Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----                                                                                               ------                                                                                             --------        --------->ATHB12                                                                  ------->GAMYB        -------->ATHB1                                                                   --------->MYB46(3)        <---------ICU4                                                                   <---------MYB52(2)       <---------YAB1                                                                    <---------MYB55(2)      <----------DOF2 --------->YAB1                          ------->GAMYB              <---------MYB111(2) ------YAB1           <---------ICU4                 <xxxxxxxxxxxxxxxxsmallRNA(s)       ------>MYB83 ---YAB1--------->ATHB51                            <---------At4g35610                 ------>MYB46(1) ---AHL20(2)         <---------YAB1                 --------->At4g35610                ----------->RAV1(1) -->AHL20(2)    <-----------GT1  ---------->DOF2<---------ALFIN1                     --------->MYB46(3)   ttagtttgcattattgtattaccatcatcgctgaagaaaggcattactcaacacatctgtctaactgtcttagtaatggacaactaaaccaacaaaccaa  9275400                                                                                               ------                                       <---------ANAC58                  --------->ATHB12--------->HSFB2a(2)                                       <---------ANAC46              --------->ATHB12  --------->At4g35610                                       <---------ANAC58       ----------->RAV1(2)      <---------ZAT2                                  <-----------GT1           <---------ALFIN1           <---------At4g35610                              <---------AHL20(2)          <-----------HVH21     <---------ATERF1(1) ->MYB46(1)                   --------->AHL20(2) --------->ANAC58  <---------DAG2      --------->ZAT2 ->MYB83                    <---------YAB1       --------->ANAC58  <----------DOF2  <---------ANAC58 ----->RAV1(1)          <---------GLK1(2)   <---------ANAC46--------->REM1(1)  <---------DEAR3(1)  <- ->MYB46(3) <-----------RAV1(1)<---------YAB1  ---------->DOF2<---------At4g35610   <---------ANAC58   catataagtctgaaatgtggccttcagattatttttatactgcgtggcctaaagcaaatgcttcacctgctttattgatgggcagtgcctgctggaatca  9275500                                                              <---------AHL20(2)                                                              --------->AHL20(1)                                                 ---------->DOF2                                           ---------->DOF2    --------->AHL20(2)                                         --------->ANAC58    <---------AHL20(2)                                  ------>ZmHOX2a(2)          --------->AHL20(2)                                <---------ARR11(3)   --------->AHL20(2)                     <--------                    <---------AHL20(2)   --------->ANAC46 --------->AHL20(2)           ---------->DOF2                    --------->AHL20(2)   --------->ANAC58<---------AHL20(2)       --------->AHL20(2)- --->YAB1---------->DOF2        --------->ARR11(3) ----------->GT1              ----------->GT1<----- --------ARR11(3)--------->AHL20(2)   <---------REM1(2)  --------->AHL20(2)   ---------->DOF2  ------   acatatttttacaaagaaataaaaaattcaaattgatctcttcacgaaagagaaagaaaataaataatttgaaaatttgaaaaagaaaataaagctttta  9275600                                                                                                   --                                                                                            <--------                                                        --------->CCA1(2)                  -------->HAHB4                                                       <---------ARR14(2)                  <---------ICU4                                                       --------->ARR14(2)                  --------->ATHB12                                                       <---------ARR11(3)                  --------->ATHB51                                                       --------->ARR11(3)                  <--------ATHB1             --------->YAB1                            --------->ARR11(1)                 <---------ATHB51  ----------->GT1                                  ---------->DOF2                        --------->AHL20(2)  <----------ID1                             --------->AHL20(2)                           --------->ICU4 --DOF2 --------->AHL20(2)               <---------AHL20(2)                               <---------YAB1 --------->DOF2                         --------->AHL20(2)                                <---------AHL20(2) ----HSFB2a(2)                          <---------AHL20(2)         <---------YAB1     --------->AHL20(2) --->HSFB2a(2)            <---------AHL20(2)<---------AHL20(2) ----------->GT1 <----------DOF2     --   gaaaaagaaaaaaaatagtaatagtttttaaaatgctatgaattaaataatataaaagatatggatagtataatttcattactttcaagaaaataattga  9275700                                                                          <-------PIF5             --                                                                     --------->ANAC58              <-                                                                     --------->ANAC58              <-    ----------->GT1                         ----------->GT1    --------->ARR14(2)            -------- ------->ANAC58                  <---------HSFB2a(2)           <---------ARR14(2)      *TSS  <------- ----CBF   ------------------------>ANAC81<------ZmHOX2a(2)   <---------CCA1(2) <---------MYB52(2)--- ------->ANAC58                  --------->HSFB2a(2)  --------->TOE2(2)   ------->PIF5 <-------TEIL--   aacgcagagaaaaaaaaaaaaaaacaagagcccatcgagaatggatcagtaaaaaacctaaggcctatctccagcaagtgcaacttacatacattctcga  9275800                            --------->ATHB51                            <---------ICU4                            <---------AHL20(2)                            -------->HAHB4                            -------->ATHB1                  ------>ZmHOX2a(2)                            --------->ATHB12               --------->CCA1(2)         ------>ZmHOX2a(2) <---------ATHB51               <---------ARR11(3)       --------->ARR14(2)  --------->ICU4                 >>>>>>>>>GATA-1       <---------ARR14(2)  <---------YAB1                 --------->AGP1     <---------YAB1      <---------ICU4                   >>>>>>>>>GATA-3 ------->AHL20(1)        <--------HAHB4                   >>>>>>>>>GATA-2 --------AHL20(1)       --------->ICU4                    >>>>>>>>>GATA-4 --------AHL20(2)       <---------YAB1                    --------->ARR11(3)               <--------- ->HSFB2a(2) <---------ATHB12  --------->YAB1             --------->ARR14(2)            <-----------GT1 --HSFB2a(2) <------ZmHOX2a(2)<---------YAB1              <---------ARR14(2)         --------------->AtSPL8 ------>AHL20(2)      --------->YAB1                     --------->GLK1(1)     ---------->DOF2    <-- ------->AHL20(2) <---------ARR11(3)     --------->AHL20(2)<------ZmHOX2a(2)--------->TOE2(3)  <-----   ataaattctgatccgatcaagaactcataattattgtaacagataaaatcaaatttgagagatctactactaaatctaacttaaagcattgtactttctt  9275900                                         --------->ANAC58                                         --------->ANAC46                                         --------->O2                                         --------->ANAC58                                       <---------ALFIN1                                   --------->MYB46(3)                                  -------->P <---------GLK1(2)                                <---------WRKY38(1)                                <---------WRKY45                                <---------WRKY12                          <---------GLK1(2)                               <<<<<<<<<<WRKY6--------->GLK1(2)           --------->ARR11(3)                               <<<<<<<<<<WRKY11                           <---------ARR11(3) -DOF2                         --------->WRKY18(1)               ---------->DOF2                   -- -------CCA1(2)      <----------DOF2------->GAMYB         <---------YAB1----------->ARR10          <- -----DOF2 <----------DOF2    <-----------HVH21         --------->ANAC55(2)         --------->CCA1(2)   ttatctcattctcctttgctctgctttcttctggtcaacccccacgagattccttcttatgtgattgtaaagagaagatttttcagagatgggtctcttc  9276000               --------->ATHB12             <---------ATHB12                         <---------TOE1(3)           --------->WOX13(1)                         <---------TOE2(3)      <---------ZAT14         <---------ATHB12                         --------->CCA1(2)     --------->ZAT14  ----------->GT1                                --------->ARR11(3)     <---------ZAT14 ------->ARR14(2)            --------->GLK1(2)   <---------ARR11(3)  <----------DOF2 --------ARR14(2)           <---------GLK1(2)--------->YAB1  <-----------GT1 --------->ZAT14   gaatcggtgaaatcaatcgattgggaacaagaatcgttcccaacttatcaagatttagggtttttgcctctctttgcagtgttcttccctacaattcgat  9276100                                                                                                -----                                                                                              ------>MYB46(1)                                                                                              ------>MYB83                                                                                              -------                                                                                            ------->GAMYB                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           --------->DEAR3(2)                                                                                           <---------MYB52(2)                                                                                           --------->MYB46(3)                                                                                           <---------MYB55(2)                                                                                           <---------ATHB12                                                                                          ------>MYB83                                                                                          --------->ANAC58                                                                                          -------->P                                                                                          --------->ANAC58                                                                                         --------->MYB55(1)                                                                                        --------->MYB46(3)                                                                                        <---------MYB46(2)                                                                                        <---------MYB55(2)                                                                                        <---------MYB111(2)                                                                                        --------->AtMYB61            <-------TEIL                                                                --------->DEAR3(1)          --------->ARR14(2)         --------->ATHB12                                   <---------MYB111(1)          <---------GLK1(2)    --------->ANAC55(2)                          <---------YAB1------>MYB46(1)          <---------ARR14(2) <---------AHL20(2)        ---------->ID1    --------->ICU4--------->MYB46(3)    ----------->HVH21        <-----------GT1        XXXXXXXXXXXXXXXXXXXX>MIR870      <-----------GT1   ttctacttgacagattcgtcttcgaggtaatttacttattcatgggattttagatttgttgtttcttcaatcgcatttattgttgtttcaccaaccaacc  9276200                                                                           <---------CCA1(2)                                                                 --------->TOE2(3)                                                                <---------ICU4                     <---------GLK1(1)                          --------->ATHB12        <---------ICU4                                          <--------HAHB4       <---------AHL20(1)                                       -------->ATHB1       --------->AHL20(1)   <----------DOF2                     --------->YAB1 -->GAMYB            --------->GLK1(1)                         --------->ICU4 ->P--------->AHL20(2)   <-----------GT1                       <---------ATHB12 -MYB111(1)     <---------LBD16                               ------>MYB46(1)               <-------- >MYB46(3)    <----------DOF2         <---------YAB1         --------->WOX13(1)      <---------YAB1 >AtMYB61  <-----------GT1  <---------DAG2   ----------->HVH21------>MYB83 ---------->ID1   ---------   caaaaaaaaaatattactttcggatttctactttttagttatgagttatgacccttgagagaccaatcattagtcttgtctctctgtatgattctgctga  9276300  Previous    Next  AGI:  At3g25540.1    Description:  LAG1 (Longevity assurance gene 1). Identical to LAG1 longevity assurance homolog 1 (LAG1) [Arabidopsis Thaliana] (GB:Q9LDF2); similar to LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) [Arabidopsis thaliana] (TAIR:AT1G13580.2); similar to Lag1 longevity assurance-like 3 [Brassica rapa] (GB:ABV89617.1); contains InterPro domain TRAM, LAG1 and CLN8 homology; (InterPro:IPR006634); contains InterPro domain Longevity assurance proteins LAG1/LAC1; (InterPro:IPR016439); contains InterPro domain Longevity-assurance protein (LAG1); (InterPro:IPR005547) Range:  from: 9275787    to: 9277922    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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