Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ------->TEIL                                          --------->HSFB2a(1)                                         ------->TEIL                                --------->AtMYB61                                --------->MYB46(3)                                <---------MYB46(2)                                <---------MYB111(1) --->YAB1                      --------->ANAC58 ----ICU4                      --------->ANAC46                            ------>ZmHOX2a(2) --->ATHB12                    --------->ANAC58                          <---------ARR14(2) -->HAHB4                    --------->REM1(1)                           --------->ARR14(2)     ----- -->ICU4            --------->ALFIN1  --------->ANAC58               <---------At4g35610        ----- ---YAB1          <-----------RAV1(1) --------->ANAC58            <---------ANAC58              ----- -ICU4           <---------TOE2(3)------>MYB46(1)                 <---------ANAC58   <---------REM1(1) >YAB1         <---------AHL20(2) ------>MYB83                   --------->ZAT2      <---------ANAC46   tgagttattccatgaaattaatgtgggaactacaccaaacacgaatgtacctgtttacaaaatgctctgcttgctgatctgtgagtgatgtagattggac  9095100                                                                                   <---------ARR11(3)                                                                                   --------->ARR11(3)                                                  <---------At4g35610        --------->YAB1                          <---------GLK1(1)    ---------->DOF2              <---------YAB1                          --------->GLK1(1)   ----------->HVH21             --------->ICU4                   ------>MYB83           --------->ZAT18            <---------ANAC58 ---->ANAC58       ------>MYB46(1)        ------>NtERF2--------->CCA1(2)  --------->YAB1           -- ---->ANAC46     <---------MYB59         --------->DEAR3(1)          <---------ANAC58              -- ---->ANAC58     <---------MYB46(2)    <---------At5g28300      ---------->DOF2 <---------ICU4     --   gctatgtgaagttgcaataccaaacttgaaatccaagggattaccgccctgaagcagatagaagagtaaaggcttgtcatcataagttcttacacacaca  9095200          --------->YAB1                    <---------HSFB2a(2)          --------->AHL20(2)                --------->HSFB2a(2)         <---------YAB1                     <---------HSFC1(1)                ------->TEIL         <---------ATHB51                   --------->HSFC1(1)             --------->ANAC58 --------->ANAC46                --------->YAB1                            --------->ANAC58    <----- ------->ANAC58            --------->ANAC55(2)                          ------>ZmHOX2a(1)   <-------- ------->ANAC58            <---------ANAC55(2) <---------GLK1(2)   <----------DOF2          <-------- ------->ANAC46    ----------->GT1    <----------DOF2           ------>ZmHOX2a(1)           <--------   cacacaaaacaattatagaacagggaaataggtattcatactttctctagaaactccaattctctcctcctttcctcacgaacatcatactcttgcctgt  9095300                                                                            --------->ARR11(3)                                                                        <---------At4g35610    --------->ANAC58                                                 <---------ZAT14    --------->ANAC58                                                 --------->ZAT14 --GAMYB                             --------->At4g35610           --------->ANAC46 -ANAC58                             <---------At4g35610    <-----------GT1 <---------ARR11(3) -ANAC58       <-----------GT1    ---------->DOF2          --------->AHL20(2)     <---------ARR11(3) -ANAC46  <----------DOF2    --------->YAB1                <---------AHL20(2)<------ZmHOX2a(2)   tgaaataagcatctttgttacacattggaaataatagaaagctgtagaaattatagagcatttaaacacactgcagaagatcaagatgtctcaatctgaa  9095400                                            <---------ARR11(3)                                            --------->ARR11(3)                                         <------NtERF2                                        --------->LBD16                                       <------NtERF2                                      ------>NtERF2                                      <---------LBD16     --------->At4g35610             <---------ANAC46     --------->ZAT2                  --------->DEAR3(1)                                            --     <---------At4g35610           <---------RAP2.3(1)           --------->AtMYB61                 --     <---------ZAT2               <---------DEAR3(1)          <---------ALFIN1                     --    ----------->ARR10            --------->SPL7         --------->AtMYB61                        ---- --------->TOE1(3)              <---------MYB52(1)   --------->ZAT6                              ---- --------->TOE2(3)  <XXXXXXXXXXXXXXXXXXXXMIR780.1  <-----------GT1                  ------>ZmHOX2a(1)   ataccttagctccgcttgagccttctcaatagctgttcggcgcggagatgttttaacaccaataccacctccactatcgataactcctcccatggaatca  9095500                            --------->ANAC58                            --------->ANAC58                       --------->LBD16                       ------>ZmHOX2a(1)                     ----------->RAV1(2)                   --------->ARR11(3)                  --------->ANAC46                  --------->GLK1(1)                 <---------ARR14(2)                  <---------GLK1(1)           <---------O2                  --------->RVE1(1)           --------->TGA1a                 --------->ARR11(3)           --------->O2  ------------>CBF ------->TOE2(3) <---------ARR14(2)           <---------TGA1a ------->TOE1(3) --------->ARR14(2)           --------->ANAC46 ------->AtMYB61 <---------ARR11(3)           --------->bZIP60(2)                                  <- --->TEIL  <---------HSFB2a(2)              <---------ALFIN1<---------ATHB12              --------->AHL20(2) ---->P    --------->HSFB2a(2)      --------->AtLEC2--------->ARR14(2)         --------->MYB52(1)  --   acctcagcatttactagaagatatcctgaaacgcttccatgcatcaccacgtcgaataccccatcaattcgaattctagcttaactgaaaaattatatca  9095600                                    --------->ZAT14                              --------->YAB1                                      --------->ZAT6                             <---------YAB1                                ----------->TBP             <---------At5g28300    <---------ZAT14             <-----------RAV1(1)            <-----------GT1 --------->ARR11(3)             --------->TOE2(3)    <<<<<<<<<<<<<<<<<LFY  <----------DOF2           <---------ARR11(3)            --------->ANAC46------>MYB83----------->GT1 --------ARR11(3)          --------->YAB1               --------->REM1(1) ------>MYB46(1) ------->ARR11(3)        <---------KAN4(2)      --------->GLK1(2)       <---------MYB59         -----   agagctttcagtatttacagcattccgaatgatcatactgcagaagttagaatcagttacacctaaatgttggacctacaaataacactggtaaaatgta  9095700                                                                                --------->ARR11(3)                                     <---------AHL20(2)                     <---------At4g35610                                     <---------YAB1                       <-----------RAV1(2)              --------->DAG2        --------->AHL20(2)         <---------ARR11(3)       ----------->GT1     <---------YAB1           <---------bZIP60(1)         <-------TEIL --------->At4g35610     --------->ICU4        <---------YAB1       <---------ANAC58   ------->TEIL <---------ARR11(3)   --------->YAB1--------------->AtSPL3         <---------ANAC58<---------REM1(1)----------->GT1 -->TEIL     ---------->DOF2  --------->bZIP60(1)    --------->YAB1<-----------GT1    ---------->DOF2   tgttctcatgatgcaaaaagcagtaccatatgatatcatataatagagtagcttatcagattcaagatgtaactgctcagaagatgtcaaaagtaaaaca  9095800                                                                                              -------                                                                                              -------                                                                                              -------                                                            --------->GLK1(2)               ---------         <---------ARR14(2)                                <---------GLK1(2)            <---------ARR11(3)         --------->ARR14(2)           ---------->DOF2  --------->LBD16                 <---------CCA1(2)      --------->YAB1       ---------->DOF2     <---------ARR11(3)              --------->GLK1(1)   acattcactcatatactctagccactatccaaaggaacatcaaagtgaagataactccccagaatctagtatttgactgagaattctatatatctaacgc  9095900                     <---------At4g35610                     --------->At4g35610                  ---------->DOF2                <---------HSFB2a(2)                --------->HSFB2a(2)        <---------YAB1 --------->ZAT18 -->ANAC58      --------->LBD16              --------->MYB52(1) -->ANAC46     --------->LBD16            --------->YAB1                               <-----------RAV1(1) -->ANAC58    --------->LBD16   --------->ANAC55(2)                        ---------->DOF2       ---- >MYB52(1)  ------>ZmHOX2a(2)   <---------ANAC55(2)                    --------->CCA1(2)         ----   caataccattctgatccccgagaagctcacaactacgtattccagcataacagagatagaatagaactctaagataccaaagaaatgaaatgttgcctca  9096000  Previous    Next  AGI:  At3g24880.1    Description:  DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G24870.1); similar to Os08g0177300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061122.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46128.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78796.1); contains InterPro domain HAS subgroup (InterPro:IPR013999); contains InterPro domain Helicase/SANT-associated, DNA binding (InterPro:IPR014012); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain HSA (InterPro:IPR006562) Range:  from: 9086249    to: 9095544    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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