---------HSFB2a(2)      --------->ICU4     <----------DOF2          <---------AHL20(2)   -------->P                  <-    --------->YAB1 <----------DOF2  --------->TOE2(3)       --------->HSFC1(1)                 ------   <---------YAB1  <---------DAG2   <---------MYB59         --------->HSFB2a(2)       ---------->DOF2   acttgataataataactaatactttttctttatctcaacctaattcttatatttagtttcttccagaattatctaccactagaatactgaaagttttgtt  9293400                                                                                 ------>ZmHOX2a(1)                                                                                 --------->At4g35610                                                                                 ----------->RAV1(2)                                                                               ===============HOX2a_HOX2a                                                                               ------>ZmHOX2a(2)                                                                              ================HOX2a_HOX2a                                                                             --------->ARR14(3)                                                                             <---------ARR11(3)                                                                             --------->ARR14(2)                                                                             <---------ARR14(3)                                                                             --------->ARR11(3)                                                                             <---------GLK1(2)                                                                             <---------ARR14(2)                                                                   <---------ANAC55(2)                                                                   --------->ANAC58               <--                                                                   --------->ANAC55(2)     <---------ANAC58                                                                   --------->ANAC58        <---------ANAC58                                                                   ----------->GT1        <---------HSFC1(2)                                                                  <-------TEIL<------ZmHOX2a(2)   <--                     <----------ID1                           <---------------AtSPL8   <------ZmHOX2a(1)      --------->GLK1(2)             --------->ALFIN1          <---------------AtSPL3 <---------TOE2(3)     <---------GLK1(2)       ---------->DOF2                 ---------->DOF2--------->RVE1(1)     <-- ---------DOF2    <---------------------WRI1          --------->YAB1       ----------->ARR10   ------ ---->ID1    --------->TOE2(3)      <-----------RAV1(1)---------->DOF2   ---------->DOF2  --------->HSFC1(2)   tcttttagattctaaacttaattgagacaaacaaagaagtgttggagattacacaataaaagtaaaagtacgtaaaaaagatcctctgaggaagcttgtt  9293500       <---------MYB52(1)     <---------ANAC58     <---------ANAC58 ----------------------->TaNAC69(2) --------->KAN4(2)        --------->At4g35610 -------ANAC58            <---------At4g35610       --------->ANAC58 -------ANAC58--------->ANAC58                      --------->ANAC58                              <-- -------ANAC46--------->ANAC58                 --------->ANAC46                        --------->TOE1(3) ---->ID1     --------->ANAC46               --------->ANAC46    <-----------GT1       --------->TOE2(3)   gcttattccgtcgtctacgcaacttggaagcagagcaataacatgctacacaactcgcatcacatataaaccggtttggattaaactgaccttaaccctt  9293600                                                   ----------->ARR10                                               --------->ZAT2                                               --------->At4g35610                                               <---------ZAT2                                            --------->LBD16                                           --------->ANAC55(2)    --------->ANAC58        --------->GLK1(2)                  <---------ANAC46       --------->ANAC58   ---------->DOF2              <----------DOF2<---------At4g35610--------->ANAC46         ---------- <---------YAB1            <----------DOF2 <---------ANAC58    ----------->HVH21     <---------ARR11(3) -------YAB1     --------->WOX13(1)        <---------ANAC58 <-----------HVH21        <---------GLK1(2)   cttataaaagactctgtatcaattagaggctttactttaagtcttccgtagctgagacactctgtctcacgcagagtcttttgaacagattttaaaagcg  9293700          <---------ARR11(3)         --------->REM1(1)     <------ZmHOX2a(2)     --------->CCA1(2)    >>>>>>>>>GATA-1    --------->ARR14(2)    <---------ARR14(2)    <---------ARR11(3)    >>>>>>>>>GATA-3             <---------ICU4       --------->ARR14(2)    >>>>>>>>>GATA-4             --------->YAB1      --------->GLK1(1)                            ----    --------->ARR11(3)         <---------YAB1       <---------GLK1(1)                            <---    >>>>>>>>>GATA-2            --------->ICU4 ------->TEIL                                       ----    --------->AGP1       <------NtERF2        <---------ARR14(2)                              <------   --------->GLK1(1)  *TSS <-----------TGA1   --------->GLK1(2)                               <------ >DOF2------>ZmHOX2a(2)<---------DEAR3(1)     --------->ARR14(2) --------->ANAC46     <<<<<<<<<<<<<<<   aagagagatctacatcttctcatcgtcgtcgtcatcatcaacaattcgaatctgaaatctgcaattcacgagaagaagtttttttttgtaacaatggcga  9293800         --------------->AtSPL3 ----->ARR14(2)                                 <-----------GT1 ------ARR14(2)   --------->AHL20(2)    <---------YAB1                                    <---------YAB1 ----->GLK1(2)    <---------AHL20(2)   <---------TOE2(3)                           <---------YAB1 ---ANAC58   <-------TEIL             --------->YAB1                      <---------AtMYB61  <------- ---ANAC58----------->GT1           <---------WOX13(1)        <---------AHL20(2)<---------YAB1 <<LFY   <---------------AtSPL8   --------->ATHB12       <---------AHL20(2)     --------->ICU4-------   atccaattcaagaggtacaattttttggaatttcatcgattgatgatttttttctgtatttgattttttttttgttttggtgatgatgaatgaagattat  9293900                                                                  ---------->DOF2                        --------->ANAC58                      <---------HSFB2a(2)                        --------->ANAC58                      --------->HSFB2a(2)                      ---------->DOF2        <----------ID1  <---------LBD16               ------->GAMYB             --------->CCA1(2) <---------ARR14(2) --YAB1 <---------ARR11(3)        <------ZmHOX2a(1)     <---------ANAC58          --------->ATHB12 -->ATHB12  --------->MYB52(1)  <---------ANAC46        <---------ANAC58         <---------YAB1   tgagaaacaagttctaacggtagcgaaagctatggaggataagatagacgacgagatagcgtctctggaaaagcttgatgaagatgatttggaagttttg  9294000                                           --------->MYB52(1)                                          --------->ARR14(2)                                --------->LBD16                               <---------ANAC46                 <---------At4g35610      <---------ARR14(2)           <---------ARR14(2)         ---                 --------->At4g35610   >>>>>>>>>TBF1                   --------->ARR14(2)         <--              <---------At4g35610<------NtERF2   <---------MYB46(3)--------->At5g28300           ----     <------ZmHOX2a(1)        <---------LBD16   --------->ALFIN1  ----------->GT1  <-------TEIL  <---   agagagaggagattgaagcagatgaagaaaatggcggagaagaagaaacggtggatgagtattggacatggtgaatactctgagattcattctgagaaag  9294100          <---------MYB46(3)        <-----------HVH21          ----------->GT1        <---------MYB52(1)                                             <----         <---------MYB52(1)    <---------ANAC46                                                 -----        <-------GAMYB         <------NtERF2                 --------------->AGL15 <---------HSFC1(2) ------>GLK1(1)              <-----------HVH21 <---------ANAC46                   <---------HSFB2a(1) -------GLK1(1)        <---------ZAT18         <---------ANAC58                 <---------ARR14(2) <- ----->ARR11(3)        <---------WRKY38(1)     <---------ANAC58                 <---------GLK1(2)<--- ------ARR11(3)        --------->ZAT14       <---------At5g28300 ---------->DOF2--------->ARR14(2)---   atttcttctccgttgttaaatctagtgaacgcgtcgtttgtcacttctaccgtgagaattggccctgtaaagtaagtttgtggattcttcgtccatgtga  9294200  Previous    Next  AGI:  At3g25577.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G25573.1) Range:  from: 9292923    to: 9293329    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g25580.1    Description:  thioredoxin-related. similar to TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG) [Arabidopsis thaliana] (TAIR:AT2G18990.1); similar to unknown [Populus trichocarpa] (GB:ABK93948.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 9293722    to: 9295584    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version