Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ANAC58                                                                <-------GAMYB                                                                <---------ANAC58                                                             --------->ATERF1(1)                                                            <---------RAP2.3(1)                                                            <---------ERF1                                                            <---------RRTF1(1)                                                           <---------DEAR3(1)                                                           <---------DREB2C(2)                                                           <---------RAP2.3(2)                                                           <---------RRTF1(2)                                                           <---------RRTF1(3)                                                           <---------At1g77200                                                           <---------DEAR4(1)                                                           <---------RAP2.3(3)                                                           --------->ETT(1)                                                          --------->RAP2.6(3)                                 ----------->RAV1(1)      --------->DDF1                               <------NtERF2             <-----------HVH21                            --------->At4g35610         <-----------RAV1(1)                            <---------At4g35610       --------->YAB1                           --------->LBD16            <---------ICU4              --------->MYB52(1)     --------->GLK1(1)    <---------RAP2.6(2)        --------->ICU4    <---------ARR14(2)       -----     <---------GLK1(1) --------->ARR14(2)          --------->YAB1      --------->ARR14(2)       ----- ---------ZAT18        <---------ARR14(2)      <------NtERF2<---------ORA47(2)  --------->MYB46(3) ---->ATHB12        <---------DAG2           --------->ETT(1)<------NtERF2 ------>ZmHOX2a(1)    ----- ---DOF2  --------->LBD16<---------LBD16     <---------DEAR3(1)------>NtERF2    <---------MYB55(2)   attgcacatttccgagacttcgccttatccggctgcaacatagatggtcggagtaataatgtcggcgcttgtgaatcctccaactactggtggaatgcag  9128100                                 <----------DOF2                                                 ----                        --------->MYB52(1)                                                       ----                      <---------MYB52(2)                                                       <-----               --------->At4g35610                                                 ------>ZmHOX2a(2)    <---------YAB1 <---------ARR14(2)                                              ================== <---------MYB52(2)--------->ARR14(2)     --------->TOE1(2)                    --------->ICU4  <----- ---->ANAC58   <---------At4g35610      ------->TEIL                       <---------ZAT14     <----- ---->ANAC46   <---------LBD16   <---------DAG2          <-------TEIL <---------YAB1  <----------DOF2 ---->ANAC58---------->DOF2  <---------GLK1(2)   <------ZmHOX2a(1) <---------YAB1  ==================   gcaactatcaaagattaagcggaaacgaacagaaactttatgaacatgtgaggagcaagtacatgaactatgactattgtactgatcgctctaagtacca  9128200                                                   --------->ANAC55(2)                                                  <-------TEIL                                                <---------ARR14(2)                                             --------->YAB1      --------->HSFB2a(2)                   <---------YAB1      ------>ZmHOX2a(1)                   --------->YAB1      <---------HSFB2a(2)                 <---------ICU4   ------>ZmHOX2a(1)                 <---------MYB52(1) -->MYB83                            --------->DOF5.7(2) -->MYB46(1)                        --------->TOE1(3) <---------ARR14(2)                          <-- ----MYB59                          --------->TOE2(3) --------->ARR14(2)   <---------DAG2        ---- =========HOX2a_HOX2a              --------->ANAC46<---------ANAC55(2)     <----------DOF2       <--- ----MYB46(2)             <-----------------------TaNAC69(2)      --------->AHL20(2)             ---- ----MYB111(1) <---------YAB1     <-------TEIL  --------->ARR14(2)<---------AHL20(2)   <---------TOE2(3) ============HOX2a_HOX2a  >>>>>>>>>MYB98 --------->ICU4      <---------ARR14(2)  <---------YAB1 -----   aactcctcctagagaatgttattgaagtaacatatatacgttaattatcatatacgtataggggatttttaaatctactttttctaattaagaaacaaaa  9128300      <---------ANAC58      <---------ANAC58                             <------------CBF     <---------At4g35610                         <---------AHL20(2)  <---------At5g28300                            <---------YAB1 <-----------GT1                                --------->AHL20(2)                    <---------At4g35610 -------ICU4                                    --------->AHL20(1)               <---------WOX13(1) - ----->AHL20(1)                          <---------ZAT6                         <------------CBF   -- ------AHL20(2)                          ----------->GT1                       --------->ATHB12    <- ----->AHL20(2)                        ----------->GT1 <---------ANAC46       <---------YAB1     ---- ---->AHL20(2)              <---------ZAT6      <---------AHL20(1)      <-----------TBP  ----------->GT1   aaattactgcttacgagttacaagagaagagagttaagttatagtgaaaatataattgtgtatgctcaaaatgtttttatatgattgcagaagataaata  9128400                                                          <---------HSFC1(2)                                                          --------->HSFB2a(1)                                                          <---------DEAR3(2)                                                          <------MYB83                                                          <------MYB46(1)                                                          <---------HSFB2a(1)                                                         --------->MYB111(1)                                                         --------->MYB59                                                       <---------MYB52(1)                                                      <---------DEAR3(2)                                                    --------->SPL7                                                  <---------SPL7                                                  --------->LBD16                                                  ----------->HVH21                                                 --------->ANAC46                                                <---------LBD16                                              -------->P<--------P                                            <---------SPL7--------->HSFC1(2)                                           <---------ANAC58 -------->CCA1(2)                          <---------DAG2--------->MYB46(2) ------->ARR11(3)      <-----------GT1     <---------ANAC58                                        <- --------ARR11(3)<---------AHL20(2)       ----------------->AGL1                                   -- ------->ARR10----------->GT1            --------->ZAT18<---------MYB55(1)     <------------CBF   ---   agatatgtttcttaactagttaatttttcggttctcgtttaagtgccttacccggacggtaggttccagtttgccaaatcaaattggtttttgaagaagt  9128500                                                                    --------->ANAC46          --------->AHL20(2)                        --------->TOE2(1)    --------->ANAC58 --------At4g35610                                  --------->TOE1(1)    --------->ANAC58 ------->At4g35610                   --------->ARR14(2)       ------>ZmHOX2a(1) ------>MYB59       <---------------AtSPL8<---------AtLEC2  ----------->RAV1(2)   tagctctaagaattaaaacatcatggtacagacaaaacatttctgcatgttacatcggactctcctgtgtccgaaacgcatcaaatttctgcaatccatt  9128600                             --------->ANAC46                           <---------ALFIN1                         --------->CCA1(2)                         <------ZmHOX2a(2)                        --------->ARR11(3)                        --------->ARR14(2)                        <-----------ARR10                        <---------ARR14(2)                --------->ZAT14                                                                   ---              --------->ANAC58           --------->YAB1                             ------>ZmHOX2a(2)              --------->ANAC58  <----------DOF2             --------->MYB52(1)     <------ZmHOX2a(2)              --------->bZIP60(2)        <---------ICU4  --------->ANAC55(2)      <---------ARR11(3)            <---------ALFIN1 --------->ANAC58          <-----------GT1            --------->ARR14(3)           <------NtERF2--------->AGP1  --------->ICU4 <---------AHL20(2)         <---------ARR14(3)          --------->RAP2.6(2)--------->ANAC58   ----------->GT1                   --------->ARR11(3)     ---------->DOF2   --------->At4g35610     <---------ZAT6      --------->At4g35610      <--------   tctaaactcaagcggcacatcactcagatccacgcttttgtaatcagtactggtaatttacttaatggaagctctattagtcgagatctcatcgcttcat  9128700                              --------->DAG2                          --------->ANAC58                --------->ALFIN1                          --------->ANAC46              <---------ANAC58                ------>ZmHOX2a(2)                       <---------ANAC46               <------ZmHOX2a(2)                        <---------ANAC58               <---------GLK1(1)                  <------NtERF2               --------->GLK1(1)                  <-----------RAV1(2)              --------->ARR11(3)                  <----------CDC5     --------->GLK1(2)    --------->ANAC58       <---------At4g35610           <---------ICU4     ------->TEIL         --------->ANAC55(1)    --------->At4g35610           --------->ATHB12     --------->ARR14(2)   <---------ANAC55(2)    ------>NtERF2                <---------YAB1     <---------ARR14(2)  ------->TEIL          <---------RAP2.6(2)            --------->ICU4   <----- ------>ALFIN1<---------ARR11(3) --------->ALFIN1--------->LBD16       <---------ICU4     --------->KAN4(2) --DOF2  <-----------HVH21--------->ANAC55(2)  <---------LBD16        <---------YAB1<---------TOE2(3)   gtggacgaatcggtgagatctcttatgcacgtaaggtgttcgacgaattgccgcagaggggtgtttctgtttataattccatgattgtggtttattctcg  9128800                          <----------DOF2  --------->At4g35610                          <---------DAG2   <---------At4g35610                   --------->YAB1  <---                 <---------ARR14(2)   <---------YAB1                      <-------TEIL       <-------                 --------->ARR14(2) <---------At4g35610                   --------->ZAT18    --------          <---------At4g35610       --------->At4g35610                  --------->DOF5.7(2)<--------          --------->At4g35610     <-----------RAV1(2)                   --------->TOE1(3)   <--------        <-----------RAV1(2)   <---------YAB1                     --------->At4g35610    ---------->DOF2 ----ANAC46   <---------TOE2(3)--------->YAB1                    <---------At4g35610  <------ZmHOX2a(2)   tggaaaaaatccagatgaggttttgcgactttatgatcagatgatagctgaaaaaattcaaccagatagctcaacgttcactatgacgatcaaagcgtgc  9128900                                             --------->At4g35610                                       ---------->DOF2                                    <---------ZAT6       <---------AtMYB61            <---------ANAC46       --------->MYB59            <---------ANAC46     <---------ANAC46             ----------->GT1            <---------AHL20(2)   <---------MYB46(3)            --------->ALFIN1           --------->YAB1 -------DOF2                    <---------ZAT14        <---------ANAC46                       ------- --ZAT18                        --------->ZAT14<---------ZAT14                      <---------At4g35610 ->ZAT18          ---------->DOF2<---------AtMYB61 <----------DOF2      <----------DOF2  <---------ANAC46 -ANAC58<------MYB83           <---------ANAC46--------->ZAT14 --------->YAB1       --------->At4g35610 -ANAC58<------MYB46(1)        --------->ALFIN1<---------ZAT18 <---------ICU4 <---------MYB46(3)   ttaagtggtttggttttagagaaaggagaggctgtgtggtgtaaagcagtggactttgggtataaaaatgatgtctttgtttgttcatctgtcttgaatc  9129000  Previous    Next  AGI:  At3g25050.1    Description:  XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3); hydrolase, acting on glycosyl bonds. Identical to Xyloglucan endotransglucosylase/hydrolase protein 3 precursor (XTH3) [Arabidopsis Thaliana] (GB:Q9LJR7;GB:Q1PEM0); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT4G13090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38697.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23048.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPr Range:  from: 9126858    to: 9128423    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g25060.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G12770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17278.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 9128523    to: 9130328    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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