Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------YAB1                          -----                                          --------->ANAC58      <------ZmHOX2a(1)         --------->AHL20(2) ------->AHL20(2)                         ----------->GT1--------->ATHB12        <---------ICU4 ----- ------->GT1    ---------->DOF2           --------->ANAC46    <---------TOE2(3) <---------YAB1  ----- ---->DOF2<---------AHL20(2)              --------->ANAC58 <---------WOX13(1)  <---------AHL20(2) ---AHL20(2)---------->DOF2     <----------ID1    --------->AHL20(2)          --------->YAB1   <-----   agtaaattagatttaaaagaaagtgagtgtataagagacaaaacacgaaaaaaaaaatatgattgaggatgacaaatggattataatttcatatatatac  9189000                                                                             ------->TEIL                                                                             --------->ARR14(2)                                          <---------ICU4                     <---------ARR14(2)                                          <---------AHL20(2)     <---------AHL20(2)                                          --------->AHL20(2)     --------->AHL20(2) ---->ANAC55(2)                          --------->ICU4         <---------AHL20(2) ---->ANAC46           --------->YAB1    <---------YAB1      --------->AHL20(2) ---->YAB1            <---------YAB1  --------->ICU4         <---------AHL20(2)                     - --TEIL      ----------->GT1       ----------->GT1          --------->AHL20(2)                  -----   ataatgaattcaagcttgtaacttatgaaaatttagggggataattaatactcaattctagatttatttatttgcaacgtatccatctatacctagagaa  9189100             --------->ANAC58     --------->AHL20(2)     <---------ICU4     <---------AHL20(2)                                                   --------->GLK1(2) ---------     <--------ATHB1        ---------->DOF2                           <---------YAB1       <---------WOX13(1)     --------->ATHB51--------->ARR11(3)                            ----------->GT1       <---------ANAC58    --------->ICU4   <---------ARR11(3)                    --------->ARR14(2)            <---------ANAC58  --------->YAB1     --------->GLK1(2)                     <---------ARR14(2)            <---------AtLEC2 <---------AHL20(2) --------->RVE1(1)                   --------->HSFB2a(2)          <----------DOF2 -------->AHL20(2)  --------->CCA1(1)                   <---------HSFB2a(2)         <---------ANAC58 ---->GLK1(2)--------->ANAC58   ----------------->AGL2 <---------LBD16--------->YAB1<---------ANAC58   tttttaataatttgtaagcaaaaaatcttgaaagaccacaaatggatttgaatttgttctggatttgtactgtgataatccattttgctttgcttgatta  9189200                      <--------ATHB1                      --------->ATHB51                      <---------AHL20(2)                      --------->AHL20(2)                --------->YAB1                ----------->GT1   <---------YAB1            --------->ATHB12      --------->ICU4           <---------YAB1      <------ZmHOX2a(2)                                                    -     <---------DAG2   <---------ICU4                                                              ---     <----------DOF2 --------->ICU4                                                              ----  <-----------GT1    <---------ATHB51                                       ------>ZmHOX2a(2)   ----- >ATHB12 <-----------GT1      --------->ARR11(3)               <-----------RAV1(1)           --------   gtttttactttttaccattggtaataatttgggatcatgtttagttgtttactagataaccaattttgttgggcctgatccaacaattttgccgattata  9189300                                                          --------->HSFC1(1)                                              <------ZmHOX2a(2)           <---------TOE2(3)                                          <---------ANAC46<---------HSFC1(1)------->GAMYB                                          <---------ANAC55(2)  --------->HSFC1(2)               -----                                          --------->ANAC55(2)  --------->HSFB2a(1)          <--------      ----------->GT1                   --------->MYB52(1)<---------HSFB2a(2)          <<<<<<<ZML2<-- -------->AHL20(2)               <-----------GT1      --------->ZAT14    <-----------GT1    <-------- -------->GT1                <---------AHL20(2)  --------->At4g35610<----------DOF2 --------->HSFB2a(2) ----->DAG2                --------->AHL20(2)--------->ARR14(2)--------->MYB46(3)   <---------HSFB2a(2) ----->DOF2                <---------AHL20(2)<---------ARR14(2)<---------HSFC1(2)   --------->HSFC1(1) ->YAB1              ------------>CBF  ----------->HVH21  --------->HSFB2a(2)       <---------HSFC1(1)   aagtaaataagtgaatagttaagcccaatataaatttacgagtgacggatcatctgtgttctcgaaccatctttttaacgaactctctagaacccttttt  9189400                    --------->TOE1(1)                    --------->TOE2(1)                ------>MYB83                -------->P                ------>MYB46(1)               <---------ALFIN1     --------->ANAC46     --------->ANAC58     --------->ANAC58                         <------------------------ANAC81   <-----------GT1*TSS              ------>MYB46(1)            <----------DOF2 ----->ID1     ------>MYB83         ------>MYB83            <---------ANAC58 -DAG2      --------->ANAC46       --------->WOX13(1)       <---------ANAC46 --------DOF2  ------>MYB46(1)    --------->AtMYB61         <---------ANAC58 --DOF2--------->ANAC46           --------->MYB46(3)    <----------DOF2               ---------->DOF2   ctttttcacccaaaacccaacctcgtataaatctcaccaatccatttcttctcttcttctttgcgttttttgtttggaactgaatcgaaaaagatggatg  9189500                                                               <------NtERF2                                                               --------->ATERF1(1)                                                              ------>NtERF2                                                              <---------ATERF1(1)                                                              --------->ABI4(2)                                                              <---------RAP2.3(1)                                                             --------->DEAR3(1)                                                             <---------DEAR3(1)                                                            <------NtERF2                                                            --------->ATERF1(1)                                                            --------->RAP2.3(1)                                                           <---------RRTF1(1)                                                           <---------ERF1                                                           ------>NtERF2                                                           <---------ATERF1(1)                                                           <---------DEAR4(2)                                                           <---------RAP2.3(1)                                                           <---------ORA47(2)                                                          --------->ATERF1(2)                                                          <---------RRTF1(2)                                                          <---------RAP2.3(2)                                                          <---------RAP2.3(3)                                                          <---------ATERF1(2)                                                          <---------bZIP60(2)                     <-------GAMYB                        --------->bZIP60(1)                   -----                    <------MYB46(1)                       <---------bZIP60(1)                   <----                    <------MYB83                          <---------O2                         ------                    <---------DEAR3(2)                    <---------DEAR3(1)                   <-----                   --------->MYB55(2)                     <---------RRTF1(3)    <------MYB46(1)------                   <---------DREB2C(2)                   --------->ATERF1(1)    <------MYB83  <------                   <---------DEAR3(1)    ------>NtERF2  <---------ATERF1(1)     <---------DEAR3(2)                   <---------MYB46(3) ------>NtERF2    ----------->HVH21       <---------DREB2C(2)             ------>NtERF2           --------->DEAR3(1)----------->TGA1        <---------DEAR3(1)     --------->HSFB2a(2)           ------>NtERF2 <---------GLK1(1)  <---------CCA1(2)         -------     <---------HSFB2a(2)          --------->DEAR3(1)  <-----------HVH21   ---------->DOF2---------->DOF2   ctaatttcgagatgcctccagtcggtggaatgaacgacgacgacgacatggatttcggtgacggcgcctcgtttcttaaagtcggtgaagagaaagagat  9189600                                                   --------->LBD16                             <-----                                                   ------>ZmHOX2a(1)               --------->AHL20(2)                                             ------->TEIL                          <---------AHL20(2) ---->CCA1(2)                          <---------ARR14(2)                      <---------AHL20(1) --ZmHOX2a(2)            ---------->DOF2--------->CCA1(2)                      <---------AHL20(2) --->AGP1         <---------HSFC1(2)<---------TOE1(3)                          --------->AHL20(2) ----ARR11(3)     --------->HSFB2a(1)  --------->ARR14(2)                      --------->AHL20(1) --->ARR11(3)     <---------HSFB2a(1) <------ZmHOX2a(1)                  ----------->GT1       ------ ---GLK1(1)       --------->HSFC1(2)<---------TOE2(3)                   <---------TOE1(3)      <----- -->GLK1(1)  >>>>>>>>>TBF1       --------->ALFIN1----------->RAV1(2)    <---------TOE2(3)     <------   ccaacaaggtttgaagaagaagcttcttaaagaaggtgaaggatatgaaactcctgagaatggcgatgaagttgaaggtaattaattaatcgattcagat  9189700                                                                                       <XXXXXXXXXXXXX                                                                                     ----------->HVH21     <----------DOF2                                            --------->ZAT14      <----------ID1     <---------DAG2                                             <---------ZAT14  --------->ATHB12    <---------ANAC58                                       <---------ZAT18     <---------WOX13(1)    <---------ANAC58                                       --------->ZAT18     <----------DOF2 ----ARR14(2)                                              <---------ZAT14    <---------AtLEC2 --->ARR14(2)  --------->MYB59             --------->ATHB12--------->ZAT14    <---------ANAC58 ----GLK1(2)   <---------TOE2(3)  <---------ANAC58    --------->ZAT14         <---------ANAC58 ---At4g35610  <---------TOE1(3)  <---------ANAC58    <---------ZAT14     <----------DOF2   actaatgcttttcgatttaggtttttttgaatcgaagcttgagcttgatttgtttctgcagtgcattacactggaactttgcttgatgggacgaagtttg  9189800                                                                                   --------->LBD16                                                                                  <---------ANAC46                                                                         ------>MYB83                  --------->ANAC58                                       ------>MYB46(1)                  --------->ANAC58                                     <---------MYB59       <---------YAB1                                                --------->ARR11(3)     <---------ANAC58                                                <---------ARR11(3)     <---------ANAC46                                            ---------->DOF2  <---------ANAC58     <---------ANAC58 <----------DOF2                      <---------At4g35610 <-----------GT1   <--- XXXXXXXMIR165A/B>>>>>>>>>MYB2 <-----------GT1    <---------YAB1------>ZmHOX2a(1) <---------ANAC58   attcgagtcgtgatagagcaacgcctttcaaattcactcttggacaaggtttgtgattctcatctcctaaagacctaatagtttccgtatagttagtaat  9189900  Previous    Next  AGI:  At3g25230.1    Description:  ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase. Identical to 70 kDa peptidyl-prolyl isomerase (ROF1) [Arabidopsis Thaliana] (GB:Q38931;GB:Q38949;GB:Q9LSF3); similar to peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G48570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15270.1); similar to 70 kDa peptidyl-prolyl isomerase (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (GB:Q43207); similar to hypothetical protein OsI_028939 [Oryza sativa (indica cultivar-group)] (GB:EAZ07707.1); contains InterPro domain Range:  from: 9189418    to: 9192656    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version