Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ZAT2                                                      --------->At4g35610     --------->ANAC58                                 <---------ZAT2     --------->ANAC58                       --------->ATHB12 -------->At4g35610                      <---------ANAC58 --------->RAV1(1)                       <---------ANAC58 ----->At4g35610                    <---------AtLEC2  <---------At4g35610 --->DOF2                      <---------ARR14(2)     ----------->RAV1(2)                 --------->ANAC58 ->DOF2  <------ZmHOX2a(2)     --------->ARR14(2)   <-----------RAV1(2)      ------->TEIL --------->ANAC58   gcagcacaaggatcagagagcatagcaatagtgtatttgcatttcttgattacttcagctggactctcacatactgatgcaccatgctccacaagctcat  9274500                                                                     ------>ZmHOX2a(2)                                                                    --------->CCA1(2)                                                                    <------ZmHOX2a(2)                                                                   --------->AGP1                                                                   <---------AGP1                                                                   <-----------ARR10                                                --------->DAG2     <---------ARR14(2)                                    --------->AHL20(1)             --------->ARR14(2)                                    --------->AHL20(2)             --------->ARR11(3)               -           <---------ICU4           <---------AHL20(2)             <---------ARR11(3)            ----           --------->YAB1           <---------AHL20(1)     <---------DAG2                        ----          <---------ATHB12         --------->AHL20(2)      <----------DOF2--------->MYB46(3)     ----   <-----------HVH21       <---------ICU4      ---------->DOF2    <---------CCA1(2)      --------->YAB1   cacactgtcacaatcatcaaaaattcccaaaattgcattaaattactcaaaaagtttccgactttatcagatctgaacaactaaaactaaatcagaaaac  9274600                                                     --------->ZAT14                                        <-----------GT1                                     <---------ICU4  --------->ZAT18 -------->YAB1   ---------->DOF2    --------->AHL20(1)                                              - ----->YAB1     --------->YAB1      --------->AHL20(2)                                             <- ----->TOE2(3) <<<<<<<<<ARR2        <---------AHL20(2)                                           ---- ----->TOE1(3) <---------ATHB12    --------->AHL20(2)<---------ZAT14     <----------DOF2        <----   cataataccaaaacacaatcaaagacaaaaaaaaaaaaaaaattaccttggagagtgttctgttccatacagtgactttgaatccattcttcaatagatt  9274700                  <---------ICU4                 <---------YAB1         <---------DAG2         <----------DOF2        <---------ANAC58   <---------bZIP60(2) ----------------->AGL1                             <---------ANAC58 ---------->HVH21<---------ATHB12                          --------->At4g35610               -------- --------WOX13(1)--------->ICU4   --------->GLK1(1) <<<<<<<<<GATA-1       <---------ANAC58   <------- ----->ATHB12   <---------TOE1(2)--------->ARR14(2)<-----------GT1<---------YAB1           --------->YAB1 ---TEIL<---------ANAC58       --------->LBD16   <---------AHL20(2)--------->YAB1         <---------ZAT6   cattgacatggcttttcccatgattcccaaacccagaaaccctacttccattttatctatcttctgcgattatagtgcttacttactgcttagtgatgat  9274800                    ------>NtERF2                   --------->ARR14(2)                  <------NtERF2                  --------->ATERF1(1)                 <---------ATERF1(1)                                                  <-----------GT1                 --------->LBD16             <---------YAB1                          <---------ZAT14               <---------LBD16  --------->YAB1--------->YAB1                    <---------At5g28300            --------->DAG2  <---------------AGL15   *TSS           ---------->DOF2   --------->ZAT14           ---------->DOF2  ==================================================MADS_MADS ->ICU4 --------->YAB1 <----------DOF2     --------->YAB1     --------------->AGL15  <---------ZAT18 --YAB1<---------YAB1 <---------DAG2      --------->ICU4      <----------DOF2  <-----------GT1   ggtctgagaatgataaagccggagccttttctaatcagagaaccattatcatcaaatacacttactttgaaaaggaagtatttacagtttactccctaca  9274900                                                     ------->PIF5                                                     <-------PIF5                                                     ------->MYC3                                                     ------->MYC2                                                     <-------MYC4                                                     <-------MYC2                                                     <-------MYC3                                                    <---------TGA1a                                                    <---------O2                                                    --------->O2                                                    <--------ABF1                                                    <---------ANAC55(2)                                                    --------->TGA1a                                                    <---------ANAC46                                                    --------->ANAC55(2)                                                   ------>NtERF2                                                  <------------OsbHLH66                                            --------->GLK1(1)                      ------->GAMYB         <---------GLK1(1)                                     <--                      ========================================MYC_MYB                             <--                     =========================================MYC_MYB                       ---------                     --------->MYB46(3)    --------->ARR14(2)                               ---------                     <------------AtMYB77  <---------ARR14(2)                               <--------                    >>>>>>>>>MYB1         <------ZmHOX2a(1)                          <---------WOX13(1)             ------->TEIL            --------->MYB52(1)                             >>>>>>>>>ARR2 ---            <---------AtLEC2   <---------YAB1     <---------ALFIN1                 --------->ATHB12<-      <---------YAB1>>>>>>>>>MYB2  --------->MYB46(3)------->MYC4                 <---------YAB1  ---   gtttgattctgtttgcatctctaactgccagttatgaacgaacaggatttcgccacgtgtttgaaataagagggattttgggttttgattgtttctcgaa  9275000        <---------TOE1(1)        <---------TOE2(1)       --------->SPL7     <---------SPL7   <---------------AtSPL8 -------ARR11(3) -------AHL20(1)                                                                                    - >HSFB2a(2)                <-----------GT1        --------->GLK1(2)                            ------ >HSFC1(1)         --------->YAB1           --------->AHL20(2)                                 <----- -HSFB2a(2)    --------->ARR11(3)        ----------->GT1                                       ------ ------>AHL20(1)<---------GLK1(1)       --------->DAG2                    <-------TEIL <---------ATHB12 --------YAB1  <---------ARR11(3)      ---------->DOF2       --------->ARR11(3)      --------->YAB1<- ------>ARR11(3)--------->GLK1(1)  <-------TEIL <---------AHL20(2)  <---------At4g35610--------->ICU4   tatttttggtacgatgagatatcatatttctactatatacataaagttaaataatctaatatagttcttcagcatattcatgttctctaatgactaatta  9275100                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                                   <---------RVE1(1)                                                                                  <---------ARR11(3)                                                                                  <---------GLK1(2)      --------->YAB1                                                              --------->ARR11(3)   <---------ICU4                                                               ----------->ARR10  <---------YAB1                <------ZmHOX2a(1)                               <---------TOE2(2) -------->YAB1            <---------ICU4                                    <---------TOE1(3)   <---- --->AHL20(2)             --------->YAB1                                    <---------TOE2(3)-------- ----AHL20(2)            <---------ATHB12          <-----------GT1         <---------DOF5.7(2)  ----- --->YAB1                --------->ICU4      <---------AHL20(2)          --------->DOF5.7(2)<-------- --------YAB1    <---------------AtSPL8      --------->AHL20(2)        <---------ZAT6<---------AHL20(2)   tatcataatcgtaaacttacaagtacaatgatgaggacggtctcaaattatatatacttcttgttcaattttagtgttaacgtagattttttttttaata  9275200                                                                                                 <---                                                                                              -------             --------->HSFB2a(2)                                                           --------->AHL20(1)     --------->At5g28300                                                                   <---------AHL20(1)    ----------->GT1             --------->YAB1                          <---------ICU4     <---------AHL20(2)    ------->GAMYB--------->CCA1(2)                               <---------------AtSPL8    --------->AHL20(2) --------->MYB52(1)            --------->ICU4      --------->YAB1--------------->AtSPL8  <---------YAB1 -----AHL20(2)  --------->ARR11(3)     <----------ID1     ----------->GT1 <---------YAB1--------->AHL20(2) ->YAB1  --------->GLK1(1)   --------->YAB1        ------>ZmHOX2a(2)   --------------->AGL15  <------ ---->AHL20(2)  <---------ARR11(3) --------->YAB1<---------ARR11(3)    <---------------AGL15  <------ -AHL20(2)   <---------HSFB2a(2)<---------ICU4   --------->ARR11(3)    --------->ICU4 ------->TEIL   aaacaacggtgatttctagatatacagagaagaataatgagaagacaaattgatcttaatttgtaatatagtacttattagagacatgaatattatatta  9275300                                                                                                -----                                                                                                -----                                                                                               ------                                                                                             --------        -------->ATHB1                                                                    ------->GAMYB        --------->ATHB51                                                                 <---------MYB52(2)        <---------ICU4                                                                   <---------MYB111(2)       <---------YAB1                                                                    <---------MYB55(2)      <----------DOF2 <---------ICU4                          ------->GAMYB              --------->MYB46(3) ------YAB1           --------->YAB1                 <xxxxxxxxxxxxxxxxsmallRNA(s)       ------>MYB46(1) -->AHL20(2)         <---------YAB1                 --------->At4g35610                 ------>MYB83 ---YAB1--------->ATHB12                            <---------At4g35610                ----------->RAV1(1) ---AHL20(2)    <-----------GT1  ---------->DOF2<---------ALFIN1                     --------->MYB46(3)   ttagtttgcattattgtattaccatcatcgctgaagaaaggcattactcaacacatctgtctaactgtcttagtaatggacaactaaaccaacaaaccaa  9275400  Previous    Next  AGI:  At3g25530.1    Description:  ATGHBDH/GHBDH; 3-hydroxybutyrate dehydrogenase/ phosphogluconate dehydrogenase (decarboxylating). similar to phosphogluconate dehydrogenase (decarboxylating) [Arabidopsis thaliana] (TAIR:AT1G17650.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78910.1); contains InterPro domain 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815); contains InterPro domain 3-hydroxyisobutyrate dehydrogenase-related, conserved site; (InterPro:IPR002204); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogenase, multihelical; (InterPro:IPR013328); contains InterPro domain 6-phosphogluconate dehydrog Range:  from: 9273037    to: 9274852    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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