Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                    --------->bZIP60(1)        <-----                                                                    <---------bZIP60(1)        ------                                                             --------->CCA1(2)                 ------                                                            <---------ARR14(2)                 ------                                                            <---------ARR11(3)                 <-----                 ---------->DOF2         ---------->DOF2    --------->ARR14(2)          --------->ZAT14           <---------ANAC58       ----------->GT1     --------->ANAC46                  <---------ZAT14      <---------ICU4             --------->DAG2       --------->ANAC58                  --------->At4g35610 -->AtMYB61<---------ANAC58     ---------->DOF2       --------->ANAC58       ---------->DOF2 --------   aaccctcatacttacttgcgaaagaagaaacttaaaaagtataaaaagaagattaccagcaagatttgtgatggcattggaaagagccagagcagaagat  8982400            <---------LBD16           --------->MYB52(1)          <---------ALFIN1          --------->DEAR3(1)         --------->MYB46(3)       --------->ANAC46   <---------------AGL15  <----------DOF2         <---------HSFB2a(2) <---------DAG2           --------->HSFB2a(2) ------>ANAC46            --------------->AGL15 ------>ANAC58      <---------ARR11(1) ------>ANAC58      --------->ARR11(3) ----TEIL<---------MYB55(2)      --------->ANAC58                                             <------MYB83 ---->CCA1(2)       --------->ARR14(2)                              <---------ARR14(2)       <------- ---->ARR14(1)      <---------ARR11(3)                              --------->ARR14(2)   --------->ATHB12 ----ARR11(3)       <---------ARR14(2)                              <---------ARR11(1)   <---------ICU4 --->ARR11(3)       <-----------ARR10                        --------->At4g35610   --------->ANAC55(2) --->ARR14(2)      <---------CCA1(2)                    --------->YAB1         <----------DOF2<------MYB46(1) --->ARR11(1) ----------->HVH21  --------->ANAC58    <----------DOF2<---------ARR11(3)  --------->ICU4 ----ARR14(2) --------->LBD16  ---------->DOF2------->TEIL <---------ICU4      <---------DAG2-------- --->ARR10--------->AtMYB61   --------->ANAC46--------->GLK1(2)    <---------CCA1(2)    <---------YAB1   acgcctttcccaccaccggacatatcttctccaagaagcaatttagcgaacctgtctttcatcatctccatatctgcaatactttatgtgattattaggt  8982500                                                                        ------>ZmHOX2a(1)                                                                      ----------->RAV1(2)                                                <----------DOF2  <----------DOF2                                               <---------ANAC58 ===============HOX2a_HOX2a                                               <---------ANAC58 ------>ZmHOX2a(2)                                           ----------->RAV1(2) ================HOX2a_HOX2a                                      <-------TEIL             <---------RVE1(1)             --------                                     --------->CCA1(2)        --------->ARR14(2)             --------                                    --------->ARR11(3)        <---------ARR11(3)             <-------                 --------->ATHB12   <---------ARR11(3)        <---------ARR14(2)            <--------                --------->ARR11(3)  --------->ARR14(2)        <---------AGP1                <--------      <---------TOE1(3)             <---------ARR14(2)        --------->AGP1 <------NtERF2  ---------      <---------TOE2(3) ---------->DOF2  <---------ALFIN1     --------->ARR11(3)          <---------GLK1(1) --TOE2(3)--------->CCA1(2)  ---------->DOF2   <---------ANAC46<------ZmHOX2a(2)          --------->GLK1(1) ->MYB59<------ZmHOX2a(1)--------->DAG2  --------->ANAC46    <---------CCA1(2)        ----------->GT1   tttttttgaaggatataagttattggaaaaggaaagaagatacacacctgcttgttgtctctcagatctttttcctggccgagtaagaggggaaatcatt  8982600                                <-----------HVH21                               ==============================RAV                               <-----------RAV1(1)                                         --------->ANAC58                             <---------ZAT2            -------------->OsCBT                --------->ANAC46                             --------->ZAT2            --------->ALFIN1       <---------GLK1(1)     --------->At4g35610    ------->TEIL       <-----------HVH21              <---------HSFB2a(1)     <---------At4g35610 --------->ANAC46     <----------DOF2                <---------ARR14(2) ->ATHB12          <----------DOF2           <---------ANAC58<---------ARR14(2)            --------->ANAC58 >ATHB1           <---------ANAC58  <------NtERF2    <---------ANAC58        --------->ARR14(2) --ICU4           <---------ANAC58--------->ETT(1)   <---------ANAC46        <-----------ARR10 -YAB1        --------->LBD16--------->At4g35610     <---------ANAC58        --------->GLK1(2) -ATHB12     --------->ANAC46<---------At4g35610 <-----------RAV1(2)        <---------GLK1(2) >ICU4      <---------LBD16 --------->GLK1(2)<---------ANAC58--------->ARR14(2)     <---------MYB52(1)   ggaaggctgctctctacggggctttctacgaagctgtcggagttttggctttcaggcgtgttggattcgacaatatgagaatctccgttctccacgacaa  8982700                                                        --------->ATHB12                                               <---------TOE1(3)                                    -                   <---------ANAC58            <---------TOE2(3)                                  <--                   <---------ANAC46       <----------DOF2                                    <-------                   <---------ANAC58 <---------ATHB12  <---------WOX13(1)     --------->TOE1(1)-------    <---------TOE2(3)          ------->TEIL   ---------->DOF2               ------>ZmHOX2a(1)--------   tagtttgagattgttgttgtttcgtcgaagatgaatcaaacattcttttaaagttgaatgatttggaagcgcttagtcctcgttccaacgctgcaaccat  8982800                                    ---------->DOF2                            --------->ANAC58       <---------HSFB2a(1)  --------->ANAC58 --------->ANAC58    <---------ANAC58 --------->ANAC58    <---------ANAC58      <---------DAG2                                           - -------->SPL7<---------TOE1(2) --------->ANAC58                           <---------YAB1      ------ -------SPL7 <---------ANAC58   --------->ANAC58                         --------->YAB1   --------->ARR11(3) --ATHB12 <-------TEIL      --------->ANAC46         ----------->TBP  ---------->DOF2     <---------ARR11(3) -->YAB1<---------SPL7     <---------LBD16 <----------DOF2    <---------At4g35610         <---------GLK1(2) ->MYB46(3)  <---------ANAC58--------->LBD16       <----------DOF2  ------>ZmHOX2a(2)   <---------TOE2(3)   ggtacgacaacgttcgcttgttttcttgccccgcaagttaaagccctttattcctttaaaatccagttgatctaaagatgatacaactctaagatttttg  8982900            <----------ID1                                              --------->MYB52(2)         ---------->DOF2                                              <---------MYB52(1)          ---    --------->YAB1                                                --------->MYB52(1)            <---- --------->DOF2               <----------DOF2                   --------->MYB46(3)      <------ZmHOX2a(1) ----->GT1<---------------AtSPL8<---------AHL20(2)              <---------MYB52(2)    <---------TOE2(3)   ttaaaagcataaaaagaacaaaaaaaaaacctcttttatttggaaaatgaaacaaaattcttaagaacaaacgtttgttttcgattttaaggactaaatg  8983000                                                          <---------ARR11(3)                                                          --------->ARR11(3)                                                      <---------MYB46(3)                                                      <------MYB83                                                    <---------WOX13(1)                                                   <------------CBF                            <-----                                                  --------->ATHB12                         <---------ANAC46                                                 <---------YAB1                           <<<<<<<<<<MYB80                                               <---------------AGL15               <------------CBF                   --------->WOX13(1)         ----------------->AG               --------->AHL20(2)               ----------->GT1                <-----------------AGL2             <---------AHL20(2)          --------->AHL20(2)                  ----------------->AGL3             <---------AHL20(1)      --------->YAB1  --------->YAB1  --------->MYB59 <------MYB46(1)           --------->AHL20(2) ---->TEIL<---------AHL20(2)    <------ZmHOX2a(1)--------->ICU4   <----------DOF2--------->AHL20(1) - ---TEIL----------->TBP       <---------TOE2(3)--------------->AGL15   <---------ZAT6    <---------MYB46(3)   catttcaaatataaaaatagtaaatcaaaatttaggaagttagctatttccatgattggttatcttctcttttgtgttagaaataaattgatggtttgtg  8983100                                                                              --------->YAB1                                                                        -------->P                                                                       <-----------GT1                                                                     <------ZmHOX2a(2)                                                                     --------->CCA1(2)                     --------->ANAC58                               --------->AGP1                     <---------ANAC55(2)                            --------->ARR14(2)                     --------->ANAC58                               <---------ARR14(2)                    <---------LBD16                                 --------->ARR14(3)       <---------ANAC58                                             <---------ARR14(3)       <---------bZIP60(2)                                          <---------ARR11(3)       <---------ANAC58  ---------->DOF2                            --------->ARR11(3) --------->DAG2   <---------SPL7  --------->AHL20(2)               --------->GLK1(1) ----YAB1     --------->ANAC46    --------->YAB1                   <---------GLK1(1)            <---- --------->DOF2 <---------------AtSPL3                 <----------DOF2------>ZmHOX2a(2)        <-----   ataaaagtgacgttccacgaagtacggaaaagacaataaaactccaaactgattcaactttcttatgggagatctaccattcatcaaatagagtatttag  8983200         <---------ANAC58          <---------ANAC58                                 <---------ALFIN1         <---------ANAC46          <---------ANAC46                                --------->MYB46(3)         <---------ANAC58     <----------DOF2                                      <---------MYB55(2)   ------>ZmHOX2a(1)<---------ANAC58                                              -------->P        -  --------->TOE2(3) <---------ANAC58            <---------AHL20(2)                >>>>>>>>>>>>>>>>>LFY -----At4g35610   <-----------GT1  <---------ANAC58        <---------AtMYB61     --------->WOX13(1)<- ------GT1    <------------------------ANAC81   <-----------GT1         <----------DOF2   <---------ZAT18   ctatccttatgtcttgcatttttcttgttctgcttttgagtgtttagaatttacttaagttttggtttatttggctttgaaatcaaccactgtgcaattg  8983300  Previous    Next  AGI:  At3g24620.1    Description:  ATROPGEF8/ROPGEF8 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/. similar to ATROPGEF9/ROPGEF9 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT4G13240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45889.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 8980702    to: 8982800    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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