Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->ATHB12                                                                 <---------YAB1      --------->ATHB51                                                               --------->YAB1       <---------AHL20(2)                    <----------DOF2---------->DOF2      ----------->GT1             <---------YAB1    --------->AHL20(2)        ----------->GT1       ---------->DOF2       <---------AHL20(2)   tcaaaatttaagaaactaatctctttttttttttgttaaaagaaactaatctcttaaagagtaaattataagaaaatttatgtcatattattggtttttt  9209800                                                                                 <---------YAB1                                                                              <---------AHL20(2)                                                                              --------->AHL20(1)                                                                              --------->AHL20(2)                                                                              <---------AHL20(1)                   <-----------GT1                             <---------HSFB2a(2)               <---------AHL20(2)                     <---------AHL20(2)     <---------AHL20(2)             <---------AHL20(2)              --------->YAB1    --------->HSFB2a(2)           <---------AHL20(2)          <-----------GT1<---------YAB1  <---------ARR11(3)          --------->AHL20(1)    --------->ANAC46 <---------AHL20(1)   --------->ARR11(3)          <---------AHL20(1)    <-----------GT1  --------->AHL20(1)  --------->CCA1(1)  <----------ID1        <---------AHL20(2)  --------->DOF5.7(2)  <---------ARR11(3)  --------->RVE1(1)  --------->ANAC46       --------->AHL20(2)  --------->TOE2(3)<---------ATHB12<---------YAB1   --------->AHL20(2)   gttaacatattatatatttttttcccaaacgtttacacaatttacaatcaatatttttaattgttatggaaatatctaattttattttagacgaaaaaaa  9209900                                                <---------ANAC46          ------->TEIL                 <-----------GT1             <----------DOF2          --------------->AtSPL3                <-----------GT1    ---------->DOF2     ----------->GT1--------------->AtSPL8        <      >>>>>>>>>MYB2  ------>ZmHOX2a(1)    ------>ZmHOX2a(1)       --------->YAB1               <-----   acttagaaaaccaagaatttatccttcttggtatgaacaaagtccttctttggtgtaatgtataactatcaaaacgtacttactctgaaattgttctctt  9210000                                                                                <------------CBF                                                                               --------->ATHB12                                                                               -------->ATHB1                                                                               <--------ATHB1                                                                               --------->ATHB51                                                                               <---------ICU4                                                                               <------------ATHB5                                                                              <---------ATHB51                                                                              <---------YAB1                                                <---------AHL20(2)            <---------ATHB12                                                --------->AHL20(1)          --------->WOX13(1)        --------->REM1(1)                       --------->AHL20(2)         --------->AHL20(2)     ------>ZmHOX2a(1)                       --------->YAB1               ------------>CBF    <---------ANAC58                       --------->AHL20(2)           --------->YAB1    <---------ANAC58                      --------->YAB1             --------->YAB1  <---------ANAC58 ---------GLK1(2)                        --------->AHL20(2)        --------->AHL20(2)<---------ANAC58 -----DOF2                     ------------------------>ANAC81----------->GT1 --------->ICU4     <---   tagattccttacatcattctgatgtattctcaaaatgcaaaaaataaaaataaaataactaaaaccgaaaaaaataatcaattattggctagtccatgtt  9210100                  <-------MYC3                                              --------->ANAC46                  ------->MYC3                                              --------->ANAC58          --------->AtMYB61                                        --------->At5g28300       --------->ANAC58                                      <----------DOF2--------->ANAC58       --------->ANAC58                                ---------->DOF2    *TSS       --------->ANAC46                            --------->LBD16 <-------GAMYB     <---------ALFIN1                              ------>NtERF2 <---------TOE2(3)     --------->ANAC46        <-----------GT1     <---------LBD16 <---------TOE1(3)--------->MYB46(3)<   <-----------GT1------->MYC2               <---------AHL20(2)------------>AtMYB77       <---------ARR11(3) ------AHL20(2)   <-------MYC2    <---------ALFIN1--------->ANAC46----------->GT1--------->AtLEC2<<<<   aaatttcacacaccaaaacacatgctagttttatctccaccttctatttattccgccaaaagcctttacggttactacaagccatccaacaatgtcttct  9210200            --------->GLK1(2)      --------->LBD16     <---------HSFB2a(2)     <---------ANAC46     <---------ANAC58     --------->HSFB2a(2)                                   <-----------HVH21              ------>NtERF2     <---------ANAC58                                  <---------DEAR3(1)                 --------->LBD16     --------->ANAC55(2)                     <-----------ARR10                          <---------LBD16     <---------ANAC55(2)        <---------ANAC58      --------->ZAT2               <---------DAG2 <<<<<<<<TBF1           ------>ZmHOX2a(1)<---------At4g35610                       <----------DOF2 <<<<<TBF1 <---------GLK1(2)    <---------ANAC58    --------->DEAR3(1)   --------->ANAC46<---------LBD16   tcttcttccgtaagaatctctctctccttcattttcttggctctgctaatctcaccggctgtgtcacaaacatgtaagtcacagactttttccggcgata  9210300                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                -----                      ------>MYB83                                                             <-----                      ------>MYB46(1)                                                       ---------                 <---------WRKY18(1)                    --------->YAB1                      <--------                --------->WRKY12                       <---------ATHB12                     <--------                --------->WRKY38(1)                  ------>ZmHOX2a(1)                      ---------                ----------->HVH21             --------->ICU4                     --------->ATERF1(1)-              <---------ANAC58                <---------YAB1                    <---------ATERF1(1)--        <---------ALFIN1--------->ANAC46 --------->TOE2(3)                      <---------RAP2.6(3)--   -------->P <---------ANAC58  ---------->DOF2<---------ICU4      --------->ZAT6<------NtERF2<------   aaacttaccctcactgccttgacctccctcaactcaaagccttccttcattattcctatgatgcctctaacacaactctggccgtcgtcttctctgctcc  9210400   ---------->DOF2 <------NtERF2 ----->NtERF2 ------->DEAR3(1) --------ATERF1(2) ------->RRTF1(2) ------->DREB2C(2) ------->RAP2.3(2) ------->RAP2.6(2) -------LBD16 ------>ATERF1(1) ------>ERF1 ------>ORA47(2)         --------->ALFIN1 ------>RAP2.3(1)      <---------ANAC58 -->NtERF2             <---------O2 ------ATERF1(1)       <---------ANAC58                                                            <- ----->LBD16  <-------GAMYB                                   ------>ZmHOX2a(2)                    -- ---->DEAR3(1)<------NtERF2                                  --------->GLK1(1)                     <- ----LBD16   <---------SPL7                                  <------ZmHOX2a(2)             --------->ANAC46 >ZAT2      <---------ANAC58                                <---------ARR14(2)           <-----------RAV1(2) -ZAT2 ----------->RAV1(2)<---------DEAR3(1)                <---------AGP1               ============ -At4g35610 <---------ANAC46                                --------->ARR14(2)         <------ZmHOX2a(2) >At4g35610 <---------ANAC58<---------------------WRI1     <---------CCA1(2)          --------->ARR11(3) -------->LBD16        <---------ANAC46              <---------AtMYB61                <---------ARR14(2) ------->RAP2.3(3)   ------>ZmHOX2a(2)            <---------MYB52(1)                  --------->ARR14(2) ------->ATERF1(2) >>>>>>>>>>GATA-1           -------->P --------->ETT(1) ---------->ID1------>ZmHOX2a(2) ---ATERF1(1)<---------MYB46(3)               --------->MYB52(1)         <-----------HVH21--------->LBD16   gccggcaaagcctggcggatggatcgcgtgggcgattaatccaaaggctaccggtatggtcggatctcaaacccttgtcgcttacaaggatccaggtaat  9210500                                                                                                 <---                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              <------                                                                                             <-------                                                               <-------GAMYB                 --------                                                             <---------ANAC58               <--------                                                             <---------ANAC46               <--------                                                             <---------ANAC58               <--------       --------->ALFIN1                                 --------->ZAT2           ---------->DOF2<----     <---------ANAC46                                   <---------ZAT2         <---------YAB1<------NtERF2     <---------ANAC58                                   <---------At4g35610  --------->CCA1(2)<------     <---------ANAC58                             --------->LBD16    --------->ATHB12      --------->ALFIN1 ----------RAV1(1)      --------->TOE2(3)        <---------ANAC46   <---------YAB1         <---------DEAR3(1) ------->ALFIN1        <---------ICU4    <---------At4g35610<------NtERF2   <---------ARR14(2)<------ --------REM1(1)--------->ANAC58       --------->ZAT18  --------->At4g35610 --------->ARR14(2)------- ==========RAV  --------->ANAC58 ------>ZmHOX2a(1)<-----------HVH21<---------TOE2(3)      <------ZmHOX2a(1)   ggtgttgccgtggtgaagacgctaaacattagctcctatagctcgctgattccgtcgaagctggcgtttgatgtttgggatatgaaagccgaggaggcgg  9210600    --------->ALFIN1  --------->CCA1(2) ------ANAC46 ---->ATERF1(1) ----ERF1 ----ATERF1(1) >NtERF2 ----RAP2.3(1) ----ORA47(2)                                       <------MYB46(1) ----DEAR4(2)                                       <------MYB83 ---ANAC46                                  <---------At4g35610 ---RAP2.6(2)                              --------->LBD16 ---RAP2.3(3)                  <---------ZAT6      --------->MYB111(1) --ABI4(1)            <---------ICU4<---------TOE1(3) ->ATERF1(1)        --------->ARR14(2)     ------>NtERF2 -ATERF1(1)         <-----------ARR10     <---------RAP2.6(2) -DEAR4(2)          <---------ARR14(2)    <---------ANAC46 -RAP2.3(1)         <---------ARR11(3)   <---------LBD16           ----------->GT1       <------MYB46(1) --NtERF2<------ZmHOX2a(1)    <---------TOE1(3)    <---------AtMYB61                    --------->MYB59 ---DEAR3(1)        --------->GLK1(2)  --------->ARR14(2)         --------->DAG2       <--------P   - ---RAP2.3(2)       --------->ARR11(3) <---------ARR14(2) ---------->DOF2     --------->ALFIN1------>ZmHOX2a(1) -->ATERF1(2)      <---------GLK1(2)<---------TOE2(3)   <------NtERF2  --------->WOX13(1)<------MYB83   cgagagatggaggaagtttgagaatctttgctagggttaaggttccggctgatttggtggcaaagggaaaggttaatcaggtttggcaagttggtcctga  9210700  Previous    Next  AGI:  At3g25290.1    Description:  auxin-responsive family protein. similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G12980.1); similar to unknown [Populus trichocarpa] (GB:ABK94382.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613); contains InterPro domain Uncharacterised conserved protein UCP037471 (InterPro:IPR017214); contains InterPro domain DOMON related (InterPro:IPR005018) Range:  from: 9210174    to: 9211836    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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