Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------MYB59                                                     --------->TOE1(3)                                                     --------->TOE2(3)                                                     --------->AtMYB61              --------->ARR14(2)                    ----------------->AG              <---------ARR14(2)         <---------TOE2(3)          --------->LBD16         --------->LBD16  ------>MYB83                              <-------        <---------LBD16         <---------LBD16    ------>MYB46(1)                       --------->AHL20(2)        ------>ZmHOX2a(2)     ------>MYB83--------->YAB1                                 <---------AHL20(2)      --------->ARR14(2)      ------>MYB46(1)      -------->P               <---------HSFB2a(2)      <---------ARR14(2)      --------->MYB52(1) --------->AtMYB61          --------->HSFB2a(2)    <---------YAB1          --------->AtMYB61   --------->MYB46(3)     <---------At4g35610   --------    ----------->ARR10       <---------MYB59--------->TOE2(3)           --------->At4g35610   <------- ------------------>WRI1 <-----------GT1 <---------YAB1        <----------DOF2 <<<<<<<ZML2   --------   tttagtatgatccgcagttctacaatataaccaaaccggaattaacataaaccaacctaaaccggctttaatcagctactagaacaagagattaattaat  9030500                                           <---------------------WRI1                                         ------>ZmHOX2a(2)     --------->ARR14(2)                 <------ZmHOX2a(2)     --------->GLK1(2)                 --------->ARR14(2)    <---------GLK1(2)                  <---------ARR14(3) --------->ANAC46                      <---------ARR14(2) --AHL20(1)                            --------->ARR14(3) ->AHL20(2)                            --------->ARR11(3)       --------->YAB1                      - --AHL20(2)                            <---------ARR11(3)    <---------bZIP60(1)             -------- ->AHL20(1) --------->AHL20(2)   >>>>>>>>>TBF1               --------->GLK1(1) <-------TEIL  ------>ZmHOX2a(1)   tacccagaatccaatttcatatgatgcgcattgaagaagaagatcgtcgaaggaaacaacgtgatatcaaaatacttcacatacacttgaacatcctctg  9030600           ---------->DOF2          --------->AtMYB61          ------->GAMYB                                         ----------->GT1         --------->MYB46(3)                      --------->ARR14(2)        -------->P --------->TOE2(3)      ----------->HVH21   ---------->DOF2       --------->WOX13(1)            <---------ARR11(3)  --------->ZAT2                            --    --------->TOE2(3)              <---------HSFC1(2)    <---------At4g35610                  <------ -------->YAB1     --------->TOE1(3) --------->ARR11(3)  <---------ZAT2                    <---------YAB1 ->At4g35610     -------->P        --------->HSFC1(2)    --------->At4g35610    <----------DOF2<-----   aatcaacatcaaccaaagctaccttagcaaatttcgaaacatctctcaccgatttcgcaagctgaaaagaaaaattcgaaaactttaggggttttgatta  9030700                                                                               --------->MYB46(3)                                                                            <------ZmHOX2a(1)                                                                          <---------TOE1(2)                                                                         <------NtERF2                                                                       <---------DEAR3(1)                                                                      <------NtERF2  ------>MYB46(1)                                                                      --------->ATERF1(1)                                                                     ------>NtERF2 <---------MYB59                                                                     <-----------HVH21             <-           --------->GLK1(1)                                        <---------ANAC46 ------>MYB83  -- ------->YAB1               --------->CCA1(2)                       <---------DEAR3(1)  --------->YAB1 ---WOX13(1)               <----------ID1                      --------->MYB52(1)  --------->AtMYB61 ----AHL20(2)        ---------->DOF2              <---------ICU4    --------->DEAR3(1)  ----------->GT1   atcgaaattagagaaatcgaattcaaagagagacgaattgaatacgatttcatcatgctgaagacaaacggcgtcggaggaacgaccaaatcgtaaaaca  9030800                                                                                            ---------                                                                                            ---------                                                                                          <----------                                                                                        --------->YAB1                                                                                     <---------ICU4                                --------->WOX13(1)               <---------ARR11(3) --------->ICU4      <---------YAB1          <------ZmHOX2a(2)    <---------DOF5.7(2)         <---------ANAC46 --------ARR11(3)             <---------ATHB12   --------->DOF5.7(2)          <------NtERF2 --------- ------->ARR11(3)   --------->YAB1            ---------->ID1 <---------At4g35610<---------SPL7   agaacttcatcaatggtgtctctgataacccgatcaatctcttccttcgtcgttaacgtcttcagaagataactcatctcggcgtaagaattatacgaca  9030900                                                            <---------YAB1                                                           --------->AHL20(1)                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                          --------->O2     <---------AHL20(1)                  <-----                                          <---------bZIP60(1)                                  ------                                          --------->bZIP60(1)                                  <-----                                          <---------O2  <---------AHL20(2)                     ------                                       --------->ANAC46 --------->AHL20(2)        ----------->GT1 >ANAC58                       <---------AHL20(2)       --------->YAB1           --------->ANAC58 >ANAC46                       --------->AHL20(1)    --------->YAB1            --------->MYB52(1) -GT1  --------->AHL20(2) --------->AHL20(2)        <---------YAB1 --------->At5g28300      --------- >ANAC58        ---------->DOF2--------->AHL20(2) --------->YAB1  ----------->GT1--------->ANAC58   <   tcgtttagataatataactaaagagacataaaataaaatatacgacgtcgtttgataataatataatacagtaactaaaacagacggaaaatatacgacg  9031000                                                     --------->MYB52(2)                                                   <---------MYB52(1)                                              --------->bZIP60(2)                                              <---------bZIP60(1)                 --------->YAB1               --------->DEAR3(1)   --------->YAB1                <---------YAB1                <---------bZIP60(2) <---------AHL20(2)               <---------AHL20(2)             --------->O2        <---------YAB1 --------->ANAC58               --------->AHL20(2)             =======================================bZIP_DOF      ----------->GT1    ---------->DOF2      --------->bZIP60(1)<---------AHL20(2) <----------DOF2<---------AHL20(2)            <---------TGA1a    <---------AHL20(1) ----bZIP60(1) --------->AHL20(1)             <---------O2    --------->YAB1   --------->CCA1(2) --->bZIP60(1) <---------AHL20(1)             --------->TGA1a <---------AHL20(2) --------->ANAC46 ----O2     --------->YAB1                 ----------->HVH21  --------->AHL20(2) --------->ANAC58 --->O2     --------->AHL20(2)         =================bZIP_DOF --------->AHL20(2)   ------->PIF5 >ANAC46    <---------AHL20(2)         ---------->DOF2  ----------->GT1   ---------->DOF2 ---------MYB52(1)       ===============================bZIP_DOF --------->AHL20(1)   <-------PIF5   tcgttttttggtaataatataataactaaaagagacacagattaagcgacgtcgtttgtggtaataatataataactaaagagacgcaagtgcaaatgtt  9031100                       --------->YAB1                     --------->AHL20(2)                    --------->YAB1                   --------->AHL20(2)                                                        <-------                 --------->YAB1           <---------ARR11(3)                     <---------CCA1(2)              --------->YAB1          --------->YAB1                           ------>ZmHOX2a(1)    -           --------->TOE1(3)  ----------->GT1                        >>>>>>>>>MYB98       <---------ARR11(3)    *TSS   --------->TOE2(3) --------->ALFIN1    <---------GLK1(2)<---------MYB46(2)    <---------At4g35610 <---------YAB1--------->AHL20(2)  --------->GLK1(1)    <----------DOF2       --------->TOE2(3) -----   tttgtgataaaaaccataaaaataaaaataagtggagaaatcaaaatcatcgattctcctttgtttcgcctaacccaattcctaaatctcagcatctttc  9031200                                                                                                   --                                               --------->TOE1(2)                                   <-                                              --------->ATHB12                        ---------->ID1                                            --------->ARR14(2)    =================================== ---DOF2                                    <---------ARR14(2)    <---------------AGL15           --- -------->WOX13(1)                  <---------GLK1(2)  --------->ANAC58         <-----------GT1 <---- ---->YAB1      ---------->DOF2   --------->ICU4       --------->ANAC58  ----------->GT1<----------DOF2   atcaatccaatctctcaaataagcgagagagaaacaaagattatcgaatccttggagacgaaaacatactccaatttgtaattttctcgtcttttttttt  9031300                                                                              --------->CCA1(2)                                                                             --------->ARR14(2)                                                                             --------->ARR11(1)                                                 <---------MYB52(1)          --------->ARR11(3)                                            ------>ZmHOX2a(2)              ----------->ARR10                                           <---------GLK1(1)              <--------P              <--                                          <---------ARR11(3)            <------MYB46(1)          ----                                          --------->ARR11(3)            <------MYB83             <--- ------------->AGL15                ----------->HVH21                  --------->MYB59           <--- --------MYB59             --------->ATHB12--------->GLK1(1)         --------->CCA1(2)      <-------- ==============MADS_MADS  --------->ICU4  <---------AGP1          <---------TOE2(3)     <---------TOE2(3) ------>ANAC55(2)         <---------ATHB12------->TEIL  <-----------GT1--------->MYB111(1)<------ZmHOX2a(1) -------GT1          ------>ZmHOX2a(2) <---------WOX13(1)    <----------DOF2 <---------ARR14(2)  ----   acctgattttgttatacgtttgatcgaaatcatttgctctgatggatctctgttttgttaacccttttgagatttggtagatatggttttgaggattgat  9031400  Previous    Next  AGI:  At3g24730.1    Description:  catalytic. similar to YLS8 (yellow-leaf-specific gene 8), catalytic [Arabidopsis thaliana] (TAIR:AT5G08290.1); similar to unknown [Picea sitchensis] (GB:ABK21102.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain mRNA splicing factor, thioredoxin-like U5 snRNP; (InterPro:IPR004123) Range:  from: 9030013    to: 9030901    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g24740.1    Description:  similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G25910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63812.1); contains InterPro domain Protein of unknown function DUF1644 (InterPro:IPR012866) Range:  from: 9031104    to: 9033847    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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