Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->RAP2.3(1)                      --------->LBD16                      ------>NtERF2                      <---------ATERF1(1)                     <---------DEAR3(1)                     --------->ANAC46                    <---------LBD16           --------->LBD16        ------>ZmHOX2a(2)                                                                       <----       <------ZmHOX2a(2)                                                                    <--------      --------->ARR11(3)                                      ----------->GT1       <----------DOF2 -      --------->ARR14(2)                   ------>ZmHOX2a(1) ----------->GT1<---------ARR11(3)  <----      <---------ARR11(3)    --------->ZAT14<---------YAB1   --------->DAG2 <---------ICU4 --------->ANAC46      <---------ARR14(2) ------>NtERF2    --------->TOE2(3)---------->DOF2 --------->YAB1------>ZmHOX2a(1)   aactctaagatcccccaatacctccggcgctatactcttggcatcctcatagacaaggctgaaaagttaaaaatccatgatcactcctttcctcgcaggc  9024000                                                                                            ---------                                                                                            <--------                                                                                           --------->GLK1(1)                                                                                    --------->ANAC58                                                                                   --------->SPL7                                                                                 <---------SPL7   ---                               ----------->RAV1(2)                             --------------->AtSPL3       --------->HSFB2a(2)     <---------LBD16  --------->ZAT14          <-----------GT1   <---------GLK1(1)       <---------------AGL15------>MYB83        <---------ZAT18     <---------ANAC58--------->ANAC46       <---------HSFB2a(2)  ------>MYB46(1)  <----------DOF2        <---------ANAC58--------->ANAC58 -----ANAC58         <----------DOF2    ------->TEIL            <---------ANAC58<---------ANAC58 <--- ---RAV1(2)     <---------ANAC58    <---------WOX13(1)          <---------ANAC58<---------ANAC58----- ---------------->AGL2 <-----------GT1 <---------GLK1(2)   --------->TOE2(3) ------------------>SPL14 -----ANAC58    <---------ANAC58  --------->ATHB12    <----------DOF2   ---------->ID1    --------->ARR14(2)   gttccatttccagacatagcatgctttaccatcccctgattgaatctctttgcactctttacattagcgttcttgtctccatccgtacgccatatatccg  9024100                            ------>ZmHOX2a(2) --------->ANAC46  <-------TEIL            <---------ARR11(3)  --------->ANAC55(2) >ARR14(2)                --------->ARR11(3)  --------->YAB1 -ARR14(2)----------->RAV1(1)   --------->ARR11(3)                                       ------------ ------>SPL7         ------->TEIL ------>ZmHOX2a(2)                            ------>MYB46(1) ------MYB52(1)  --------------->AtSPL8  <-------TEIL                <----------DOF2--------->REM1(1) ---->LBD16 --------->MYB46(3)  <---------ARR11(3)        <---------TOE2(3)    ------>MYB83  ------->TEIL   taggctcgtttccaacagctatgtacttgatcttgatcttggattcatacataacacatgaaggaagttggctttaagaccaagcttcaacattgtacct  9024200                                    =========================MYC_MYB                                  -------->P                                  ===========================MYC_MYB                              --------->ANAC58                              --------->ANAC58                            =================================bZIP_DOF                            --------->REM1(2)                            ---------->DOF2                           ----------->HVH21                          --------->LBD16                        <------NtERF2                       <---------RAP2.6(3)                       ------>NtERF2------->GAMYB                      --------->RAP2.3(3)                      --------->RAP2.3(2)                                                     <------                      --------->RRTF1(3)                    ----------->HVH21                 -------                      --------->RAP2.6(2)                 ----------->RAV1(2)               =========                      --------->DEAR3(1)                  --------->At4g35610     ------>NtERF2                     --------->DEAR3(2)            ====================================bZIP_DOF                     --------->ATERF1(1)           --------->O2                   <---------DDF1                     --------->MYB46(3)            --------->TGA1a                <---------RAP2.6(3)                     --------->ERF1--------->MYB46(3)<---------CCA1(2)            ----------->RAV1(1)                     --------->RAP2.3(1)        ------>ZmHOX2a(1)                 ===================                    <---------At4g35610 <----------DOF2   <---------At4g35610    --------->DEAR3(1)          ---------->DOF2<---------ANAC46     ------>ZmHOX2a(2)                  --------->RAP2.6(2)< --->AtSPL8         --------->At4g35610 =====================bZIP_DOF       ---------->DOF2 <--------   ctgtgccttctccaaagccttgagccgccgtgaagcaacctcctttgatcctcccgtctcttctgacacaatctcccctaaagccgacattacatcagat  9024300                                                                                           --------->ANAC55(1)                 --------->ANAC58                                                          --------->ANAC46        --------->ETT(2)                                                                   --------->ANAC58     <-----------RAV1(1)                  <---------ANAC55(2)                       <-----------RAV1(1)  <---------ARR14(2)                  <-----------HVH21                         <---------ANAC58 <---------GLK1(1)                   --------->REM1(1)                          <---------ANAC58 ---At4g35610    --------->ANAC58--------->ZAT2                                <---------ZAT2 -->At4g35610--------->ANAC58    <---------ZAT2                              <------NtERF2 --------->ANAC58 ================RAV----------->RAV1(1)   --------->ANAC55(2)               --------->LBD16--------->ANAC55(2) ===RAV <---------ETT(2)    --------->ANAC46                  <---------ANAC58--------->ARR14(2) ----------DOF2  --------->ANAC46--------->At4g35610          <---------ANAC58<---------ARR14(2) ---RAV1(2)  --------->ANAC58    <---------At4g35610       <----------DOF2<---------LBD16  <---------ANAC55(2)   ggcatttctgtcgacgagccagccacataaacgacagctccatcacataacaaatcccaaactttcttgctcatctcgcggagcttgtgttgcacgtaaa  9024400                                            <----------DOF2                                         ------>MYB46(1)                                       --------->DEAR3(1)                                       --------->AtMYB61                                       <---------MYB111(2)                                       <---------ALFIN1                                      <---------ZAT2                       --------->ANAC55(2)         <------MYB46(1)              --------->bZIP60(2)                  <---------ANAC46         <------MYB83                 --------->ZAT2                       <---------ANAC55(1)        <---------AtMYB61            <---------ATERF1(1)                   <---------ANAC58        <---------MYB46(3)           ------>NtERF2                    ------>ZmHOX2a(1)       <---------MYB52(1)           <---------ALFIN1               ------>ZmHOX2a(1)      --------->GLK1(1)       <--------P                --------->ANAC58                 <---------ALFIN1       ---------->DOF2       <---------MYB55(1)        --------->ANAC46        --------->At4g35610           --------->LBD16      <-------GAMYB              --------->ANAC58        --------->ZAT14   <---------ANAC55(2)     <-      <---------MYB52(1)       ---------->DOF2           <---------ZAT14   <---------ANAC58   <------     <---------DEAR3(2)  <---------ANAC46------>MYB83    <---------At4g35610          <---------HSFB2a(2)     <---------MYB46(3) <-----------------------TaNAC69(2)      ------>ZmHOX2a(1)     --------->HSFB2a(2)   ccttcttcggttggtctctagagaatgctgtgtaaaagccacctcccttttattcagagagcagtcctcctcctcttgcgtgagactcccagaaatcgcg  9024500                                                                                               ------                                                              <---------ANAC58               --------                                                       --------->REM1(1)                    <--------                                                   --------->At4g35610                      <--------                             ------->GAMYB        --------->ANAC58          <-----------GT1<--------- ----------->GT1            --------->MYB46(3)    --------->ANAC58   <---------AtLEC2      ---------- -----------CBF        --------->HSFB2a(2)  ------------>CBF  <---------ANAC58      <-------TEIL ---- ---LBD16      <----------DOF2       ------------>CBF ------------>CBF  <------ZmHOX2a(1)  ----------   gtattgaaaatatgtgtctttgtttctgcaaccgaagaagacaatgaacaataagctacaatatgcgttttgcaggaataactatatacatgaagcgtac  9024600       <---------HSFB2a(1)       --------->HSFB2a(1)       --------->ZAT2       --------->At4g35610       <---------HSFC1(2)       <---------At4g35610       --------->HSFC1(2)   --------->ANAC46   --------->ANAC58                                        <-----------GT1   --------->ANAC58                                       <---------ICU4 --->SPL7                                                 --------->YAB1 ->ZAT18                                                 <---------ATHB12 -ANAC58                                    --------->GLK1(2) -ANAC58                 ============================================================================ ------AtSPL8            --------------->AGL15       ------------>CBF ----->AtSPL8------>ZmHOX2a(1)             <---------GLK1(2)                             ----------->GT1 ------->RAV1(1) <---------GLK1(2)         --------->ARR14(2)                   ---------->DOF2     < ----->AtSPL3<---------LBD16               <---------ARR14(2)                --------->AtLEC2     <--   aacacaagcagcttcctcggcttctctccgattagagaaaacacagattctaatctccaattatctcttctatagttctatgcaaagaaacaagttaaaa  9024700                                        --------->HSFB2a(2)                                         -                                        <---------HSFB2a(2)                                         <                                       <---------LBD16                                           <---                                     --------->GLK1(2)                                          <----              <------ZmHOX2a(1)     --------->ARR11(3)                                          ----- ===============MADS_MADS           <---------GLK1(2)    <---------ANAC58                     ------- ---------------AGL15      --------->At4g35610           <---------ANAC58                     <------NtERF2 ---------------AG         <---------ZAT2          --------->CCA1(2)   --------->YAB1       <--------   gactcttaagggaagaggagaagagagagagctcgaaagattctggagacttgatatgggcttgaagcccaaattataagttttatgagtttgggccgga  9024800                                                                                                    <                           <---------ANAC46                                                       ---                       <-------TEIL                                                               <--                      --------->ARR14(1)                                                         <---                     <---------ARR14(2)                                                          ----    --------->ARR11(3)--------->CCA1(2)                           <---------ANAC58               ---- -------->ANAC55(2)  --------->ARR11(1)                           <---------ANAC46               <--- ---------ANAC55(2)  --------->ARR14(2)                           <---------ANAC58              <---- ---ZmHOX2a(2) <---------YAB1                         <---------ARR11(3)                        ----- -----ARR14(2) <---------AHL20(2)                     --------->GLK1(2)                         ----- ---->ARR14(2)--------->AHL20(1)                     <---------GLK1(2)                     <---------LBD16 -->LBD16     <---------AHL20(1)         --------->YAB1--------->RVE1(1)                   --------->At4g35610 -LBD16       --------->AHL20(2)        <---------YAB1--------->ARR11(3) ----------->GT1   <---------At4g35610   tcatgtgatattggaatataatagatacgacgtagttttgatatcatcgtctccaaaatctctctcttccttgaaatgtgaattttaaaaatcagcggaa  9024900  Previous    Next  AGI:  At3g24710.1    Description:  similar to flavodoxin family protein [Arabidopsis thaliana] (TAIR:AT3G02280.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96847.1); contains domain (Trans)glycosidases (SSF51445); contains domain FLAVODOXIN-RELATED (PTHR19384); contains domain NADPH FAD OXIDOREDUCTASE (PTHR19384:SF10); contains domain Ferredoxin reductase-like, C-terminal NADP-linked domain (SSF52343) Range:  from: 9023967    to: 9024374    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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