Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------AHL20(2)                                                   ------>MYB46(1)                                                   ------>MYB83--------->AHL20(2)              <-----                                        <------MYB46(1)   <---------YAB1                       <-----                      <----------DOF2   ----------->GT1  --------->ARR11(3)   ------>ZmHOX2a(1)------        ---------->DOF2         --------->YAB1   <---------MYB59   <-----------GT1   <---------YAB1<-    <---------YAB1   <---------DAG2     <------MYB83     <---------ARR11(3)  --------->TOE2(3) ------ -----DOF2----------->GT1       <-----------------AG  --------->YAB1     --------->YAB1        <----- ----DAG2--------->DAG2  --------->YAB1--------->MYB59--------->AHL20(2)<-------TEIL--------->AHL20(2)   tttagtatgaaaaagtgaaattgccttttataaaacataatttggtaaataccaaataatatcatttttttacattcatcctaaatttttatactaatat  9175300                                           ---------->DOF2                              --------->ANAC58                  <-------TEIL ----ICU4                     --------->ANAC46  --------->CCA1(2) ----AHL20(1)                 --------->ANAC58 --------->ARR11(1)<---------ANAC58 --->AHL20(1)            --------->At4g35610   <---------ARR11(3)<---------ANAC58 --------YAB1    <---------TOE2(3)   ----------->GT1            ------->TEIL                   ------ --->ARR11(3)   <-----------GT1     --------->DAG2          <---------------AtSPL3           -------- ----ARR11(3)   --------->MYB52(1) ---------->DOF2          --------->MYB59          <-----------HVH21   tttcatttgcaagtttattaacgaatcaactcaagcaaaaagtataaaagatttgaattggttatgtacgtgtgtatatatcaaacaggtcgcattcaaa  9175400             --------->ARR11(3)                                                                     <             <---------AHL20(1)                                                                     <      --------->ICU4                                                                           <-----      --------->GLK1(2)  ----------->GT1                                --------->YAB1         <----- ---->DOF2   --------->AHL20(1)                                    --------->MYB46(3)    ----------->HVH21 ->YAB1     <---------CCA1(2)               --------->YAB1       <-----------GT1    --------->YAB1 <-   agttcgaaattcttatatattggaaacaggtaaatactaaatagtattgtaatccgattcactaaattaaccaatagtattgtttatcacgatgacactt  9175500                                                                        --------->AtMYB61                                                                        --------->ZAT6    <------NtERF2                                                       <---------ALFIN1   <---------MYB46(3)                                                  --------->MYB46(3)  <---------DEAR3(1)                                       --------->DOF5.7(2) ---------ANAC58         <---------YAB1                 <---------TOE1(2)     --------->ZAT6 ---------ANAC58      --------->GLK1(2)           <---------ZAT6     <---------ALFIN1 -----DOF2  <-----------GT1                   --------->ZAT14        --------->ANAC46 ----DAG2 <---------AHL20(2) <-----------GT1  --------->ZAT18<---------DOF5.7(2) --------MYB46(3)    <---------GLK1(2)        <---------ZAT14<---------At5g28300          <----------DOF2   ttgggtggctattttatccatccgattcttatttccactctaaataagtgtagtgtccaacgttaccgtctccaccactaccactatgctatctttttct  9175600               <------MYB83               <------MYB46(1)               --------->ANAC55(2)               ----------->GT1               <---------ANAC55(2)                                                              -----              --------->MYB59                                     <---------ANAC58             <-----         <---------AHL20(2)                                       <---------ANAC46            *TSS         <---------YAB1                                           <---------ANAC58           --------      <---------AHL20(1)                                 --------------->AGL15             ----------      --------->AHL20(1)                                 <---------------AGL15          =============   --------->AHL20(2)              ---------->DOF2      <-----------------AGL2          ------>ZmHOX2a(1)   <---------AHL20(2)       --------->YAB1              <-----------------AGL3   --------->ANAC58  --------->YAB1          <---------YAB1              <-----------GT1            --------->ANAC58   - ----------->TBP    --------->MYB46(3)      <-----------GT1----------->TBP       --------->ANAC46   <   cttataaaaatattattaggtaacaactattaataaacaaagctatatactctatttttctatataaggcgtgagttctccacaagcctcctcatcaatc  9175700          --------->YAB1        --------->ANAC58    <---------ANAC55(2)    --------->ANAC58    --------->ANAC58                                                  --------->MYB46(3) <------ZmHOX2a(2)                                                   ---------->DOF2 ---->YAB1<---------ICU4                                    <---------HSFB2a(2) ----ATHB12                                                 --------->HSFB2a(2)    --------->YAB1 ->WOX13(1)  --------->ZAT6                              <----------DOF2     --------->ANAC46 -->CBF --------->ANAC58                               <---------At4g35610   --------->ANAC58 =======HOX2a_HOX2a                                    --------->At4g35610   --------->ANAC58 -------->ARR11(3)  --------------->AtSPL8      <---------TOE1(2)   --------->MYB52(1)         ------ ---------ARR11(3) <----------DOF2--------->ANAC46  <-------TEIL  <---------MYB52(2)         <-------   aagatcaagtaagcatcactactttgtactaaatccaaaccatgacttccaacgttcagctttcagaaacaaacagcccaaggaatcagaaaacccgtcc  9175800                                                                   --------->MYB52(1)                                                          <---------ANAC58                                                          <---------AtLEC2                                                          <---------ANAC58                  --------->ZAT14                         <---------ANAC46                         --                  <---------ZAT14                <---------At4g35610                               --                  <---------ZAT18                --------->ZAT2  --------->ATERF1(1)               -- <---------At4g35610                <---------ZAT14 ------>NtERF2--------->MYB46(3)                <- --------->At4g35610      --------->AtLEC2    ----------->ARR10  --------->DEAR3(2)               <-- <---------ZAT14  --------->ZAT18 --------->At4g35610 <---------ANAC58                            <-- --->SPL7    <------ZmHOX2a(1)    <---------ZAT2 --------->At4g35610 <---------ATHB12             --- ----HVH21<------ZmHOX2a(1)       <---------At4g35610 <---------ANAC58         <-----------HVH21 <---   gagagcagagaaggaggaagtggactacatgcagagagctcagtggctaagagctgccttgcttggagccaacgatggtctggtcacagtcgcttcgcta  9175900         <------MYB46(1)         <------MYB83         <---------MYB46(3)        <---------AtMYB61       <---------------------WRI1       <--------P      <-------GAMYB                                                       <----------DOF2     --------->ALFIN1                                                    <---------ANAC58   <---------ANAC46                                                 --------->LBD16   <---------ANAC58                                                 <---------MYB46(3)   <---------ANAC58             --------->ANAC46         ------>NtERF2   <---------ANAC46  <---------MYB46(3)            --------->ANAC58      <---------At4g35610<---------ANAC58 ------>HAHB4                   --------->ANAC58<---------MYB46(3) <---------ANAC58 ------->ATHB12               ---------->DOF2   <------MYB83  <-----------RAV1(1) ------->YAB1              <-----------HVH21    <------MYB46(1)    <---------ANAC55(1) --------ICU4             <----------ID1       <---------TOE1(2)   <---------ANAC46 -------YAB1              <---------O2         <---------TOE2(2)   <---------ANAC58 -------ATHB12            --------->O2 <---------ANAC58<---------ANAC58 <---------MYB46(3) ------>ICU4             <-----------STF1     <---------MYB52(1)  <---------LBD16 ------TOE2(3)    ---------->DOF2      <---------ANAC58<---------ANAC58--------->ALFIN1   atgatgggtgttggttctatcaaagaagacgtcaaagcaatgcttctcgttggttttgctggccttgttgcgggtgcttgtagtatggctattggagagt  9176000                     --------->ARR11(3)               ---------->DOF2             --------->MYB46(3)            --------->ANAC58            --------->ANAC58            --------->ANAC46           ------->TEIL         <---------ZAT14             <---------At4g35610         --------->ZAT14             --------->At4g35610         --------->ZAT18        --------->ZAT18                          --------->ANAC46         <---------ZAT18        <---------ZAT14                         --------->YAB1      <------ZmHOX2a(1)       <---------ZAT18          --------->ZAT14          --------->TOE1(2)--------->At4g35610      <-   ttgtgtctgtgtgcacccaaagggatattgaaactgcacagatgaagagagctattgaacataagacatcactatcagcaatcgacgaacaagaggaggt  9176100                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                           <-----------GT1    <------                                                                        <----------TaMYB80   --------                                                                       <---------ARR14(2)    --------                                                                       ------->TEIL         ------>MYB83                            <----------DOF2                            --------->ARR14(2)   ------>MYB46(1)                        --------->ZAT14         --------->AHL20(2)  --------->ANAC55(1)     -------->P   --------->STY1(2)  --------->ANAC46         --------->YAB1       --------->ANAC55(2)   <---------MYB59   <---------STY1(2)--------->ZAT6            --------->AHL20(2)    <---------ANAC55(2)<-----------GT1  ------->TEIL  <---------AHL20(2)          --------->YAB1 --------->TOE2(2)       --------->ICU4---- --------REM1(1)--------->AHL20(2)        --------->AHL20(2)        --------->ANAC46<---------ICU4---   aatgtagctagtgtctaattaaacactaaactttactcacacataaaaataaaaatagaaacctatgtatacgtattttcccatagttattacctacacc  9176200  Previous    Next  AGI:  At3g25190.1    Description:  nodulin, putative. similar to nodulin, putative [Arabidopsis thaliana] (TAIR:AT3G43660.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65436.1); contains InterPro domain Protein of unknown function DUF125, transmembrane (InterPro:IPR008217) Range:  from: 9175694    to: 9177013    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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