Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------LBD16                             <---------ANAC55(2)                             <---------ANAC58                             <---------ANAC46                             <---------ANAC58                          <---------YAB1                             ----------->GT1                           <-----------RAV1(1)                             --------->ANAC55(2)               <---------At4g35610          ---------  <---------YAB1         <---------ANAC58                      --------->At4g35610          --------- ---------ICU4           <---------ANAC58                      <---------ZAT2       --------->DAG2 ------->ICU4           --------->ZAT2                       <---------ZAT18       ---------->DOF2 --------YAB1           <---------At4g35610                  --------->ZAT14   <------ZmHOX2a(1) ---->GT1               --------->At4g35610            -------->P   <---------MYB52(1)<---------LBD16 ->DAG2                 <---------ZAT2 --------->LBD16 --------->MYB52(1) --------->ALFIN1  xxxxxxxxx ->DOF2               <---------ZAT18<-----------------------TaNAC69(2)<---------AtMYB61  ---------->DOF2   gattatgagaaacatctaaaattgtgagcttgcgtaaattccgcacaaacgataaactaccagtgagctcgttatggtggaggagtaaagcggaaagcat  9101400                <------ZmHOX2a(1)          ---------->DOF2       ----------------->AGL3       <-----------------AGL3 <---------TOE1(3) <---------TOE2(3)                     ----------->RAV1(1) <---------TOE2(2)                 --------->ANAC58 >ANAC58<---------------AGL15      --------->ANAC58 >ANAC58--------------->AGL15    <------ZmHOX2a(1)                                   <---------LBD16 xxxxxx>smallRNA(fl3)--------->ARR11(3)------>NtERF2        --------->TOE2(3)  ----------------->AGL1   gcttaggttactaaaagaggaaggaacttggcctaggaagccaccagtagacataaacaaaacctctaatttgttgagcattccaaactcggaagggatt  9101500                                        <---------ZAT2                                        <---------At4g35610                                        --------->At4g35610                                       ------->TEIL                                 ----------->HVH21                              <---------TOE2(3)                              <---------ZAT6             <---------MYB46(3)  ----------->TGA1                     --------->ARR11(3)    --------->ALFIN1         --------->DAG2                           <---------ARR11(3)        <----    <---------DEAR3(1)      ---------->DOF2--------->At4g35610    <---------MYB52(1)        --------- --------->ALFIN1          --------->CCA1(2)    ------->TEIL    <---------ZAT6              ---------   gaagagggggtgaagttgttgtaagagagataaaggtgacgaagctgatgaaactggaagaggctactgttagattttagagttccactgagacaggccc  9101600                                          --------->ANAC46                        --------->ALFIN1  --------->ANAC58                       --------->LBD16    --------->ANAC58                    <------NtERF2       <---------ALFIN1                   ------>NtERF2        --------->ANAC46                --------->YAB1                <---------ATERF1(1)   --------->AtMYB61               --------->ANAC58     <---------TOE1(2) <-------PIF5   <---------ALFIN1                --------->ANAC58 ------CDC5  <---------WRKY18(1)     --------->ANAC58          <---------MYB46(3) >ANAC58    ----------->HVH21        --------->ANAC46         <---------TOE2(3) >ANAC58 <-------TEIL  ------->PIF5  --------->ANAC58         <---------YAB1                        <   tgagtcgtagcttcatgaccgcgcccgtggagttatcgcaccacaccccattcaaggagtcactatggttgcaagcatgagtatcaaactcgtttttgaa  9101700                       <---------PCF5           ------->GAMYB                       --------->PCF2        ------->GAMYB                       <---------TCP16(1)    --------->MYB55(1)                      <---------PCF2        <---------MYB55(2)                     <------NtERF2          --------->MYB46(3)                    <---------MYB46(3)      <---------MYB111(2)                   --------->ALFIN1         <---------MYB52(2)             ------->TEIL     --------->ANAC58 <---------LBD16             <---------ARR14(2)            ------>MYB83             --------->ARR14(2)--------->MYB46(3)--------->LBD16        <---------ANAC58      --------->ANAC46--------->MYB52(1)        <---------ANAC58      --------->ANAC58-------->P   ---------->DOF2 <---------ANAC46        ------>MYB46(1) ---------ANAC46<-----------RAV1(1)      --------->AtMYB61---------->DOF2   ctgcgtaaaggcttgaatctggtggggaccacaagcaccaagaccaacaaccgggtcattaaaagagaagaagcttgaagccaaggagacacaagagagt  9101800                           --------->ANAC58                           --------->ANAC58                          --------->DAG2                         ---------->DOF2                     --------->ANAC58                <----------DOF2                     --------->ANAC58      <---------YAB1                                          <-                   --------->MYB52(1)   --------->ICU4       ---------->DOF2                      ---   aagagtagcaagagaaaattcaaacggaaaagcaattcagacatgatgaaaacagctttgtaagaaagaaaggtttttgatataagaaatgtgagagaga  9101900             <---------YAB1           ---------->DOF2      ----------->TBP                                                                              --  ----------->GT1                                                                              <-----  <------MYB83                                                                                 <-----  <------MYB46(1)              <---------AtLEC2    <---------ANAC46       --------->ZAT14      <----- -----------CBF    <------ZmHOX2a(1)          <------------CBF       <--------P            <---------LBD16 ------>ATHB12  --------->CCA1(2)   --------->ALFIN1              <---------ZAT6   <----------DOF2 <-   agattggtataaataaagataggaagtagttttgcatagtggagcacaaattgacttggaagaagttagaggtaagtgaagtcgtctttgtattcgggct  9102000                <---------MYB52(1)              --------->O2              --------->bZIP60(2)                                    --------->ARR11(3)      --------->ZAT14                                            ---------->DOF2 ------->HSFB2a(2)                                     --------->bZIP60(2)                          - ----ANAC46   --------->ANAC58                         --------->ANAC46                             - ----ANAC58   --------->ANAC58               <------------CBF<----------DOF2                        < ----ANAC58   --------->ANAC46       <---------YAB1  <---------ALFIN1<---------ARR11(3)             < --------HSFB2a(2)                 --------->YAB1   --------->MYB46(3)                       <-------   tggagaagtgaagtccacgttagataatttttcttaagtataatttggattggaaccacatcactttgaaagttctcatatatatgttcaaaatcacata  9102100                                                                    <----------DOF2                                                                ------->PIF5                                                                <-------PIF5                                                               <---------ANAC58                                                               =================================MYC_MYB                                                               <---------ANAC46                                                               --------->O2                                                               ================bZIP_DOF              <------ZmHOX2a(1)                                <---------ANAC58        --------->YAB1                  <------------CBF       <---------TGA1a --------->AHL20(2)                   <---------YAB1           --------->TGA1a <---------AHL20(2)           <-------TEIL                     <---------O2             <-------GAMYB -------->AHL20(1)          <---------ARR14(2)               <---------ALFIN1          <---------ANAC46 -------->AHL20(2)     <------------CBF<---------ICU4<---------ANAC58                  <---------ANAC58 ---------AHL20(2)   --------->ARR11(3)--------->ATHB12     ----------->HVH21 >>>>>>>>>TBF1     ----- ---------AHL20(1)  --------->YAB1    --------->ICU4 <---------ANAC46   <---------TOE2(3)      <----- --ANAC55(2) <----------ID1 --------->ARR14(2)       <---------ANAC58 ----------->HVH21<---------ANAC58   aataaaattagcataaggacaaacatattggatacgtttgattattggagacatttcgtagcccgacgtgctttgacgaagaagaattggcgttgttttg  9102200                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                     --------->At4g35610                                 ----------->GT1        <-----------HVH21 <---------YAB1--------->MYB52(1) ---->ATHB12                <------MYB46(1)       ---------->DOF2       <---------At4g35610 --------- ----YAB1                   <------MYB83    ---------->DOF2 <---------At4g35610      <---------At4g35610   atttgtttgtcgagtatcaaatttcgaagttggtatggtaacgaggcaaagtgaaagtggtcagataatggggaagatgatagttttagctaacaaaaga  9102300  Previous    Next  AGI:  At3g24900.1    Description:  disease resistance family protein / LRR family protein. similar to protein binding [Arabidopsis thaliana] (TAIR:AT3G24982.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G25020.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G25010.1); similar to putative LRR family protein [Brassica napus] (GB:ABI99471.1); similar to putative disease resistance/LRR family protein [Brassica napus] (GB:ABR92699.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype (InterPro:IPR003591) Range:  from: 9099190    to: 9101844    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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