Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------WRKY18(1)                                                             -------->ATHB1                                                             --------->ATHB12                              <---------AHL20(2)             --------->ATHB51                       --------->TOE2(3)                    --------->AHL20(1)                      --------->ANAC46                      <---------AHL20(2)                      --------->ANAC55(1)                   <---------YAB1                      --------->ANAC58                      <---------ATHB51                      <---------ANAC55(2)                   --------->ICU4          ----------->GT1    --------->AHL20(2)           <---------ICU4     <-----------GT1      --------->DAG2  ----------->GT1               ----------->GT1   <---------MYB52(1)     ---------->DOF2  --------->ANAC55(2)        <---------AHL20(1)  ----------->GT1 --------->YAB1  --------->YAB1      --------->ANAC58       <---------AHL20(2)  <-----------GT1     --------->TOE2(3) <---------YAB1  <---------AHL20(2)         --------->AHL20(2)  ----------->HVH21  <xxxxxxxxxxxxxxxxx ------->YAB1   --------->AHL20(2)   <---------AHL20(2)  --------->ICU4<---------MYB52(1)           -   attatcaaaaagttgttatttaatacgtaaattttatatataaacatttaatatatgtaaaaattattgaccggttattttacacaaacttaattgttta  9060500                                                                                <---------AHL20(2)                                                                                --------->AHL20(1)                                                                                <---------AHL20(1)                                                                               --------->AHL20(2)                                                                              <---------YAB1                        <---------AHL20(2)                                  --------->YAB1                        --------->AHL20(1)                                  -------->HAHB4                        --------->AHL20(2)                                 --------->ICU4           <                  --------->TOE2(3)                                --------->AHL20(2)              --                 ----------->GT1                                   --------->AHL20(1)         <------                ------>MYB46(1)                                    <---------ARR11(3)         <------                ------>MYB83                             <----------DOF2   <---------ATHB12   -------               --------->MYB52(1)   --------->TOE1(3)    <---------DAG2 <---------AHL20(2)    <------           <-----------GT1          --------->TOE2(3) <-----------GT1  --------->AHL20(2)     <------ xxxxxxsmallRNA(se3)   <---------AHL20(2)     ----------->GT1      <---------AHL20(1)         <------ -------->At4g35610    --------->AHL20(2)     <---------ZAT6 <-----------GT1<---------ICU4   <-------   tcagccaaaatttataccaacgtaaaaaaattagataacattaacttagtgtaaaataacttttttctatatattaaatgattatattcaaagtttacgt  9060600        <---------ARR11(3)        <---------AHL20(1)        --------->ARR11(3)        --------->AHL20(1)      ------->TEIL                                                       --------->ARR11(3) ---------AHL20(2)                                                       <---------ARR11(3) ------->AHL20(2)                                                       --------->CCA1(1) ---ANAC58                                                              --------->RVE1(1)      <----- ---ANAC46                                                  <---------AHL20(2)  <---------AHL20(1) -->ANAC55(2)                  <-----------GT1              --------->AHL20(2)  --------->ARR11(3) ---ANAC55(2)           --------->ANAC55(2)                --------->AHL20(2)  <---------CCA1(2)  <-- ---ANAC55(1)           <---------ANAC58       --------->ANAC58     --------->AHL20(2)         <----- ---ANAC58              <---------ANAC46       --------->ANAC58   <----------DOF2          <---------ICU4 --TOE2(3)              <---------ANAC58       --------->ANAC46   --------->TOE2(3)     --------->YAB1   attaaatgaatattttttaaaaatttgcgtattaaactatatttttctcaagcaaactcaaattaatactttaaatatctcatatattgttcataattta  9060700                                                                  <---------AHL20(1)                                                             <---------AHL20(2)                                                             --------->AHL20(1)                                                             --------->AHL20(2)                                                             <---------AHL20(1)                                                            <---------ATHB12                                                   <---------AHL20(2)                                                   --------->AHL20(2)            <----------DOF2                                                  <---------AHL20(2)          <-----------GT1                                                  --------->AHL20(2)    <---------YAB1     --------->DAG2                           --------->AHL20(2)  --------->AHL20(1)    ---------->DOF2                           --------->AHL20(1)  --------->AHL20(2)               <- ----AHL20(2)                                 <---------AHL20(2)  <---------AHL20(2)             ---- --------DOF2     <---------TOE2(3)          <---------AHL20(2)  <---------AHL20(2)              <--- ------GT1   <----------DOF2                 --------->AHL20(2)  --------->AHL20(2)             -----   cttttgtaaagtagacttttaagttttaatcagatagaatacaaaaattaaattaaattccaattaattaaattttgatttatcttttttcgaagaaaat  9060800        --------->At4g35610                                                      <------------CBF        <---------At4g35610                                                   >>>>>>>>>>>>>>>>>LFY      <-----------RAV1(2)                                                    <-----------GT1   --------->WOX13(1)                                                     <---------ICU4 --------YAB1               --------->TOE1(3)                             <---------AHL20(2)      <-- ----->YAB1           ----------->HVH21                               <---------AHL20(2)------>ZmHOX2a(1) ------ICU4         <----------DOF2                               --------->AHL20(2) ---------->ID1 ---->ICU4----------->HVH21 --------->TOE2(3)         <---------YAB1  --------->AHL20(2)<----------DOF2   gatgacaatcaggtgagagggcctttgacaccttaaaaatttgtctaatttgttttttgattcgattttaaaataaatatttccattgtccttttagttt  9060900                                                                                         --------->LBD16                                                                                        --------->LBD16                                                                                       <---------LBD16                                                                                       <-------------                                                                                     ------>MYB46(1)                                ------>ZmHOX2a(1)                      <-------TEIL  ------>MYB83                          <-----------GT1 <---------ANAC58            --------->GLK1(2)--------->HSFB2a(2)                         <-----------GT1  <---------ANAC58           <---------ARR14(2)<---------HSFB2a(2)                     <---------DAG2    <---------MYB52(1)        --------->LBD16   --------->AtMYB61   *TSS    --------->AHL20(2)  <---------ALFIN1                <---------LBD16  <---------ALFIN1 <----------DOF2     <----------DOF2 --------->MYB52(2)     <---------ETT(2)   --------->MYB46(3) <---------DAG2   <-----------GT1  ------>ZmHOX2a(1)        --------->ETT(2)---------->DOF2     ----- ---------GT1  <---------ICU4------>ZmHOX2a(1)     <----------DOF2  --------->GLK1(1)-------->P------   tcactttttcagattaaaaatcacttttttcctcctccttcgttgcttccctcctttcgctctcgaccggagattcagtaaaccaccttcccggagatgg  9061000                                                                                            ---------                                                                                            ------>NtERF2                                                                                            <--------                                                                                           --------->RAP2.3(2)                                                                                           --------->RRTF1(3)                                                                                           --------->DEAR3(1)                                                                                          --------->RAP2.3(1)                                                                                         --------->ABI4(1)                                                                                         ------>NtERF2                                                                                         <---------ATERF1(1)                                                                                        --------->ANAC46                                                                                        --------->ATERF1(2)                                                                                        --------->RAP2.3(3)                                                                                        --------->RAP2.3(2)                                                                                        <---------ALFIN1                                                                                        --------->RAP2.6(2)                                                                                        <---------ATERF1(2)                                                                                        <---------DEAR3(1)                                                                                        --------->DEAR3(1)                                                                                        --------->RRTF1(2)                                                                                        --------->RRTF1(3)                                                                                       --------->RRTF1(1)                                                                                       --------->RAP2.6(1)                                                                                       --------->ATERF1(1)                                                                                       --------->DEAR4(2)                                                                                       --------->ERF1                                                                                       <------NtERF2                                                                                       --------->ORA47(2)                                                                                      ------>NtERF2                                                                                      <---------ATERF1(1)                                                                                      --------->At4g35610                                                                                      --------->DREB2C(1)                                                                                      <---------DREB2C(1)                                    ----------------->AGL1                            <---------RAP2.3(1)                                  <---------ARR14(2)                                  <---------DEAR4(2)                                  --------->ARR14(2)                                 --------->RAP2.3(3)                               <---------ANAC58                                      --------->DEAR3(1)                               <---------ANAC58                                      --------->RAP2.3(2)                               <---------ANAC46                                      --------->RAP2.6(2)                              <------NtERF2                                          <---------DEAR3(1)                              ----------------->AGL1        <---------MYB55(2)      --------->ATERF1(1)                             ------>NtERF2                ------>MYB46(1)           --------->RAP2.3(1)                             --------->ABI4(2)            -------->P                --------->RRTF1(1)                           --------->ATERF1(1)           <---------ALFIN1           --------->ERF1                           ------->PIF5                 <---------MYB111(2)         --------->DEAR3(2)                          <---------DEAR4(2)            --------->DEAR3(1)         <---------ATERF1(1)                          <---------ATERF1(1)           <---------MYB55(2)<---------ANAC58--------->RRTF1(1)                          <---------DEAR3(2)            --------->MYB46(3)--------->ANAC55(2)                         <---------DEAR3(1) --------->YAB1------>MYB83<---------GLK1(1)--------->RAP2.3(1)                        <---------LBD16     <------ZmHOX2a(1)   <----------DOF2   --------->ARR14(2)                        <------NtERF2 <-------GAMYB    --------->ANAC58   <---------ANAC58--------->ATERF1(1)                        --------->ATERF1(1)----------->GT1--------->MYB52(1) --------->SPL7--------->RAP2.6(2)   <-------TEIL        <---------RAP2.3(1)<---------TOE1(3) --------->MYB46(3)    <---------ARR14(2) ----AGL1             <---------DEAR3(1)  <---------TOE2(3)<---------ALFIN1<---------SPL7<---------RAP2.3(1) ------>GT1      ---------->DOF2 <---------MYB52(1)    --------->ANAC58  --------------->AtSPL3 ----->GT1  ----------->GT1<-------PIF5<---------MYB52(1)--------->MYB55(1)--------->LBD16<------NtERF2   gaaaatacattaagaagtcaaaagtcgccggtgccgtttccgttaaggataaatctcacccacccgctctaggtttccgtaccagagccgccgccgctaa  9061100                                                                         --------->RAP2.3(2)                                                                         --------->RAP2.3(3)                                                                         --------->DEAR3(1)                                                                        --------->ATERF1(1)                                                                        --------->RAP2.3(1)                                                                        <------NtERF2                                                                        --------->ORA47(2)                                                                        --------->DEAR4(2)                                                                       <---------ATERF1(1)                                                                       ------>NtERF2                                                                      --------->RAP2.3(2)                                                                      --------->RRTF1(3)                                                                      --------->RAP2.3(3)                                                                      --------->DEAR3(1)                                                                     --------->DEAR4(2)                                                                     --------->ERF1                                                                     --------->ORA47(2)                                                                     --------->RAP2.3(1)                                                                     --------->RRTF1(1)                                                                     --------->DEAR3(2)                                                                     --------->MYB46(3)                                                                     --------->RAP2.6(1)                                                                     <---------ABI4(2)                                                                     <------NtERF2                                                                    --------->ZAT2                                                                    --------->At4g35610                                                                    <---------At4g35610                                                                    --------->ABI4(2)                                                                    <---------RAP2.3(1)                                                                    <---------ATERF1(1)                                                                    ------>NtERF2                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                             --------->ARR14(2)                                                            --------->At4g35610     <---------HSFC1(2)                                                            --------->ZAT2    <---------O2                                                            <---------ZAT2    <---------ANAC46                                                     -------->P<---------LBD16--------->O2                                                   <---------MYB46(2)--------->ATERF1(1)          <---------ALFIN1                         <------------MYB.PH3(2)<-----------HVH21         --------->MYB46(3)                        <---------MYB111(2)--------->RAP2.6(2)       --------->ANAC46              <---------At4g35610    <---------At4g35610     --------->HSFC1(2)      --------->DEAR3(1)<---------YAB1           <-----------GT1 --------->LBD16    <---------At4g35610 >At4g35610          <---------MYB52(1)       <----------DOF2<---------ARR14(2)     --------->HSFB2a(1) -At4g35610  --------->DEAR3(1)      --------->At4g35610  <---------ALFIN1------>NtERF2   aaacctcgccctccaccgtctccgttctcattccgacgaagcagactcctttaactacctccagctccggagccgccgtctcgtgaagcttccattactc  9061200                              --------->KAN4(2)                          --------->At4g35610                          <---------At4g35610                      ----------->RAV1(1)                                        --------->SPL7                      --------->MYB52(1)                                         <---------LBD16                   --------->ANAC58                                            <-----------HVH21                   --------->ANAC58                                            <---------SPL7                   --------->ANAC46                                         <---------LBD16                 --------->At4g35610             <-----------HVH21        --------->ARR14(2)              <---------At4g35610           <---------ATHB12     --------->STY1(1) --------->LBD16              --------->At4g35610     <---------ZAT6   --------->ANAC58   <---------ARR14(2)       <-             ----------->RAV1(1)   ------>ZmHOX2a(1)   --------->ANAC58 ----------->ARR10      ------     <---------HSFB2a(2)--------->MYB46(3)--------->WOX13(1)     <---------STY1(1)<---------DEAR3(1)<   actaataccagaaaacagcagaagcaacagctcattcctagtgtcaatcaatgtcaaacgaaaaaccctagggctagttccggtccggcgaagaaattag  9061300         --------->DEAR3(1)       <---------YAB1                                                   --    --------->CCA1(2)           <---------ICU4          ----------->GT1                            --   --------->ARR14(2)          --------->ICU4       <---------YAB1                                 --   <---------ARR14(2)<---------ANAC58            <---------AGP1                 --------->ATHB12   -- --------->LBD16     <---------ANAC58      <-----------ARR10             <---------TOE2(3)         -- --------LBD16      <---------HSFC1(2)     --------->ARR11(3)          ---------->DOF2             -- ---->DOF2------>NtERF2   ----------->GT1  <---------ARR14(2)         --------->CCA1(2)   --------->YAB1 ---------ANAC46    --------->HSFC1(2)     <---------ARR11(3)--------->ICU4    <---------YAB1      <-   agccggatacgacgacggaagaagcttgtggtgataatgagagaatatctaggtctgattgtaattttggagataaaggttttgatttggaatcagaaaa  9061400  Previous    Next  AGI:  At3g24810.1    Description:  ICK3 (kip-related protein 5); cyclin-dependent protein kinase inhibitor. Identical to Cyclin-dependent kinase inhibitor 5 (KRP5) [Arabidopsis Thaliana] (GB:Q9LRY0); similar to ICK6/KRP3 (KIP-RELATED PROTEIN 3), cyclin binding / cyclin-dependent protein kinase inhibitor [Arabidopsis thaliana] (TAIR:AT5G48820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70215.1); contains InterPro domain Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); contains InterPro domain Cyclin-dependent kinase inhibitor; (InterPro:IPR003175) Range:  from: 9060903    to: 9062005    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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