Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------AHL20(2)                                                             --------->ANAC46          --------->AHL20(2)     --------->REM1(1)                                       --------->ANAC58 --------AHL20(1)                <---------bZIP60(1)                                     ----------->GT1 ------->AHL20(2)                --------->bZIP60(1)                                     --------->ANAC55(2) ------->AHL20(1)            --------->TOE1(3)                                           <---------ANAC55(2) ------ARR11(3)              --------->TOE2(3)                             ---------->DOF2 ----->AHL20(1)              <---------MYB59                         ----------->GT1     --------->ANAC58 ------AHL20(1)           <-----------GT1                          <------ZmHOX2a(1)     --------->ANAC55(1) ----->ARR11(3)         <----------DOF2                  ----------------->AGL3   ----------->GT1 -->AHL20(2)            <---------DAG2              <-------TEIL <---------TOE2(3)--------->YAB1 <---   atattttagtcattaatttctttcaactttaccttacatcacatcttcagaaaatgcatatcaattttaggaagtcaaaaagaatagtaatacgtaatat  9039700                                --------->DOF5.7(2)                                --------->At5g28300                               ------->GAMYB               --------------->AGL15                               ----------->GT1<---------ARR11(3)         --------->ZAT6     <-----------GT1   <---------GLK1(2)       <-----------GT1      --------->MYB52(1)--------->ARR11(3)            ---------->DOF2 --------GT1     <---------ANAC55(2)   --------->AHL20(1)  <---------------AGL15    >>>>>>>>>EIN3   aaccatttttaactctatcacttaaaaatttaacggtaacatatattagatttttaaaattctaaaaatagcctgattaaaagtatacattgcaaagagt  9039800                                                                                                   --                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                                          --------->AHL20(2)                                                                                          <---------AHL20(2)                                                  <----------DOF2                        --------->YAB1                                             <----------DOF2                            <---------YAB1                                          <---------ANAC58                            --------->YAB1-                                          <---------ANAC46                        <---------AHL20(2)<                                    <---------AHL20(1)                           --------->AHL20(2)<-                      <---------WRKY18(1) <---------ANAC58                    ----------->GT1  <-----                     ----------->HVH21   <---------LBD16                      <------ZmHOX2a(1)------             <-----------GT1        <---------AHL20(2)              <---------TOE2(3) --------->AHL20(2)       --------->AHL20(2)           --------->AHL20(1)      <---------TOE2(3)----------->GT1---------       <---------AHL20(2)          --------->AHL20(2)    <---------AHL20(2) <---------TOE2(3)  ------   tcgatttgataaattttacaaacttgaccgtaagagattatattgcgcattacttttattttaagaaattaagaaatgaaggataaaattataaaaatat  9039900                                                                --------->ZAT6     <-----------GT1                                          --------->YAB1 ------->ICU4                                                <---------YAB1 ----->YAB1                                               <------ZmHOX2a(2) -----AHL20(2)                                           --------->ARR11(3) ----AHL20(2)                                       --------->AHL20(2) -------->ATHB12                                    --------->YAB1      --------->DAG2 ---------ICU4                                      -------->HAHB4  --------->YAB1 --------YAB1                                      --------->ICU4  --------------->AGL15 ----AHL20(1)   <---------YAB1                     <---------YAB1--------->YAB1 --->AHL20(1) <---------AHL20(2)            <----------DOF2--------->YAB1----------->GT1 >AHL20(2)  <---------AHL20(2)              --------------------->WRI1 ---------->DOF2             -- --->AHL20(2)<---------YAB1           <-----------GT1    <---------ARR11(3)                        --   aatgatttttctatttttatttttgcagaaaacatttttgtaacaactttgtaattatagatcataatactaataaagttaaaaaaaaaacatttccaaa  9040000                                          <-----------GT1                                      <----------DOF2               ----------->HVH21  --------->ZAT14              <-----------HVH21   <---------ZAT18             --------->LBD16   <------------CBF             --------->ANAC46 <---------ICU4--------->ANAC46                                     <---            --------->LBD16   -------->ATHB1--------->ANAC58                                ---------           <---------LBD16    --------->ATHB51                                          --------->ANAC58       <---------ARR14(2)     --------->ATHB12                               ------------>CBF  *TSS       --------->ARR14(2)    <---------YAB1 --------->ANAC58           <<<<<<<<<TBF1    --------->ANAC58      <----------TaMYB80     <---------ATHB12                       <<<<<<<<<TBF1 --------->YAB1<---- ------->CCA1(1)     <---------GLK1(2)<---------DAG2             <<<<<<<<<TBF1--------->MYB46(3)----- ------->RVE1(1)  <---------ALFIN1<---------ZAT14     <------------------------ANAC81 ---------->DOF2   aatatcgcaaattcccggtcacacattctccatcattgcacttttcacgctctctctgtcttccttcttcttcttcttcaacaatcttcaaagcaaaaga  9040100                                                                     ----------->HVH21                                                                     --------->TGA2(2)                                                                    <-----------TGA1                                                                    <-----------HVH21                                                                   --------->bZIP60(2)                                                                   <---------bZIP60(1)                                                                   <---------TGA1a                                                                   --------->bZIP60(1)                                                                   --------->TGA1a                                            =================================MYC_MYB             <-----------HVH21         --------->YAB1              <---------O2  ----------->RAV1(1)                 <---------ATHB12             --------->O2            <---------At4g35610 --------->MYB46(3)            --------->GLK1(1)    --------->MYB46(3)                     --------->At4g35610 ---ZmHOX2a(2)              --------->LBD16 -------->P  >>>>>>>>>RAP2.2        --------->WOX13(1) ->DOF2 --------->AHL20(2) --------->HSFB2a(2)--------->TOE2(3)    --------->ANAC46      --------->YAB1 -----ARR11(3)             <---------HSFB2a(2)--------->TOE1(3)   <-----------STF1  ------>ZmHOX2a(1) ---->ARR11(3)        --------->MYB46(3)    ------->TEIL--------->TOE2(3)   --------->GLK1(2)   tcaacaacaaaaaaatgtcagacaacaatccagaaatcgaatcatcaaccttcaacaatctaaacatcgacgtcacagaatcaatcctctatcatctccc  9040200                                                --------->YAB1                                           <---------ZAT14                                           --------->ZAT14                                          --------->DOF5.7(2)                                --------->ANAC46<---------ICU4                              <--------                  <-----------GT1       <---------ANAC46                      ------>ZmHOX2a(1)       --------------------->WRI1<---------ATHB12  <---------ALFIN1     ------>ZmHOX2a(1)  --------->MYB46(3)       ------>ZmHOX2a(1)--------->O2    <---------ANAC58          ------>ZmHOX2a(1)   <---------ICU4      --------->TOE2(3) --------->TGA1a <---------ANAC58       ------>ZmHOX2a(1)      --------->YAB1   aatcccttccttagtccgtttcactctcgtctccaaacaatggcgttcactcatcacctctcttcctccttctccttctccttctccatcatcaccacca  9040300                                             <---------ATHB12                                            ------>MYB83                                            ------>MYB46(1)              ----------->RAV1(2)                                          --------->AtMYB61              --------->ZAT2            --                                <----------DOF2 ------>ZmHOX2a(1)      <---------ALFIN1            ==                              ------>ZmHOX2a(1) ==================HOX2a_HOX2a                      ==                       <---------ALFIN1  --------->MYB46(3)          ================RAV           ==                     ----------->RAV1(1)--------->ANAC58      ------>ZmHOX2a(1)                 =====                    --------->ANAC46    --------->ANAC58   <------ZmHOX2a(2)                    =====                  --------->ANAC46    --------->MYB46(3)  --------->ARR14(2)                    =====               <---------ARR14(2)   --------->ANAC46 <----------DOF2 ----------->RAV1(1)    ------>ZmHOX2a(1)       ------>ZmHOX2a(1)      ====================================HOX2a_HOX2a               ========= -ALFIN1       --------->ARR14(2)   --------->HSFB2a(2)   <---------ARR14(2)    <------NtERF2   -----   tggctcttcctcttcggtatccacaacacttcctctttccacaaccaatccttcgctttcgatcctctctccaacacctggctccgtctccctccttcct  9040400                        ------>ZmHOX2a(2)                        ===================HOX2a_HOX2a                        ===================================HOX2a_HOX2a                       <------ZmHOX2a(2)                       ====================HOX2a_HOX2a                       ====================================HOX2a_HOX2a                      <---------AGP1                      <-----------ARR10                      <---------ARR14(2)                     <---------CCA1(2)                    <---------DEAR3(2)           --------->YAB1          <------ZmHOX2a(2)          <---------ATHB12          =================================HOX2a_HOX2a     ------>ZmHOX2a(1)--------->ARR14(2)                                             <---------WOX13(1)     ==========================HOX2a_HOX2a                                         ------>MYB83     =========================HOX2a_HOX2a                                        <---------MYB59 ---->ZmHOX2a(1)   <---------TOE1(2)                                       ------>ZmHOX2a(1) ================HOX2a_HOX2a                        ------>ZmHOX2a(1)     --------->TOE1(3) =============================HOX2a_HOX2a     --------->DEAR3(1)          --------->TOE2(3) ==============================HOX2a_HOX2a    <---------ALFIN1          <---------ATHB12 =============================HOX2a_HOX2a  <---------ALFIN1            ------>MYB83------>MYB46(1) ==============================HOX2a_HOX2a --------->DEAR3(1)          ------>MYB46(1) ================HOX2a_HOX2a               --------->AtMYB61         --------->MYB46(3) ================HOX2a_HOX2a              --------->MYB46(3)         --------->AtMYB61        <------ ->ZmHOX2a(1)    <-----------HVH21  ------>ZmHOX2a(1)         ------>ZmHOX2a(1)  --------->TOE2(3)   cctcttcctccgatcatctcgtcggatctaatcgcttcctcttcaccaccgctcctcgcttctccttctcaccaatccttaaacctaattggcgattcac  9040500                                                                                              -------                                                                                              -------                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                      ------>ZmHOX2a(2)                                                                                     <---------GLK1(1)                                                                                    <---------ARR11(3)                                                                                    <---------AGP1                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                                                    --------->ARR11(3)                                                                                    <-----------ARR10                                                                                   <---------CCA1(2)                                                                                  <---------MYB46(3)                                                                                <-------GAMYB <------                                                                               <---------MYB46(3)                      --------->WOX13(1)                                       <---------DEAR3(2)               <---------HSFB2a(2)                                            <---------DREB2C(2)               --------->LBD16            <-----------GT1                     <---------At1g77200               ------>ZmHOX2a(1) <-----------GT1                              <---------DEAR3(1)  <--               --------->HSFB2a(2) <------------MYB.PH3(1)                  <-----------HVH21<------- ----------->RAV1(2)<---------ATHB12  <---------MYB52(1)                  ------>ZmHOX2a(1)--------->ANAC55(2) -----GT1 <---------GLK1(1)------>ZmHOX2a(1)         <---------MYB59      ===================HOX2a_HOX2a   ttcccctgttcgatttcctcgaatcaatcctctcttaaccgttttcacaactctatctaactcatccaaactaatcctcgtcggtggatcttcgcgtatc  9040600  Previous    Next  AGI:  At3g24760.1    Description:  F-box family protein. Identical to F-box/Kelch-repeat protein At3g24760 [Arabidopsis Thaliana] (GB:Q3EB08); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G23390.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65567.1); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 9040095    to: 9041841    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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