Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->MYB52(2)                  <---------MYB46(3)                  --------->MYB111(1)                                                              --                  --------->MYB46(2)                                                              ---             <---------TOE2(3)                                                                  -----    ----------->GT1<-------GAMYB                                   ----------->GT1     --------->TOE2(3) --------RVE1(1)<---------MYB52(1)                                <---------------AtSPL8------>ZmHOX2a(1) --------CCA1(1)<--------P --------->CCA1(2)                      --------->DAG2       --------->TOE1(3) >YAB1       <---------TOE1(3)             ---------->DOF2      ---------->DOF2   <----------DOF2 <--   gatattttgttaattgaggttagttgcagagatgggtcatatttttaaagtcatatttttcaactaaaaaggtaaaaaaaaactcttttccttaagaaaa  9021900                                              --------->DAG2         <---------ARR11(3)                  ---------->DOF2         --------->ARR11(3)           --------->YAB1        --------->RVE1(1)            <---------YAB1        --------->CCA1(1)       --------->At4g35610                                                 < --------->GT1                  <---------At4g35610                                                -- ------>DAG2                 <---------At4g35610                                                  <-- ----->DOF2                  --------->At4g35610                 --------->YAB1              <------- -------------AtSPL8    <----------DOF2 <---------YAB1          <---------ATHB12        <-----------GT1   aaggtaaaaaatatctcttggaatcactttcagcagcttattataaaaaaagtagtattttttccaataacaatagatttgatttgagttttacaaattg  9022000                  <---------YAB1                 --------->AHL20(1)       <------------CBF--------->ANAC55(2)                  <------------CBF <---------WOX13(1) <---------AHL20(2)              <---------AHL20(2) ------------CBF--------->AHL20(2)                  --------->AHL20(2)                             <- ------->ATHB12 <---------AHL20(2)                  --------->AHL20(1)                             -- -------YAB1    --------->ATHB51  --------->TOE2(3) <---------AHL20(1)             <-----------GT1 -- -----CBF----------->GT1       <-----------GT1 ------------>CBF    --------->GLK1(2)    --------->At4g35610   ttgattgaatattgtgaattattttaagtgattttacataaattccaagttcaataaaatagaattgagaatttgttttaaaaaatcaccagttgaataa  9022100                                                             <---------WOX13(1)                                                            ----------------------->TaNAC69(2)                --------->ANAC58  --------->AHL20(2)   --------->ANAC58                          ----         ---------->DOF2       --------->YAB1          --------->ANAC58                        <----- --------ANAC55(2)        --------->LBD16             --------->SPL7                        --------- --------->GT1  --------->ANAC58 --------->AHL20(2) <---------MYB52(1)                    <---------- ------->ANAC55(2)  ---------->DOF2      ------------>CBF   <------------CBF          <-----------TBP   catgtaattttaaaagacacctaaaatccccaaaaataaaaaatccaatacacccttacgctaattgactagtatacctctcttctctatttataccaat  9022200                                          ------->TEIL                                          <-------TEIL                                          --------->SPL7                                         <---------SPL1(1)                                        <---------SPL7                                        <---------SPL1(2)                                        --------->LBD16                                       <---------ANAC58                                       <---------ANAC58                                      <---------------AtSPL3                                      --------------->AtSPL8                                      --------------->AtSPL3                                    <-----------GT1                                <----------DOF2                                <---------DAG2                                                  -----                               <---------ANAC46                                                 =====                               <---------ANAC58        --------->AHL20(2)                     <------ ------->GT1                   <---------ANAC58  --------->AtLEC2          --------->MYB52(1) ------- -------CBF               <-----------RAV1(1) <-------TEIL          --------->CCA1(2)  <---------ANAC58 --->CBF      <---------YAB1---------->ID1<---------TOE1(2)       --------->YAB1       <---------ANAC58 -GT1--------->TOE2(3)<---------RAP2.6(3)<---------MYB52(1)    ---------->DOF2       <---------YAB1 <   tgttaaaccctagtttatatttgcagtcttgttgcttttttccgtacgttcatacaaaaaaatcacaaagataaacaaaacggtatgatgcttactgatc  9022300                                     --------->ANAC46                                <----------DOF2                                     --------->LBD16                              --------->ANAC58                                   <---------LBD16                                --------->ANAC58                        ------>ZmHOX2a(1)        <---------REM1(2)               --------->SPL7  ----                    --------->ARR14(2)  <---------ALFIN1                         <---------ZAT18 <---                    <---------ARR14(2)------>NtERF2                            <---------SPL7   ----- ->ZmHOX2a(2)      <---------GLK1(1) ------>NtERF2                            <---------MYB46(3)----- ==============================HOX2a_HOX2a--------->O2                        <------MYB46(1)  <----- ---ARR11(3) --------->GLK1(2)   --------->ARR14(2)                           <---------DEAR3(2)<---- -->ARR11(3)<---------GLK1(2)    <---------ARR14(2)---------->DOF2            <------MYB83     ------ ---------ALFIN1   --------->GLK1(1)<---------RAP2.6(2)             --------->AtLEC2 <---------DAG2   ttccacttgatttagaatcggaaatcctctctagggttccggccacttctctacaaagactgaaaacgacttgcaaacgttggtacgctttattcagaga  9022400           --------->ANAC58     <-------TEIL                                --------->YAB1   --------->ARR14(2)                         <----------DOF2   --------->ARR11(1)                        ------>ZmHOX2a(2)   <---------GLK1(2)                        <---------YAB1   <---------ARR14(2)                      --------->ARR11(3) ----->CCA1(2)                             <---------ARR11(3) ---ZmHOX2a(2)                     --------->ANAC58                                           ------- ---->AGP1 --------->ANAC58        --------->ANAC58                                <---------GLK1(2) ---->ARR11(3)                 --------->At4g35610                              <---------AHL20(2) ----GLK1(1)              --------->DAG2------->MYC3         ----------->GT1  --------->CCA1(2) -----ARR11(3)           ---------->DOF2<-------MYC3         <---------MYB46(3) --------->AHL20(2) --->GLK1(1)          <---------ANAC46------->TEIL     --------->YAB1  ----------->HVH21     <-------TEIL   tccaagattcgtcaagaaaaacttgggtaaagcagcaacgcatgtgatctttgataatcgtagtggttattcaatgacagatataaattctctgattcat  9022500                                                             <---------TOE2(3)                                                             <---------TOE1(3)                                                            --------->MYB52(1)                                                         --------->TOE2(3)                                                    --------->DOF5.7(2)       --------->ANAC46                                               <---------ETT(2)               --------->ANAC58                                               --------->ETT(2)               --------->ANAC58                                               <---------WRKY12            ------>ZmHOX2a(2)                                               <---------WRKY38(1)       <---------ARR14(2)          --------->LBD16                      <---------DEAR3(1)        --------->ARR14(2)         <---------ANAC46             --------->ATHB12   --------->TOE1(3)<------ZmHOX2a(2)   --------->WOX13(1)            ------>ZmHOX2a(2) --------->TOE2(3)    <------ZmHOX2a(1) -->YAB1<---------LBD16    <----------DOF2    --------->ATERF1(1)   ---------->DOF2<---------YAB1   agcatcaatctccgtggaatccaaaacagctttgatccatccattggggtcgacgttaaacttaacgttctaaaggatccaagacatgataagataagtc  9022600                                                                                                 ----                                                                                                 ----                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                               <---------AtLEC2                                             <--------                        --------->ATHB51                                            <---------ATHB12                       <---------YAB1                  <---------O2             <---------WRKY38(1)                 ----------->GT1              <---------YAB1            --------->ZAT14     ---------                 <---------MYB46(3)           <---------TOE2(3)         <---------ZAT14  --------->ALFIN1                <---------AtMYB61        <------ZmHOX2a(1)  <---------ANAC46  <-----------HVH21  ----   atattatctctcactgcgatggtttattattgtgcaagaccgaggactatggtagactcgtggtttggaacccttgcactggtcaaatcaagtggatcca  9022700                                              ----------->RAV1(1)                                     --------->TOE2(3)                                    --------->ANAC55(2)         --------->TOE2(3)          --------->ANAC55(1)    --------->AHL20(2)              <---------ANAC55(2)    --------->YAB1                  --------->ANAC58   <---------ATHB51                 --------->ANAC58   <---------ATHB12                <-----------------------TaNAC69(2) --------->ARR11(3) ----->ANAC46                      <-------TEIL                       --------->ARR14(3) ----->ANAC58                     --------->CCA1(2)            <----------ID1 -ARR14(2)                       <---------ARR14(2)<---------ARR14(2) <---------ARR14(3) >ARR14(2)                       --------->ARR14(2)--------->ARR11(3) --------->GLK1(2)          <--- ----->ANAC58    ------->TEIL   <------ZmHOX2a(1)  --------->ARR14(2) <---------ARR11(3)       ------   agccaataatatgttaatggacgtttatgtgctaggatacgtaaacaacaacaaatcttgcaatagctacaaaatcttgaattttggcattcttccatta  9022800  Previous    Next  AGI:  At3g24700.1    Description:  F-box family protein. Identical to Putative F-box protein At3g24700 [Arabidopsis Thaliana] (GB:Q9LJ39); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G17265.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80717.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 9022288    to: 9023037    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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