Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ATHB12                                           <---------ATHB12          --------->WOX13(1)                                           <---------YAB1          <---------At4g35610                                        <---------ATHB12           <------NtERF2                                     --------->ZAT6   <---------GLK1(1)                                   -------->P         --------->GLK1(1)                                  <-----------GT1<---------TOE2(3) --------->At4g35610                          --------->ARR11(3)<--------HAHB4    --------->MYB46(2)                          <---------ARR11(3)<---------ICU4    --------->MYB59                     --- <---------ARR11(3)       <-----------ARR10--------->ICU4   <---------MYB52(1)                    --- --------->ARR11(3)   --------->HSFB2a(2)--------->YAB1    <-------GAMYB               <------ZmHOX2a(1)   atagatattgtatagcttaagcttctaaaatcttatctaccactcatcattaagggatttcggttaggcagcaatctagagaagttttaggagcaaaaaa  9126500                                                                 --------->DOF5.7(2)                                                                --------->TOE2(3)   <---------ZAT18             <---------MYB46(3)                               <---------TOE2(3)  <-------GAMYB        <---------TOE2(3)                    <---------------AtSPL3             <---------ANAC58       <-----------GT1                       <---------------AtSPL8   --------->TOE2(3)      <-----------GT1                    --------->WOX13(1)   <---------TOE1(3) <---------ANAC58     <---------AHL20(2)          --------->ARR11(3)       --------->TOE1(3)     --------->MYB52(2) ------>TOE2(3)                  <---------ARR11(3)       --------->YAB1 --------->WOX13(1)         - ------>TOE1(3)                  --------->GLK1(2)        --------->TOE2(3)<---------ATHB12<---------ARR11(3)   cctgaattttaacatttgttactagtaacaacaaaaatcttgtcaatcttgtacgattaatcttaacgtttacatcaatctttcgttgcactagttctta  9126600                      <---------ARR11(3)                      --------->ARR11(3)                    <---------YAB1                                              ----------->GT1                  --------->YAB1                                              ----------->GT1                 <---------ATHB12                                   ------>ZmHOX2a(1)              --------->AHL20(2)                                    --------->LBD16 --------->YAB1              <---------AHL20(2)        <---------HSFB2a(2)        --------------->AGL15           <-             --------->AHL20(2)      <---------YAB1      ==================HOX2a_HOX2a             --        <------ZmHOX2a(2)         <---------YAB1   --------->MYB52(1)   ---------->DOF2            -- --------->DOF2--------->WOX13(1) <---------AHL20(2)     <------ZmHOX2a(2)  ---------->DOF2       ---   ccaaaagtcgatcaaattaatcaagataattctcatattattgtagaagagactaatggatcacaacatcctgaaaaagaaagtgataatatttgataaa  9126700               <----------CDC5              --------->At4g35610         --------->ALFIN1                                      <----              <---------At4g35610       <---------ANAC46                                        <----       <---------ICU4                   <---------bZIP60(2)                                     -----      <---------YAB1                    <---------ANAC58                                        <----     <---------TOE2(3)                  <---------ANAC55(1)                                     ----- --------AHL20(2)                  <---------ICU4                                              <----- ------->AHL20(2)               --------->YAB1 <------ZmHOX2a(1)                           ------>ZmHOX2a(1) ------->AHL20(1)            --------->YAB1--------->REM1(2)         ----------->HVH21---------->ID1 ------>AHL20(2)         ----------->GT1<---------ANAC58     --------->GLK1(2)    <----------DOF2  <-   aaaaattgatgatggccgatgagcatggggataataagaatggcgtgtaggagatgtatagagaatttgatgtgactctaatctctttgtctcctccata  9126800           <-----------GT1       <----------DOF2                                                                            <-- -----ARR14(2)                                                                               <------- -----ARR11(1)                                  <-----------GT1                           --------->ARR14(2) ---->ARR14(2)                              <---------ZAT14                               <---------ARR14(2) -----ARR11(3)                          --------->ZAT6                 ---------->DOF2    --------->GLK1(2) ---->ARR11(3)       <-----------GT1  ----------->RAV1(1) *TSS   <---------AHL20(2)       <---------ARR11(3) ----CCA1(2)  <----------DOF2       <---------ZAT18<---------MYB59<---------AHL20(2)      --------->ARR11(3) ---------DOF2<---------DAG2 <-----------GT1--------->ZAT14      --------->AHL20(2)      <---------GLK1(2)   tctttcatgctttctactttttttaactattaaaccagtgcaacactatagtaccttacaacaaaaattaaatcaaagatggactatatgagaatcttta  9126900                                                                                                   ==                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                          <---------AHL20(2)                                                                                          <---------AHL20(1)                                                          <---------ARR14(2)              --------->AHL20(1)                                                         <------ZmHOX2a(1)               --------->AHL20(2)                      --------->YAB1                 <---------TOE1(1)           <-----------HVH21 <-                     =====================================HOX2a_HOX2a       =========================           <---------TOE2(3)   <---------MYB46(3)    <---------TOE2(1)   <-----------GT1 --------->YAB1 -------ZAT6         <------ZmHOX2a(2)             <------ZmHOX2a(1)  ----------->GT1--------->ICU4<- ---DOF2  <-----------GT1     <--------P     <---------LBD16 ----------->GT1<----------DOF2        <-   gtgtttttgtagtaacgttatggatcataagggttgatgctagggttttcggaggacgaggaatcgaaaaatttgtaactttcggtcagaattatattgt  9127000        ---------->DOF2    <---------PCF2    <----------ID1 --------->ALFIN1 ==================bZIP_DOF --------bZIP60(2) --------ANAC55(1) --------ANAC46 ------->ANAC55(2)       --------->ANAC58 ------->O2              --------->ANAC58                     --------->WOX13(1) --------TGA1a           --------->ANAC46                   <------ZmHOX2a(2) --------O2            <---------ALFIN1           <----------DOF2 ------->TGA1a        <---------ZAT14            ------>ZmHOX2a(2) --------ANAC55(2)    --------->ZAT14            <---------ICU4           ----------->GT1 ========bZIP_DOF    <-----------GT1           --------->ARR11(3)   <-----------RAV1(2) --------ANAC58--------->ICU4                  <---------ARR11(3)--------->YAB1   <----------DOF2 --------ANAC58<---------YAB1       <---------ANAC46  <---------AtLEC2   <-------TEIL   <<<<<<<<<<GT-3b   tacgtggggacaaagtcatgtttctacactccattctggcgaagaagttgatctttacatggatcaatcttcaggttcgtaactctttatttttcttaca  9127100                                                                                           <------ZmHOX2a(2)                                                                        --------->ARR14(2)<---------ARR14(2)                                                                  <---------PCF2          <----------                                                                 <------MYB83          --------->ANAC46                                                                 <------MYB46(1)      <---------LBD16                                                                 <---------DEAR3(2) --------->DEAR3(1)                                                                <---------MYB46(3)------>NtERF2                                                               <---------ANAC46   <---------ATERF1(1)                                                             <---------MYB46(3)  --------->ANAC58                                           <---------ANAC58 <---------DEAR3(1)   --------->ANAC58                            ------>ZmHOX2a(1)               <---------AtMYB61  <------ZmHOX2a(1)        <----------ID1     --------->TOE2(3)            <-----------RAV1(2)--------->TOE1(2)        <      ---------->DOF2      --------->TOE1(3)       --------->ANAC46     <---------ARR14(2)--------->ARR14(2)      <xxxxxxxxxxxxxxxxsmallRNA(s)         <---------ANAC58 --------->ALFIN1   ===================HOX2a_HOX2a   taaaaacaaaaagacaaaatttgtataatccttaattagagtttggcttctacatgaaacaggtggtgggttcgaatccaaggacgcctacggatcaggt  9127200                                             <-----------TGA1                                            --------->bZIP60(2)                                        <------NtERF2<----------DOF2                                        --------->ATERF1(1)                                       ------>NtERF2 <---------DAG2                                       <---------RAP2.3(1)                                      <---------RAP2.6(2)                                      --------->ATERF1(2)                           --------->LBD16 <------NtERF2   <---------ANAC58              --------->YAB1<------ZmHOX2a(1)<-----------HVH21            --------->GLK1(2)         <---------RAP2.3(3)  <---------ANAC58 -HVH21 --------->YAB1<----------DOF2 <---------ATERF1(2) <---------TOE2(3)     <-------TEIL ----------DOF2---------->DOF2       --------->RAP2.6(3) <-----------GT1   --------->AHL20(2)   ctctttgaaatgagaatcaaagtgccttcaggaaatactggcggcatcgtcaccgctttttacgtttgtattcttgattatatacatttatacctagact  9127300                                                  --------->O2                                                  <---------ANAC46                                                <---------DOF5.7(2)                                               --------->WRKY12                                               ----------->HVH21                                             --------->At4g35610                                         --------->YAB1                                         <-----------GT1         <-----------HVH21                                      --------->YAB1            <---------MYB46(3)                                     <---------AHL20(2)        --------->ALFIN1                                     --------->AHL20(2)     --------->ALFIN1                                    --------->ICU4<---------O2 <---------AtMYB61             <-------                                 <---------AHL20(2)    ---------->DOF2                   --------->GLK1(2)              --------->YAB1   --------->ANAC55(2)<---------bZIP60(2)        <---------WOX13(1)   aattcaaaactcatattgataagttgtctatatatgtaattaataacagttgacgtcgaaaggaggtggtcacgacgagattgacttcgagtttctaggg  9127400  Previous    Next  AGI:  At3g25050.1    Description:  XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3); hydrolase, acting on glycosyl bonds. Identical to Xyloglucan endotransglucosylase/hydrolase protein 3 precursor (XTH3) [Arabidopsis Thaliana] (GB:Q9LJR7;GB:Q1PEM0); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT4G13090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38697.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23048.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPr Range:  from: 9126858    to: 9128423    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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