Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------AHL20(2)                                --------->AHL20(2)                               <---------AHL20(1)                               --------->AHL20(1)      <---------ICU4           <---------AHL20(2)                                    ----------------    --------->GLK1(2)          --------->AHL20(2)                             ---------->DOF2   --------->YAB1           --------->YAB1                                  --------->ANAC58  <---------KAN4(1)   ----------->GT1       <---------REM1(1)           --------->ANAC58 ------>GT1 --------------->AGL15      --------->TOE2(3)   <------ZmHOX2a(1)--------->ANAC58     ---- ----TOE2(3)<---------------AGL15   <-----------GT1--------->ATHB12     --------->ANAC58    ---------   gtgaataatctttgctatatatgtaagtaaaaataaaattaccttgatgtagacgattggaggagaagattgagaagcaccaaagagaacagaacaaaga  8974500                                                                                              -------                                                                                        --------->SPL7                                                                                      <---------SPL7                                                                                     --------->TOE1(1)                                                                                     --------->TOE2(1)                                                                                  ===================                                                                                  ------>ZmHOX2a(2)                                                                                  ===================                                                                                 ====================                                                                                 ====================                                                                                 <------ZmHOX2a(2)                                                                                --------->ARR14(2)                                                                                --------->ARR11(3)                                                                                <---------GLK1(2)                                                                                <---------ARR14(3)         --------->ANAC58                                                       <---------ARR14(2)      --------->ARR14(2)                                                        <---------ARR11(3)      <---------ARR14(2)                                                    ---------->DOF2--------->ORA47(1)      <---------GLK1(2)                                                 ------>ZmHOX2a(1)--------->DEAR3(2)      <---------ARR11(3)                       <<<<<<<<<<<<<<<<<LFY     =================HOX2a_HOX2a      --------->ARR11(3)                     <---------MYB52(2)         ================HOX2a_HOX2a    ----------->ARR10                       --------->ANAC58     <-------GAMYB----------->ARR10  ---------->DOF2     --------->REM1(1)     --------->ANAC55(1) <-----------RAV1(1) ------>ZmHOX2a(1) -------->ANAC81      --------->MYB46(3)    --------->ANAC46  ------>ZmHOX2a(1) --------->ARR14(3) ------->GT1  <-----------RAV1(1)           --------->ANAC58  ===========================HOX2a_HOX2a ->DOF2  --------->ANAC58 ------->GAMYB  <---------REM1(2)    ==========================HOX2a_HOX2a <   agaaaaaagatactcaatgtcgcaacaactcccaaaataagtctacaagtaacaatggagactcctctgttgtcctcataaagatcctcgtaccgtccat  8974600                                                                               ------>NtERF2                                                                              --------->DEAR3(1)                                                                              --------->DREB2C(2)                                                                              --------->RAP2.6(2)                                                                              --------->ANAC46                                                                             --------->MYB46(3)                                                                           --------->DEAR3(1)                                                                           <---------ALFIN1                                                                          --------->MYB46(3)                                                                          <---------MYB55(2)                                                                          <---------ABI4(2)                                                                         ------>NtERF2                                                                         <---------ATERF1(1)                        ------>NtERF2                                   --------->DEAR3(1)                       --------->RAP2.6(2)                              <---------ALFIN1                     <------NtERF2 <------NtERF2                       --------->ERF1                     --------->ATERF1(1)                             ------->GAMYB                   --------->DEAR3(1)                                --------->ANAC58                   <---------ATERF1(2)                               --------->DEAR3(1)                   --------->RAP2.6(2)                               --------->ANAC58                   --------->ATERF1(2)                               --------->RAP2.6(2)                  --------->ATERF1(1)--------->LBD16                 --------->ANAC46           ------>ZmHOX2a(1)      --------->LBD16                   --------->MYB46(3)        ------>ZmHOX2a(1)         ------>NtERF2                   --------->ARR14(2)     ------>MYB83--------->ZAT2 <---------LBD16                   <---------ARR14(2)             ----     ------>MYB46(1)------>NtERF2--------->ANAC46                <---------ARR14(2)              ----   --------->AtMYB61<---------ATERF1(1) <---------ARR11(3)       --------->ARR14(2)     --------->GLK1(1) -->WOX13(1)     <---------At4g35610 --------->At5g28300       --------->LBD16------->GAMYB<---------LBD16 ==============HOX2a_HOX2a  <---------CCA1(2)                <---------LBD16--------->ABI4(1) ------- =================HOX2a_HOX2a--------->ARR14(2)    <-----------HVH21--------->DEAR3(2) <---------ARR14(2) ==============HOX2a_HOX2a--------->AtMYB61       --------->DEAR3(1)<------------AtMYB77<---------GLK1(1) =================HOX2a_HOX2a<---------ARR14(2) ------>ZmHOX2a(1)---------->DOF2       --------->ARR14(2) ---------ALFIN1 --------->At4g35610<---------ANAC46       <---------ALFIN1--------->AtMYB61 --------   caccaccttcctccttatcagccggccaccatatcccgccgtgatatttcctccgtcccttccaccggaaaccgccaccaccgccattggatacccggct  8974700                   ------>NtERF2                  --------->DEAR3(1)                 <------NtERF2                                                   ----------->HVH21                 --------->ATERF1(1)                                            <-------MYC3                 --------->RAP2.3(1)                                            ------->MYC3                <---------RAP2.3(1)                                            <---------O2                <---------ATERF1(1)                                            --------->bZIP60(1)                ------>NtERF2                                                  =====================bZIP_DOF               <---------ANAC46                                                --------->O2               <---------RAP2.6(2)                                             <---------ANAC55(2)               --------->ATERF1(2)                                             <---------ANAC46            ----------->HVH21                                                  --------->ANAC55(2)           <-----------HVH21                                                   --------->bZIP60(2)          --------->ALFIN1                                                     --------->TGA1a        <---------ANAC58                                                       <---------TGA1a       <---------MYB46(3)                                                    <-------------DYT1    --------->ATHB12 --------->GLK1(2)                                       ------------->DYT1 ----->ANAC58  <---------RAP2.3(3)                           <------ZmHOX2a(1) <---------bZIP60(1) ----->ANAC58  <---------DEAR3(1)<---------MYB46(3)      --------->DEAR3(1)<-----------HVH21    ----- -->ZAT2<---------ANAC46        <---------AtMYB61       <------NtERF2    <------NtERF2        ------- ->LBD16<---------ANAC58<-----------RAV1(1)            ------>NtERF2   --------->ETT(1)  <----------DOF2   agcaattgatgggtgtgacggcgactctgtgggagtggtttgatgagtagtcagtgccaccgaggaagacttgtcggagtcacgtgatgggctttgaacg  8974800                                        --------->O2                                        --------->TGA1a                                        --------->TGA2(1)                                        <---------ANAC58                                        <---------TGA2(1)                                        --------->bZIP60(1)                                        <---------bZIP60(2)    <---------ARR11(3)                                        <---------bZIP60(1)    --------->ARR11(3)                                        <---------TGA1a       --------->REM1(1)                                        <---------O2<---------GLK1(2)                                        <---------ANAC46     ----------->ARR10                                       ----------->STF1      <-------TEIL                                 <---------ANAC46   <---------ARR14(2)                                 <---------ANAC58   --------->ARR11(3)                         <------MYB46(1)<---------ANAC58  <---------ANAC58                     --------->ATHB12 <---------TGA2(2)   <---------ANAC58    ----------->GT1  ------                    <---------YAB1   ----------->HVH21   <---------------AtSPL8       <----------DOF2 ---->TOE1(2) <---------AtMYB61  <---------ANAC58 ----------->ARR10     <---------AHL20(2) <--------- >TEIL <------ZmHOX2a(1) <------MYB83----------->TGA1    --------------->AtSPL8      <---------ICU4<-   tagtaagtaggacgttttggtgatgataggtcgaggcttgtgacgtctgagtcagattttgggtacatcttcattttttttggttaatcttttctttacc  8974900                                                                                <------MYB83                                                                                <---------ANAC58                                                                                <------MYB46(1)                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                               <------MYB83                                                                               <------MYB46(1)                                                                               --------->MYB59                                                                               <---------MYB46(3)                                                                             <--------P                                                                           <------MYB46(1)                                                                          --------->MYB46(2)                                                                          --------->MYB52(2)                                                                          --------->MYB59                                            <----------ID1                --------->MYB111(1)   <---------MYB46(3)            <---------ANAC58            <---------ICU4<------MYB83 ---------->DOF2 ------>CBF <---------At4g35610  <---------ANAC58           --------->ICU4<---------AtMYB61 -DOF2      <---------ZAT18      <---------ANAC46       --------->ZAT18  <---------MYB55(1) --------ATHB12       <------------CBF <---------AtLEC2 <---------ZAT18 <---------MYB52(1)        <--   aatgtttgttcttgtgctcataaatattggtatttgtgtgtgcatggggacaaaatagggaactaattacaagcgttaggttgggtaagacaaaggccca  8975000      ----------->HVH21    --------->At4g35610    <---------ANAC55(2)    --------->ANAC55(2)    <---------At4g35610    <------MYB46(1)    <------MYB83 --------->ZAT6       <-------TEIL   --------->MYB111(1)             <-------GAMYB   --------->MYB52(2)          ------------>AtMYB77   --------->MYB46(2)          <-----------HVH21   --------->MYB111(2)      <---------ANAC46    <---------TOE1(2)   <---------AtMYB61        <---------ANAC58--------------->AtSPL3   --------->MYB59          <---------ANAC58<---------------AtSPL8 <---------MYB52(1)       <---------ANAC46  <---------------AtSPL3 -------TOE2(2)<-----------HVH21  --------->MYB52(2)  ------------>CBF            ------->GAMYB  <---   taggttaggtgaccatttgtcactagttttgggtgtcagttacatagtagtacgttctcaattctgcaagtttgacatttgtaaccgaaaaatttgagtc  8975100                <---------ZAT6          <---------MYB46(3)        <---------WOX13(1)              ----------->GT1       <------------CBF                --------->DAG2                                 ---------->DOF2      --------->ATHB12                ---------->DOF2                          <----------DOF2     <---------AHL20(2)         <---------ANAC46                           <-------TEIL           <--     <---------YAB1             <---------ANAC58                          --------->ARR14(1)      <-- <----------DOF2----------->GT1 <---------ANAC58                         <---------GLK1(2)       <--- -------DOF2<--------P        <---------ANAC46---------->DOF2          ----------->ARR10       <-----   tttctttttaattggttagtgtaaatacgatgttgtgtggaaaagtaaaaaagaattagaaatgtgaagaagttagattcgttttaagtaaagctagctt  8975200                                  --------->AHL20(1)                                  --------->ARR11(3)                --------->ANAC55(2)                                    <----------DOF2 -------ANAC58  <---------ANAC55(2)           ----------->GT1       --------------->AGL15 -------ANAC58--------->AHL20(2)  <---------ARR11(3)            ----------->HVH21 ------AtMYB61<-----------GT1     <---------AHL20(1)          --------->ANAC55(2) -----DOF2 <---------ICU4        <---------AHL20(2)           <---------ANAC55(2)                   <   tggtgcttcttcttaattacatactacaattctaaatattttcacattgagtaaaacaataaacaagtgactgcttttagcaagagaaacatactgccta  8975300                        --------->YAB1                                     --------->TOE2(3)                       <---------ATHB12                                   --------->YAB1             --------->ARR11(3)               ---------->DOF2--------->TOE2(3)             <---------ARR11(3)            --------->YAB1  --------->ARR11(3)       <---------ANAC55(1)             --------->ZAT6      <---------ARR11(3) ---------YAB1 ------>ZmHOX2a(2)---------->DOF2            --------->GLK1(2)                     <---   ctatgaattaagtgtgatcttataaatcatacttaaaagtaacacttataaagtataagaaaatctaaattttcaaacatcaacagggatagaatacaag  8975400  Previous    Next  AGI:  At3g24600.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65514.1); contains InterPro domain MHC class I, alpha chain, C-terminal; (InterPro:IPR010579); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 8972202    to: 8974874    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g24610.1    Description:  kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At3g24610 [Arabidopsis Thaliana] (GB:Q9LV41); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G14288.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 8975373    to: 8978109    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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