Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------------AGL15                 --------------->AGL15      --------->ATHB51                                        --------->TOE2(3)      <---------ICU4  ---------->DOF2                         --------->TOE1(3)       <----------DOF2     --------->ICU4 --------->AHL20(2)                        --------->YAB1       <---------AHL20(2)     <---------YAB1 <---------AHL20(2)                      ------->TEIL       --------->ATHB12 ---YAB1         <---------------AGL15                     <---------CCA1(2)   <--------HAHB4 --DOF2<------------CBF            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     --------->YAB1          -   ttacaccataattgtttttcatttaaaaggaaaccttgagtagtcatcgatgttggcatttgaatcttaaacagcctagaatcatttactttgctagttg  9185800         <---------AHL20(1)         <---------AHL20(2)         --------->AHL20(1)        --------->YAB1        <---------AHL20(2)        --------->AHL20(2)       <---------YAB1     --------->ATHB51     <--------HAHB4     <--------ATHB1                                                           ------------>CBF     --------->YAB1                                                         ------->PIF5     <---------ICU4                                                         <-------PIF5    --------->AHL20(2)                                                     <---------ANAC58    --------->ICU4                                                         <---------ANAC46    <---------ATHB51             <-----------RAV1(1)                       <---------bZIP60(2)    <---------ATHB12             <---------YAB1                            <---------ANAC58  -------- ----------->CBF         --------->TOE2(3)                                <-----------------------TaNAC69(2)   aagacaataattatattttggtcataacattagttatgttggcagttctaaaatgacaacttggccagaatagaacgacgtgcaatcgcagataatcaga  9185900                                                                          ------>ZmHOX2a(2)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                   <-------MYC3                                                                   ------->MYC3                                                                  --------->O2                                                                  --------->TGA1a                                                                  <---------O2                                                                  ======================bZIP_DOF                                                                  <---------TGA1a                                                    <---------ALFIN1  <---------MYB46(3)       ----------------->AGL1                   ------>NtERF2--------->PCF2  <----------DOF2  <------------CBF   <---------------AtSPL8     --------->ABI4(2) ======================bZIP_DOF --------->ATHB12    --------------->AtSPL8     <---------ZAT18  <---------TOE1(2) ->YAB1------------>CBF  ------------>CBF  <---------At5g28300  <---------ALFIN1      <----------DOF2   aaaacattggccaatttagtaaacatgtacaatcttccaattgtttacggtgcccctctctcagtcccacgttggatcggtttttgggcttttaagtcta  9186000                  <---------MYB59                ------>MYB46(1)              <---------MYB59              --------->DEAR3(1)                                                 <---------TOE1(3)              --------->MYB46(3)                                                 <---------TOE2(3)             --------->DEAR3(2)                                               <---------MYB52(1)             -------->ZAP1                                              ------>ZmHOX2a(1)           <---------WRKY18(1)                 <------MYB46(1)          <----------DOF2           <-----------GT1                     <------MYB83         --------->ARR14(2)      <---------YAB1                          --------->MYB59<---------YAB1  <----------DOF2   ------ ----------->GT1------>MYB83     <------------------------ANAC81    <---------ARR14(2)--------->MYB52(2)   atttagtgaatattgaccgacccaattgagttttttgggtttatttgtttggttctgtctattgtcatcgaatcctttcctttagggtttgtttctgcat  9186100                                                                                              <------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                   ------>MYB46(1)                                                                                   ------>MYB83                                    --------->ANAC58                               --------->MYB52(1)                                    --------->ANAC58                             <---------MYB46(2)                                    ----------->GT1                              <---------MYB59 ----                             --------->ANAC46              <---------YAB1  --------->TOE1(3) --------                             --------->ANAC58          <-----------TBP   <---------TOE2(3)   -------- ->TEIL   --------->YAB1     --------->ANAC58    <----------DOF2         <---------TOE1(3)   <-------   cttcaatttgtttcataaatcacacataaacagggaacaagtaaaatacttctttggttttatatttgttttgttaaggttaacctaactagttttccat  9186200       *TSS ---------AGL15 -->TOE2(3)<---------MYB52(2) -------->AGL15                                              <---------ATHB12           --------->ZAT18 ----------AGL2                       --------->ATHB12--------->CCA1(2)             --------->ALFIN1 --------->AGL2                      ------>ZmHOX2a(1)<---------GLK1(1)         xxxxxxxxxxxxxxxxxxxxx --------->AGL1                   <------ZmHOX2a(2)   --------->GLK1(1)         <------NtERF2 ------>DOF2                     <---------ARR14(2)  <---------ARR11(3)       <---------ANAC46 --------->AG--------->MYB52(1)  --------->ARR14(2)  --------->ARR11(3)      <---------LBD16 --------->AGL3           <----------DOF2   <---------WOX13(1)          --------->ARR14(2)        --- ----------AGL3       --------->ZAT18<---------YAB1<---------TOE2(3)    <---------ARR14(2)        <--   aaagagaacgagaactaacgagtttgcgctatatcgatcctcattgaatgactaagatatccaatcttccaagggatttggcggaagaggtgctctgtag  9186300        <---------O2        --------->TGA1a        <---------TGA1a        <---------bZIP60(2)        --------->bZIP60(1)        <---------ANAC58        <---------ANAC58        --------->O2       ----------->STF1      <---------DOF5.7(2)     --------->WRKY38(1)     ----------->HVH21     --------->WRKY12                             --------->ANAC58    --------->DOF5.7(2)                           --------->ANAC58    <---------MYB52(1)                            <---------ANAC55(2)   <---------At4g35610                     --------->ALFIN1   ===============MYC_MYB                 ------->MYC3   <-------GAMYB                          <-------MYC3         <---------YAB1                     ---  <---------ANAC46                --------->AtLEC2--------->ANAC55(2)                           ----- xx>smallRNA(si3)            ------>ZmHOX2a(2)    --------->ANAC55(1)              ------->TEIL ----- ------>GLK1(1)            --------->ARR11(3)     --------->ANAC46         ---------->DOF2      ----- -------GLK1(1)            <---------ARR11(3)   <---------ALFIN1      <----------DOF2          ------   aattccgttgacgtctctgagaactgtttgatcttcttgcaaaacgtggaacacgttatccaaatatgagagctttgcaaagaagtaccttggtgatcaa  9186400                                                     ----------->GT1           ---------->DOF2              --------->ICU4      <---------At4g35610               <---------YAB1      --------->At4g35610            --------->ICU4 <---------TOE2(3) ------>YAB1                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ---->AtLEC2                 --------->YAB1   ------->TEIL  <---------WOX13(1)                     -- ---->ANAC58                <---------YAB1 <---------YAB1<---------AHL20(2)          <---------TOE2(3) ---->ANAC58              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)              --------->YAB1     <------ --->WOX13(1)   ---------->DOF2<---------AtMYB61    <---------TOE1(3)   --------->WOX13(1)    -------   gcaaaattagctgcaaaggaaagagagtttatgatggtcgtgatgatgaattttagggtttaattgatgagagtcaatcttcaaaacaaggttgaatcat  9186500                                                                  --------->ZAT14            <xxxxxxx                                                           <----------DOF2                <xxxxxxxxxx --------->GT1                                   --------->ARR11(3)             <---------YAB1    --- ---ICU4                                         <---------ARR11(3)    ----------->GT1    --------->At4g35610 -->YAB1<---------ANAC55(2)                     <---------CCA1(2) <---------ZAT14    --------->YAB1   catgtataaaacgtgaagctaaacttattagtttaggcgatgaagttgatatatctcaagtctttcactgcaacggtttattgttattcatcagcatcac  9186600                                                                        <------------AtMYB77                                                                      --------->ARR14(2)                                                                      --------->MYB52(1)                                              -------->P    --------->PCF2  ----------->RAV1(1)                                            --------->KAN4(2)  ----------->RAV1(1)                                  --------->ATHB12  --------->SPL7 --------->YAB1                                 <---------YAB1   <---------SPL7   --------->ANAC55(1)                    <---------ANAC46       <----------TaMYB80--------->DEAR3(2) xxxxxxxxxxxxxxxxsmallRNA(si3)--------->LBD16 --------->MYB52(1)   --------->ANAC46 xxxxxxxxxxxxxsmallRNA(si3)  <---------ANAC55(2) --------->ANAC46<---------ALFIN1                <--- ------->DOF2     <---------MYB46(3)<---------WOX13(1)  <------ZmHOX2a(2)------->GAMYB   ----------->GT1   caaagacaagactaggctagtggtttggaacccgtatgattggggacatacccgtacgatcgaacccacacataactgccacatattcaataggtataat  9186700  Previous    Next  AGI:  At3g25220.1    Description:  FKBP15-1 (FK506-binding protein 15 kD-1); FK506 binding / peptidyl-prolyl cis-trans isomerase. Identical to FK506-binding protein 2-1 precursor (FKBP15-1) [Arabidopsis Thaliana] (GB:Q38935;GB:Q9LSF4); similar to FKBP15-2 (FK506-binding protein 15 kD-2), FK506 binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT5G48580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24578.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179); contains InterPro domain Endoplasmic reticulum targeting sequence; (InterPro:IPR000886) Range:  from: 9183853    to: 9185916    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g25221.1    Description:  unknown protein Range:  from: 9185925    to: 9186029    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g25225.1    Description:  pseudogene, hypothetical protein Range:  from: 9186207    to: 9187408    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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