Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------TOE1(3)           <---------TOE2(3)  --------->ANAC58  xxxxxxxxxxxxxxx>smallRNA(fl3)                                                           <----------  --------->ANAC58                           --------->ANAC58                            ------------ --------->DOF2            --------->DAG2    --------->ANAC58                            <----------- -----NtERF2              ---------->DOF2  <------ZmHOX2a(1)                    <xxxxxxxxxxxxxxxxxxxx -----LBD16<---------TOE2(2)   --------->ARR11(3)        ---------->DOF2      <---------MYB46(3)   cggaaagcatgcttaggttactaaatgaaaaaggaacttgggcgaggaagccactacttgaaagagacaatacctctaagttgttgagcattccaaactt  9108500                                                                                             <-------                                                                                         --------->ARR14(2)                                                                               <------MYB46(1)                                                                               <------MYB83  --------  --------->ARR11(3)                                      ------->TEIL        --------->MYB59-------- -----AGL15    --------->At4g35610                     <---------YAB1       <---------MYB52(1)   ---- ----->AGL1   --------->ALFIN1                      --------->ICU4 --------->DAG2        <---------ARR14(2) ------AGL1  <------ZmHOX2a(1)                    <---------At4g35610     <---------ZAT6<---------GLK1(1) xxxsmallRNA(si3)           <---------YAB1  --------->MYB52(1)   ---------->DOF2        --------->GLK1(1)   ggaagaaattgaagaggaggtgaagttgttatgagggagaagaagggaacggagatgatgaaactggaaaaggctactgttaggtttcagagttccgcta  9108600                                                    --------->ANAC46                                                 --------->ZAT14                                                 <---------ZAT14                                                 <---------ZAT18                                                <---------ALFIN1                                               --------->ANAC58                                               --------->ANAC46                                               --------->ANAC58                                   --------->REM1(2)--------->ANAC58                                   --------->ZAT14  --------->ANAC58  --------->ANAC58                --------->ALFIN1<---------ALFIN1  --------->ANAC58          <---------ALFIN1 XXXXXXXXXXXXXXXXXXXX>MIR166A-G     --------->ANAC58 --At4g35610               <---------ZAT18--------->At4g35610                   --------->ANAC58 ->At4g35610               --------->ZAT18<---------At4g35610            <---------MYB46(3) ->LBD16    <---------REM1(1)    --------->LBD16--------->AtMYB61       <---------YAB1 ------->ARR10        ----------->HVH21 <---------WRKY38(1)             <---------TOE2(3)   agacatgccctgagttgtagcatcgtgaccgcacccgtggagtcatcgcaccacactccattccaagggtcactatggttgcaagcacgagtatcaaact  9108700                                 <---------TCP16(1)                                 <---------PCF5                                 --------->PCF2                                <---------PCF2                               <------NtERF2           ----------->RAV1(1)                              <---------MYB46(3)      --------->MYB46(3)                             --------->ALFIN1        ------>MYB46(1)                       ------->TEIL     --------->ANAC46                       <---------ARR14(2)            ------>MYB83                       --------->ARR14(2)--------->MYB46(3)        <---------AHL20(2)                  <---------ANAC58      --------->ANAC58         <---------YAB1                  <---------ANAC58      --------->ANAC58    ----------->GT1             ---------->DOF2 <---------ANAC46       ----------->RAV1(1)                            <-          <---------ANAC46<-----------RAV1(1)      --------->AtMYB61---------->DOF2    <------ZmHOX2a(1)   cgttcttgaactgcgtaaaggcttgaatctggtggggaccacaagcaccaagaccaacaacagggttattaaaagtgaagaagcttgaaggagagacaca  9108800                                  --------->ANAC58          <----------DOF2                                  --------->ANAC58<---------YAB1    ---------->DOF2 --------ARR11(3)               ---------->DOF2--------->ICU4   ---------->DOF2  <---------YAB1   agatagtaagagtagcaagagaaaattcaaactgaaaagcaattcagacatgatgaaaacagctttgaaagaaagaatggattttgatataagaaatgtg  9108900                                                                         <------------CBF                                                                        --------->ATHB12                    <---------YAB1                                     <---------YAB1                  ---------->DOF2                                     <-----------TGA1              <         <------MYB46(1)                                            <-----------STF1          -------         <------MYB83                                           --------->ZAT14               <------         ----------->GT1                                 --------->At4g35610                 --------     --------->ATHB12                 <---------AtLEC2   <---------At4g35610               <---------MYB52(1)   agagagaagattggtataaataaagatagaatgtggttttgcatagtggaagcagtgagagctaagtgaagtcgtcattgaagtgaaatcgacgttagat  9109000                                                                           <---------ICU4       <---------TOE2(3)                    --------->AHL20(2)             --------->YAB1 ----------DOF2                     <----------DOF2                       --------->ICU4 -->At4g35610                 --------->bZIP60(1)                       --------->YAB1 <------------CBF ---At4g35610                 <---------bZIP60(1)    <---------YAB1  --------->YAB1  --------->ARR11(3) ->MYB52(2)------->TEIL       --------->ANAC46<-----------GT1  --------->YAB1    ----------->GT1-----   gacttttctaatgtatattttggactggaatcacatcactttgaaattatacattatgttcaaaatcacaagaagaataatgagggtgatattgacccca  9109100                                                                                           <---------At4g35610                                                                                           --------->At4g35610                                                                                          <----------                                        ------>MYB83                                   ------>MYB83                                        -------->P                                   --------->AtMYB61                                        ------>MYB46(1)                              <---------MYB46(2)                                    <------ZmHOX2a(2)                                <---------MYB111(2)                                   --------->ARR14(2)                               --------->ANAC58                                   --------->ARR14(3)                               --------->ANAC58         --------->ANAC58          <---------ARR14(2)                               --------->ANAC46         --------->ANAC46          <---------ARR14(3)                             --------->ANAC46         --------->ANAC58          --------->ARR11(3)                             --------->ANAC58     <-----------GT1 <------------CBF------>ZmHOX2a(2)                            --------->ANAC58 <- <-------MYC3 ------>MYB83         <---------ARR11(3)                     ------->MYC3 ------>MYB46(1) ------->MYC3 ------>MYB46(1)    ----------->ARR10    <---------At4g35610 <-------MYC3 --------->MYB52(1) ------>RAV1(1) <-----------------AGL3 ------>ZmHOX2a(1)    <------------CBF  <-----------GT1   -----   acatgtgttacacaccaagcttatattggtgagtcaagatcctaccacaaatgtccaactgatattgacccctacatgtgttacacaccaaactgctgca  9109200                                            --------->ANAC55(2)                                            --------->TGA1a                                            <---------O2                                            --------->O2                                            <---------TGA1a                                            --------->bZIP60(1)                                            <---------bZIP60(2)                                            <---------bZIP60(1)                                            <---------ANAC58                                            <---------ANAC55(1)                                            <---------ANAC55(2)                                            <---------ANAC46                                    =====================HOX2a_HOX2a                                  --------->ARR11(3)                   --------->HSFB2a(1)      =======================bZIP_DOF                   <---------HSFC1(2)<----------DOF2                   --------->HSFC1(2)=================bZIP_DOF                   <---------HSFB2a(1)      <---------ANAC58                  --------->ARR14(2)------>ZmHOX2a(2)                  <---------KAN4(2)<------ZmHOX2a(2)                  --------->GLK1(2)======================HOX2a_HOX2a                ===========================HOX2a_HOX2a         ------->GAMYB            --------->ARR14(3)        --------->ANAC58          <---------ARR14(2)        --------->ANAC58          <---------ARR14(3)       <-----------------AGL1     <---------ARR11(3)      <---------DOF5.7(2)       ----------->ARR10 <------ZmHOX2a(1)      --------->MYB52(1)   <---------MYB46(3) --------->ALFIN1                                  -----     ----------->HVH21    <---------TOE1(2)----------->STF1                                    <-----    <---------MYB52(2)    <---------TOE2(2)<-----------------------TaNAC69(2)                --------   --------->At4g35610  <---------ANAC58 ----------->HVH21                     --------->AHL20(2) <--   <---------At4g35610  <---------ANAC58 ----------->TGA1               --------->ANAC46     <-------   --------->ZAT2<---------GLK1(2)--------->AGP1 ----------->GT1        <----------ID1       -------- -RAV1(1)=============================================MYC_MYB           --------->ANAC58     <------- ----------HVH21==========================HOX2a_HOX2a                 --------->MYB52(1)     -------- ------>RAV1(1) <------ZmHOX2a(1) --------->ARR14(2)    ---------->DOF2 --------->ANAC58    ---------   ccatcagctaacggaataggaatcttccttggttaagatctttgtgacgtgaggaaataaaagttttgaaaataacgccaaaaaaataggctgaattatt  9109300                                                             --------->ANAC58                                                             --------->ANAC58                                                          <---------ZAT2                                                          --------->ZAT2                  -----------                                                          <---------STY1(2)     --------->MYB52(1) ---->AHL20(2)                                            --------->STY1(2)  --------->ANAC55(2) ----YAB1                                                --------->ANAC58    --------->ANAC55(1) ->YAB1                                                  --------->ANAC58    --------->ANAC58 -------YAB1                 --------->TOE2(2)       --------->ANAC58        <---------ANAC55(2) --ICU4            ----------->GT1                   --------->ANAC58        --------->ANAC58 >ATHB1       --------->YAB1 <---------MYB59       ---------->DOF2           --------->ANAC46 -HAHB4      <---------ATHB12--------->TOE1(2)   --------->ANAC58           --------------->AGL15 ->ATHB51    <<<<<<<<<ARR2   --------->TOE2(3)   --------->ANAC46          <-----------------AGL1 >ICU4  --------->YAB1    <-----------GT1        --------->ANAC58        <-----------GT1 --------->CCA1(2)   atttatgaaatcacaatcaaaatgttatttacctaagaaacaaaactggacacgaaagcaagctagcaaagttttttacacgtaatggaagatagaaaaa  9109400  Previous    Next  AGI:  At3g24982.1    Description:  protein binding. similar to disease resistance family protein / LRR family protein [Arabidopsis thaliana] (TAIR:AT3G24900.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G25020.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G25010.1); similar to putative LRR family protein [Brassica napus] (GB:ABI99471.1); similar to putative disease resistance/LRR family protein [Brassica napus] (GB:ABR92699.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype (InterPro:IPR003591) Range:  from: 9106007    to: 9108944    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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