Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         --------->ARR11(3)                                                         <---------ARR14(2)                                                         --------->ARR14(3)                                                         <-----------ARR10                                                         <---------ARR14(3)                                                         --------->GLK1(2)                                                         --------->ARR14(2)                                                         <---------ARR11(3)                                                        <------ZmHOX2a(1) --->KAN4(1)                                        --------->LBD16 ---YAB1<----------DOF2                            <-----------RAV1(2) --GLK1(2)                <---------ICU4       ---------->ARF1                 --------->YAB1   ttcaatgtttctttagatttcaatttcattaagacaattgaatcagcttgtccccagaggatcttatcggtgtaagaagaatcacaaaacctcgacgaag  8988000             <----------DOF2                                                             --------->ARR11(3)            ------>ZmHOX2a(2)                                                       <---------WOX13(1)          --------->ARR11(3)                                                     <---------YAB1          <---------ARR11(3)                                               <------MYB46(1)          --------->ARR14(2)                                   --------->WRKY38(1)--------->ATHB12          <---------AGP1                                <-----------RAV1(2)<---------MYB46(3)          <---------ARR14(2)                        <---------ANAC58       <------MYB83  <---------ARR11(3)         <---------CCA1(2)                          <---------ANAC46      <---------TOE2(2)  --------->DAG2                                    <---------ANAC58      <---------TOE1(2) ---------->DOF2 <---------TOE2(3)                 --------->MYB52(2)    <---------MYB52(1)       <--   tcataaagcttggatctttaagtttgactcgtttcatttctctctcttcttgttacttgcaggcgatgactcttcgttggtttttgattgaaatcttctt  8988100                                                                                      <------ZmHOX2a(1)                                ------>ZmHOX2a(1)                               <---------ZAT14                               --------->TOE2(3)  --------->ZAT14           --------->MYB59  <-------              ----------->RAV1(2)                 <---------ZAT14       <---------GLK1(2)    --------              --------->At4g35610                <----------DOF2        --------->ARR11(3)   -------- --------DOF2 <---------At4g35610   --------->AHL20(2)                  <---------ARR11(3)  <------ZmHOX2a(1)   cttttgagtttttctcatctgggtcttacatttcctaagtaaattcaaagactttactgggaatttttgagaaagattttggtacagaggaagaggaact  8988200                                                     ------->TEIL                                                   <---------ZAT14                              ----------->GT1      --------->ZAT18                     --------->AHL20(2)            --------->ZAT14          ---------->DOF2   <--------P             <---------ZAT18 --ARR14(2)          <---------AHL20(2)          <---------------AtSPL8 ->ARR14(2)     ------------>CBF                <---------ANAC46 ---------------->ANAC81  <---------MYB46(3)  <------------CBF                      <------------CBF   gaagaacaaaaacaaagcttcaattttttggttagtaatttgtgtttgtattgtgtacttagttctggtttcatgagaattttaaaaattgtatttttgt  8988300                                                                 --------->CCA1(2)                                                                 <------ZmHOX2a(2)                                                                <---------ARR11(3)                                                                --------->ARR11(3)                                                    <---------ALFIN1       <---------WRKY18(1)                   --------->AGP1                  <---------ZAT14         <-----------GT1        ----------->GT1                <---------HSFB2a(2)      --------->AGP1    <---------AHL20(2)           ------>ZmHOX2a(2) --------->ZAT14  ---------->DOF2               ---   --------->AHL20(2)   <---------TOE2(3)          --------->ZAT18------>ZmHOX2a(2) <-----------RAV1(1)   ttgtattaaatcgaaaattcagaactagggtttgatctgttcttgaagaaacctgcactgttttgagatctaaagtttgaccatttttgttgcagattaa  8988400                                     <------ZmHOX2a(2)                                    <---------ARR11(3)                          ==================HOX2a_HOX2a                      <------ZmHOX2a(2)                     --------->ARR11(3)                     <---------ARR11(3)           ----------->GT1<------ZmHOX2a(1)                      --------->ARR11(3)      ----------->HVH21<-----------RAV1(2)--------->YAB1  ------>ZmHOX2a(2)              <---------TOE2(3) --------->CBF     <---------YAB1   --------->ARR11(3)<---------YAB1          --------->ALFIN1   aacaatgcctgaagggaaattaagatcaggagtttatagatcattcataatgtgtgatgatccaagagatgttgttgaatgtggagctattaagaaacag  8988500                                                                                      <------ZmHOX2a(1)                                                                                 --------->ATERF1(1)                                                                                 <------NtERF2                                                                                ------>NtERF2                                                                               <---------PCF2                                                                               <---------RAP2.6(2)                                                                               <---------ANAC46                                                                              --------->ATERF1(1)                                                                              <------NtERF2                                                                              --------->RAP2.3(1)                                                                             <---------ERF1                                                                             <---------RAP2.3(1)                                                                             --------->ABI4(2)                                                                             ------>NtERF2                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                           <------NtERF2                                                                           <-------GAMYB                                                                           --------->ATERF1(1)                                                                           <---------ABI4(1)                                                                          <---------RAP2.3(1)                                                                          <---------ATERF1(1)                                                                          <---------MYB46(3)                                                                         <---------ANAC46                                                      ---------->DOF2    <---------DREB2C(2)              <---------------AtSPL8            ---------->DOF2          <---------RAP2.6(2)       --------->LBD16                  --------->ARR11(3)               <---------DEAR3(1)        <-      <---------ANAC46                  <---------ARR11(3)    <---------SPL7--------->ALFIN1       --   agtaagagccgtagtagtagtactaaacagagatgtgaagaacatctttcgaaagtgaaagagcggtccgaaatggcggtggcgcctaggaagagtagta  8988600             ------>ZmHOX2a(1)        --------->KAN4(2)       --------->HSFB2a(1)                  ---------->DOF2       <---------HSFB2a(1)              <---------ARR14(2)     <------ZmHOX2a(1)        <----------DOF2 --------ZAT14              <---------At4g35610                                                   <-- ------->ZAT14  ------>ZmHOX2a(1)       --------->ARR14(2)      <-----------RAV1(1)     <---------TOE2(3)   gtacagaggatgttcctccttcttcgttgcagcttttgagagtatccaaagggattcagaaattgaatgttgcaattgagtcattgtctaaaggttttag  8988700                                     =================HOX2a_HOX2a                                     ------>ZmHOX2a(2)                                    ==================HOX2a_HOX2a                                    <------ZmHOX2a(2)                                   <---------ARR11(3)                                   <---------AGP1                                   --------->ARR11(3)                                   --------->AGP1                                   --------->ARR14(2)                                   <---------ARR14(2)                                 ----------->ARR10                        --------->CCA1(2)                       --------->ARR11(3)                       --------->ARR14(2)         --------->ARR11(3)         <-----------HVH21     ---------->DOF2   <---------GLK1(1)       <------NtERF2  =====================HOX2a_HOX2a     <---------DEAR3(1)<---------ARR14(2)        --------->GLK1(1)    <---------ABI4(1) <------ZmHOX2a(1)        <------ZmHOX2a(1)     <----------DOF2               <- --------DOF2         ======================HOX2a_HOX2a--------->ATHB12                <---------ZAT6   ctttgaggcggtgtcaaggcctgaggatatagcgaaagatctgttgagaggagctcttgatttggaagagtctttagctatgttaagtagtattcaagaa  8988800                                                                            <-------TEIL                     --------->ARR11(1)                                    --------->ARR14(1)                    --------->ATHB12                                      <---------ARR14(2)                   <---------ATHB12                                       --------->ARR11(1)            --------->ARR14(2)                              <------ZmHOX2a(2)          --------->ARR14(2)            <---------ARR14(2)                             <---------ARR11(3)          <---------ARR14(2)        <---------At4g35610                            ---------->DOF2    <---------GLK1(2)        --------->At4g35610                     <---------RAP2.6(2)       --------->ARR14(2)        <---------LBD16<---------LBD16         <---------LBD16         <---------WOX13(1)     ------- --------YAB1      <---------YAB1           <----------DOF2--------->ARR11(3)      <---------At4g35610   gatgatagtaagcggaaaccgatgattcggaacgatggaagaagcgatttgcggtttcaaagatcgatgtctgatagattcggagagcggattgagaaac  8988900  Previous    Next  AGI:  At3g24630.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO65510.1) Range:  from: 8988405    to: 8990880    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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