Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ---------->DOF2                     --------->ANAC58                                            --------->MYB52(1)          --------->MYB46(3)                                                  --------->ANAC46        ----------->RAV1(1)                                                 ----------->RAV1(1) -->GAMYB --------->REM1(1)                                                 --------->AtMYB61 --->ANAC58          --------->ANAC58                            --------->TOE2(3)     --------->MYB52(1) --->ANAC58    --------->MYB52(1)                    <----------DOF2       --------->ANAC46 --->MYB46(3)--------->MYB46(3)                    --------->At4g35610--------->ARR14(2)            < ->MYB52(1)----------->RAV1(1)   --------->AtMYB61 <---------At4g35610<---------ARR14(2)         <---   gcagtgagagcaacaacaaatggaagcaaagcagaccaaaactgagacgaatcagctttctctgtaacatcagttccaccacaaaacgataacagagaca  9217300                                                    --------->ANAC46                                                    --------->ANAC58                                                    --------->bZIP60(2)                                                    --------->ANAC55(1)            --------->ANAC46                                                    --------->ANAC58     <---------At4g35610                                              --------->WRKY12       ------>MYB83 <---------LBD16                                            <-------GAMYB            <---------ARR14(2)                                           <---------MYB46(3)        --------->ARR14(2)                                           <---------ANAC46         --------->WOX13(1)                                          <------NtERF2            --------->AtMYB61                                        <---------ANAC46          --------->MYB46(3)------>NtERF2                                        --------->DEAR3(1)<---------ALFIN1<---------MYB52(1)                                        <---------DEAR3(1)--------->AtMYB61     <-----------GT1                                       ----------------------->TaNAC69(2)--------->At4g35610        <     <---------CCA1(2)               --------->ANAC46    --------->MYB46(3)<----------DOF2       ---- -----------GT1                    --------->MYB52(1)   ------>NtERF2------>MYB46(1)--------->LBD16 - -------TaMYB80             ------>NtERF2------>NtERF2 --------->DEAR3(1)--------->LBD16         ----   tattcccatctctccaatgtaatccaactctgcccataaacggcgtcgttgaacacgccaccactggaaccaatccgctgtttctccgccttagtctaaa  9217400     ----------->GT1                       --------->ZAT18                                   --------   ---------->DOF2                     <---------TOE2(3)                              <---------ANAC46 ---------HSFB2a(2)                   --------->DAG2                                  <---------LBD16 ----->GLK1(2)                       ---------->DOF2    --------->LBD16              <---------LBD16 -------->HSFB2a(2)                 --------->CCA1(2) <---------LBD16         <---------TOE2(3)  <--- ----->ARR11(3)                    --------->ARR11(3)--------->MYB52(1)  <------ZmHOX2a(1) ----------   atctagaaagttactaagcgatgaagaatggagagaagataaaggtgaactagaagaccggaattgacaattgaaggattgagatttagcgggaagatta  9217500                                    <---------MYB46(3)                                   --------->ALFIN1                                 --------->MYB55(2)                                 <---------MYB46(3)                                --------->ALFIN1                   <----------DOF2 <---------ANAC46       ---------->DOF2       <---------MYB46(3) ->ARR11(3)   <---------WOX13(1)<---------AtMYB61        ---------->DOF2                   --------->ATHB12 ------YAB1 --------->ATHB12 <-----------RAV1(1)---------->DOF2                           <---------YAB1 ->ARR10--------->DAG2     <---------At4g35610<---------------------WRI1                  --------->ICU4   tgaaattcagaaagtgattgtctttgtatagctggtggtgggagagacagagaagcgattaaagtcatttctatattggtctggattttgtaaagattgg  9217600                                       --------->At5g28300                                       --------->LBD16                                     <------NtERF2        <---------DEAR3(1)                                    ------>NtERF2        --------->DEAR3(2)                                   <---------ALFIN1   --------->ETT(2)                                   --------->DEAR3(1) --------->WRKY12                 <---------ANAC46 <---------ABI4(2)   <---------ETT(2)                <-----------------------TaNAC69(2)    --------->WRKY38(1)               --------->MYB52(1) --------->ERF1    --------->LBD16              ----------->HVH21   --------->ATERF1(1)--------->ALFIN1              ----------->TGA1  --------->ANAC46   <---------ANAC46            <------MYB46(1) ---------->DOF2        --------->DEAR3(1)            <------MYB83   ----------->HVH21      <------NtERF2           --------->MYB46(2)   --------->ANAC58 ------>NtERF2           --------->MYB111(1)  --------->ANAC58<---------bZIP60(1)          <--------P       <---------REM1(1)    --------->bZIP60(1) ----------->GT1  <---------AtMYB61     <------ZmHOX2a(1)     --------->ALFIN1  ----------->HVH21    <------ZmHOX2a(1)--------->ALFIN1   atttttaggagagtaggtgacggagagaggtgaagcgccaccgtgaaatgacgccgtggaccggcgaaggagggaaattgagagggtgaggtttggagtt  9217700                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                                                               ----------->ARR10                 <---                                                       --------->DAG2                            ----                    ----------->GT1                   ---------->DOF2                    --------->ATHB12             <------ZmHOX2a(1)                       <---------AHL20(2)                 --------->ICU4          <------ZmHOX2a(1)                        ----------->TBP                      <---------YAB1        --------->ALFIN1     ----------->GT1      --------->AHL20(1)                  xxxxxxxxxxxxxxx       <------ZmHOX2a(1)   *TSS   <------------CBF<---------AHL20(1)     <---------TOE1(3) <---------WOX13(1)    <-----------RAV1(2) --------->AHL20(2)       --------->AHL20(2)      <---------TOE2(3)<----------   gaagaagcaggaggaggaagaagcgataatatagaaaattggaatttggaaatatataaaggggaaagatttgttaaggtttgtttaggcatgattgaca  9217800                                       --------->O2                                       <---------TGA1a                                       <---------ANAC46                                       <---------ANAC55(2)                                       <---------O2                                       --------->ANAC55(2)                                       --------->bZIP60(1)                                       --------->bZIP60(2)                                       =============================bZIP_DOF                                       --------->TGA1a                                       <---------bZIP60(1)                                      <------NtERF2                                     ------>NtERF2                                    ----------->TGA1                                   <------NtERF2                                  <------MYB46(1)                                  <------MYB83                                 <---------DEAR3(1)                                =================MYC_MYB                                <--------P                               <---------ANAC58             <------------CBF  <---------ANAC58        --------->ANAC58      --------->MYB55(2)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ANAC46            <---------MYB46(3)                            <---------ANAC46   <-----  <---------bZIP60(2)         --------->ATHB12                         <------MYB83            <----- ------ANAC55(2)              <------MYB46(1)                          <------MYB46(1)         <----- ----->ANAC55(2)              <------MYB83               <----------DOF2  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxx>smallRNA(si3)  --------->At4g35610 ----------->HVH21             <---------MYB46(3)    <------- --CBF  --------->ANAC58   <------------CBF  ------>ZmHOX2a(2)       xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   agtgatgtgcaagaaaattgaacggctgagattggttggcgacgtgatcgtcgatgactctttctagcattgttggttttgtgtaggccttagttttgtg  9217900                     ----------->HVH21    <------MYB46(1)             --------->LBD16                   <---------ANAC46       <------MYB83                <-----------HVH21          <XXXXXXXXXXXXXXXXXXXXMIR865-3P --------->MYB46(2)          --------->ANAC46               < ----ANAC58        <---------ANAC58      --------->MYB111(1)        --------->LBD16                -- ----ANAC46        <---------ANAC58      --------->MYB59         <-----------GT1               ------ ----ANAC58   ------->TEIL               <---------MYB46(3)     <-----------GT1      <----------DOF2- --ANAC46<---------AtLEC2  <---------GLK1(2) <-------TEIL <----------DOF2   --------->YAB1    -------   tgagtgaatttggatgaatttgggtgaaagattgttgttttgtttggtacatgttggcatcttttttttccccgtcaaacatacttactttagcatcctt  9218000                                                      ---------->DOF2      <---------ANAC55(2)                   <---------ATHB12                    --------->AtLEC2  --------->YAB1                         --------->AtMYB61                      --------->ANAC58 ---------AHL20(2)                      --------->MYB46(3)                     --------->WOX13(1) ------->YAB1                          <<<<<<<<<<<<<<<<<LFY         ------>MYB83--------->ANAC58 >ZmHOX2a(1)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ATHB12 -------->AHL20(2)                   --------->MYB46(3)             ------>MYB46(1)---------->DOF2 -->TOE2(3)             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        ----------->RAV1(1)     --------->ANAC46   atattaatacttaaaaaaccaatacatggtttctaagcatccaccaatggtcttaacaaaggtgatgaccaacattctaatcaagcaaagtacaaaccac  9218100                                                        --------->GLK1(1)                                                     --------->LBD16                              --------->ANAC46     <---------LBD16                           --------->ZAT14         ------>ZmHOX2a(2)                           --------->At4g35610    <------ZmHOX2a(2)                   <----------DOF2   <----------ID1       <---------At4g35610      ------->TEIL            <---------AHL20(2)    <-----  <------ZmHOX2a(1)     --------->At4g35610      --------->ARR14(2)      --------->AHL20(2)   <------  xxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <---------ARR14(2)  <---------AHL20(2)    <---------   aagaggagacaaatttttgcaatagcatctgcacacagtgctagttcaatggatccggagtcccaatacatatatttaaaaatggactcttttatactaa  9218200  Previous    Next  AGI:  At3g25410.1    Description:  bile acid:sodium symporter family protein. similar to bile acid:sodium symporter family protein [Arabidopsis thaliana] (TAIR:AT4G12030.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO17710.1); similar to Os02g0475400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046843.1); contains InterPro domain Bile acid:sodium symporter; (InterPro:IPR002657) Range:  from: 9215576    to: 9217727    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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