Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------ANAC58                                                                    <---------ANAC58                                                                    --------->O2                                                           <---------ARR14(2)                                                        <------NtERF2                                                    <---------ANAC58=================================                                                    <---------ANAC46<---------TGA1a                                                    <---------ANAC58--------->TGA1a                  --------->LBD16                   <------MYB83    <---------O2                 <---------DEAR3(1)                 <------MYB46(1) --------->bZIP60(1)                 <---------ANAC46                  --------->MYB111(1)            --------->MYB52(1)                     --------->MYB52(2)                               -           <---------ARR14(2)                      --------->MYB55(2)                              --           --------->ARR14(2)                      --------->MYB46(2)<-----------HVH21            <--    --------->At4g35610                            <---------AtMYB61<---------bZIP60(1)     ---------    <---------LBD16<------NtERF2                   --------->MYB111(2)                     --------->ARR11(3)    <---------At4g35610                            --------->MYB59  <---------ANAC46 --------->CCA1(2) ------->DOF2   <---------LBD16                   <---------MYB55(1)<---------ANAC55(1)    <---------ARR11(3) ---ID1   <------ZmHOX2a(1)         <------ZmHOX2a(1) --------->ALFIN1--------->ALFIN1   ----------->ARR10   taaagcagcggaggaaacggcggagatagcgacgataaggagttttttggagttaggtggggatttagtggcgtgagggacgattagagatgagatattc  9255800                                       <---------At4g35610                                       --------->At4g35610                                   <---------ANAC46                                   --------->ALFIN1                                 <---------MYB46(3)                                <---------DEAR3(1)   ---------->DOF2              --------->ALFIN1 <------NtERF2                <---------MYB46(3)                                                  <-- =============bZIP_DOF       <---------DEAR3(1)                                                  ---- -------->LBD16              --------->ALFIN1       --------->DAG2               --------->At4g35610 ------->LBD16               <---------AtMYB61----------->GT1       --------->ANAC58             <--- -------LBD16             --------->DAG2 <---------REM1(1)  ---------->DOF2      <---------At4g35610 >CCA1(2)      <------ZmHOX2a(1)<---------AtMYB61  ---------->DOF2  --------->ANAC58          <------ZmHOX2a(1)   gccggaaaagaagcgaaggaggctggagaaggtggtggtggagatgaagggtataaagggaagaaaggagaagcatttgggtctgatgaagatggaggag  9255900                                                     ----------->GT1                                                     <---------MYB46(3)                                                    <---------AtMYB61                                                    --------->ALFIN1                              <--                                                    <---------ANAC46                         <-------                                           ----------->HVH21                                 <-------                                <---------MYB46(3)<---------MYB46(3)                      --------->MYB52(1)                               <---------ANAC46   --------->MYB55(2)                     ----------->HVH21                               <---------AtMYB61 --------->ALFIN1                     <---------ZAT14                               --------->ALFIN1  <---------DEAR3(1)                   --------->ZAT14                             <---------MYB46(3)  <---------AtMYB61                    --------->ZAT18                            <---------AtMYB61 <---------DREB2C(2)                  <---------ANAC46                            --------->ALFIN1  <---------DEAR3(1)              <---------ANAC46   <---                         <---------AtMYB61 ----------->TGA1                   <---------ANAC58 <-----           ----------->GT1  <---------DEAR3(1)<---------ANAC46                <---------ANAC58<------ -------MYB46(3)     <------ZmHOX2a(1)  --------->ALFIN1  --------->GLK1(2)   --------->MYB52(2)<---- ----->ALFIN1<--------P  --------->ALFIN1<---------MYB46(3)                  <-------TEIL--------->ANAC46 ------AtMYB61     <---------TOE2(3) <---------AtMYB61    ------->TEIL    <---------MYB46(3) <-------   tggttgaagagaatggtagtttaggaagtggtggtggtgatggtggtgacggtggtggtgaatctatagggaagaatggttcgtggagtacacgacggtc  9256000         --------->ARR14(2)                                                                       ---         <---------AGP1                                                                          ----   --------->ZAT6                                                                                <--- ----NtERF2                                                                                     <---- --MYB46(3)                                                                                     ----- --DEAR3(2)                                                                                     ----- ------ORA47(2)                                                                                 ----- ----ORA47(1)           --------->CCA1(2)                                                       <---- -----HVH21------>ZmHOX2a(2)                  --------->YAB1                                    ----- -----DEAR3(1)  <------ZmHOX2a(1)          --------->YAB1                  <----------DOF2      <---- --SPL7  <---------ARR14(2)             >>>>>>>>>TBF1         <---------ZAT6    <<<<<<<<<TBF1   <----   ggcgaagactagatcggaggatgaagataagagtaagtagaagaagaataagaagaagagcattgtgttatcttcttctttcttcttcaagagttcaaga  9256100                                                        <---------At4g35610    ---------->DOF2                                     --------->At4g35610 --->ZmHOX2a(2)                                         <---------ZAT2 ----->CCA1(2)                                         <-----------RAV1(1) ---ZmHOX2a(2)                                     <---------GLK1(2) -----ARR14(2)                                   ----------->ARR10 ---->ARR11(3)                                   <---------TOE2(3) ---->AGP1                                   --------->At4g35610 ---->ARR14(3)                               <---------ZAT2 -----ARR14(3)                               --------->ZAT2      <---------MYB46(3) ---->ARR14(2)                               <---------At4g35610<---------AtMYB61 -----AGP1           <---------DAG2     ------->TEIL--------->GLK1(2)                      ---------- -----ARR11(3)       <----------DOF2 <---------YAB1--------->ARR11(3) --------->YAB1     <---------MYB46(3)   tctgagaaaagagaagagagaaactttttgaatagagtgatgaatccagctaagattctgctggtgatggtttgataattttgtttttggtttgttctct  9256200                                                                                                 <---                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC46                                                                                           <---------ANAC55(2)                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                  <---------AHL20(1)                                                                                  <---------AHL20(2)                                                    ----------->HVH21            <---------AHL20(2)                                          ----------------->AGL1           --------->TOE2(3)    -----                                          ----------------->AG       <--------P  --------->AHL20(2)<-                                        --------->ANAC58           ----------->GT1--------->AHL20(2)                                        --------->ANAC58           <---------MYB46(3)     <---------TOE2(3)                  <---------ZAT14      *TSS         --------->ALFIN1 <---------WOX13(1)  <-----------GT1        <---------AtMYB61             ---------->DOF2             <---------AtMYB61  <---------YAB1<- >ID1----------->HVH21        <---------ZAT14---------->DOF2      --------->ALFIN1--------->AHL20(1)   taactcagtgatggtgagagagtagtagagagagtagagagaaagccaaaagaggtgatggaagaagagtggttgattcttaattttatttttacgtagt  9256300                                               <---------ANAC46              --------->ZAT14                                               <---------ANAC58              <---------REM1(2)                                               --------->O2                  <---------ZAT18                                               ==================bZIP_DOF    <---------ZAT14                                               <---------bZIP60(2)           --------->ZAT18                                               <---------TGA1a             <---------ZAT18                                               <---------ANAC58            --------->ZAT14                                               <---------O2                <---------ZAT14                                        <------ZmHOX2a(1)                  --------->ZAT18                                      <---------TOE2(2)            <---------At4g35610                                      <---------TOE1(2)            <------NtERF2  <-------TEIL                     --------->ANAC58                --------->LBD16 ------ZAT18       --------->TOE2(2)--------->TOE1(2)              --------->At4g35610 ---->ALFIN1  --------->At5g28300  --------->ANAC58              --------->ZAT18 --------PCF2----------->GT1       --------->ANAC46              <---------LBD16     ---------->DOF2 --------ANAC46  >>>>>>>>>MYB98    <---------ANAC55(2)<----------DOF2    <---------------AtSPL8     -   ggggtccatttcagacagtaacatatgagattataacacgtaggataagacgtggactttgtaatagtccgcagaagtgtacacactgaaagtaaacact  9256400                                                                                        <---------TGA1a                                                                                        <---------O2                                                                              <---------DEAR3(2)                                                                          <---------RRTF1(2)                                                                          <---------RAP2.6(2)                                                                          <---------RAP2.3(2)                                                                         <---------At5g28300                                                                 --------->DAG2         --------->O2                                                                ==================================bZIP_DOF                                                                ---------->DOF2===================MYC_MYB                                                              <---------AHL20(2)        --------->TGA1a                                                             --------->AHL20(2)<-------GAMYB                   --------->ANAC46                         <---------YAB1<---------RRTF1(3)                 --------->ANAC58        <---------ANAC58--------->AHL20(1)   <---------MYB46(3)                 --------->ANAC58        <---------ANAC58<---------AHL20(1)   --------->MYB55(2)  ---              <---------SPL7       <---------AHL20(2)    --------->AHL20(2)  <---------DEAR3(1)  ----            --------------->AtSPL8--------->YAB1         <---------AHL20(2)<---------RAP2.3(1) ------         --------->ZAT18   ----------->GT1           <---------AHL20(2)  <---------LBD16============= -------->ATHB12--------->SPL7   --------->AHL20(2) <---------YAB1----------->GT1 ----------->HVH21   gttcattgaattgcaccgtacgcacaatgttgaaaataaaaatgcgagtggatttttattttattaaaaagttattacggcggtttgacgacgtctgtaa  9256500                          <---------TOE2(3)          <---------ANAC58                              <-                          <---------TOE1(3)          <------MYB83                                  <-                   <---------ANAC58                  <------MYB46(1)                    --------->DREB2C(2)                   <---------ANAC46                  <---------ANAC46        <----------DOF2   <-----              <---------ICU4                         <---------ANAC58        <---------DAG2  <<<<<<<<              --------->MYB52(1)                   <---------ANAC46  <---------ARR11(3) ----------->HVH21              --------->YAB1             <------ZmHOX2a(1)           --------->ARR11(3) --------->At1g77200 ------->DOF2<---------AHL20(2)       <------ZmHOX2a(1)        <---------At4g35610     -------->ZAP1 ----->ICU4  <---------ATHB51       --------->ALFIN1<---------MYB46(3)    <-----------GT1  <---------ALFIN1 --->YAB1--------->AHL20(2) --------->ATHB12 --------->ALFIN1  --------->At4g35610   <---------WRKY18(1) ========bZIP_DOF  <---------ANAC58<------ZmHOX2a(1)--------->MYB55(2)  <----------DOF2--------->DEAR3(2)   taaagaaaacataaaataatggtgtgttaatgtttgaggaggaggaagtggtagtgggtgtattgtgctgagttctttactttattttgaccgacactgt  9256600                            <----------DOF2                           <---------ANAC58                           <---------ANAC58                        ------->MYC3                 <------MYB46(1)                 <------MYB83                 <---------MYB46(3)  <------ZmHOX2a(1)     <-------MYC3 --------LBD16   <---------DEAR3(2)                   ----------->GT1             <---------REM1(1) ----------RAV1(2)  <-------TEIL                  ---------->DOF2                 <---------ANAC46<-- ------HVH21    <---------DEAR3(1)          ------->TEIL           <------ZmHOX2a(1)           <----- <SUP          <---------ORA47(1)      <---------------------WRI1 ----------->HVH21  ----------->GT1   ctcaggatgtgtaaatggtcggttcatgtgctttcgccgaatgctgtatgtacaaagcgtaaaattggaggacaggtctaactggtgtagataataagga  9256700  Previous    Next  AGI:  At3g25500.1    Description:  AFH1 (FORMIN HOMOLOGY 1); actin binding. Identical to Formin-like protein 1 precursor (FH1) [Arabidopsis Thaliana] (GB:Q9SE97;GB:Q0WVK4); similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G43800.1); similar to Actin-binding FH2 [Medicago truncatula] (GB:ABN08988.1); contains InterPro domain Actin-binding FH2 and DRF autoregulatory; (InterPro:IPR003104); contains InterPro domain Actin-binding FH2 (InterPro:IPR015425) Range:  from: 9252330    to: 9256239    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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