Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <------------CBF                                    ----------->TBP     --------->ATHB12                            <---------WRKY12          --------->ARR11(3)  --------->YAB1         <----------DOF2    <---------WRKY38(1)  ------------>CBF        --------->MYB46(3)       <--   <---------ICU4        ------->GAMYB        --------->At4g35610        <---------ATHB12 ------>NtERF2   <-----------GT1      --------->MYB46(3)    <-------GAMYB             ------>MYB46(1)  --------->LBD16 -----------GT1        <<<<<<<<<<<<WRKY18    <---------MYB46(3)    <-----------GT1      <---------RAP2.6(2) --------AHL20(2)    <---------WRKY38(1) --------->DAG2<---------YAB1  --------->WOX13(1)------>NtERF2 --->AHL20(2)        <---------WRKY12  ---------->DOF2<---------ARR11(3)------>MYB83   <---------LBD16 ----AHL20(2) <-----------GT1  --------->ZAT6<-----------RAV1(1)<----------DOF2     <----------DOF2   tttaatcacttctttttttcgagtcaacagtcaacactacaaaaaggctgttgcaatatcattgggcttttaccaatcaacattttctttccggcccatt  8968800                <---------AHL20(2)                --------->AHL20(2)                             <---------ARR14(2)               <---------AHL20(1)                     <---------WRKY12               --------->AHL20(2)                  ----------->GT1                                  <           <---------YAB1                 ----------->GT1      --------->ARR14(2)       <---------AHL20(2)    <-----------GT1           <-----------RAV1(1) --------->MYB59           <-----------GT1   <------ZmHOX2a(1) -------TOE2(3)<---------AHL20(2)  <---------TOE2(3)<-----------HVH21      <-----------GT1  <--------   aacatttaacattctaatttaatttgttttttgtgttgacgatgaagaaaattgggtcaaatgagaaacctctcattttaacctctctattttttaggat  8968900                                             --------->GLK1(2)                                            <---------GLK1(1)                                       <------NtERF2                                    ------>NtERF2                                    <---------LBD16                                    <------NtERF2                                   <---------RAP2.3(1)                                   <---------RRTF1(1)                                  <---------DEAR3(1)                                  <---------RAP2.6(2)                                  <---------RRTF1(3)                                  <---------RRTF1(2)                                  <---------RAP2.3(2)                                  <---------RAP2.3(3)                                               -                                  <---------ANAC46                ----------->GT1                   -                                 <---------LBD16                 --------->DAG2                ------      --------->LBD16         <---------ANAC58           ---------->DOF2                       <----- <-----------GT1        --------->ANAC46    --------->GLK1(1)  ---------->DOF2            <----------DOF2 -----------GT1    --------->ARR14(2)<---------ANAC46 --------->YAB1                <----------DOF2 < -TOE2(3)    <-----------GT1  <---------ANAC58<---------------------WRI1         <-----------GT1   <-   tttaaacccccaaaatttccctatacactctatcttgcggcggaagaaatctgtaatcacaaaggaaaaggttaatagttttttttctttctctttttta  8969000                        <----------DOF2                     <---------ARR14(2)                     ------->TEIL                     --------->ARR14(2)                     --------->GLK1(2)            --------->bZIP60(1)            --------->ETT(2)<---------ANAC46            <---------bZIP60(1)           ---------->ID1  ---------->ID1 -------->ARR11(3)   <-----------ARR10 -------->AHL20(1)   <---------ARR11(1) --->AHL20(2)<-----------TGA1     <---------TOE2(3)    <---------TOE2(3) ----AHL20(2)<-----------HVH21    <---------TOE1(3)    <---------TOE1(3) --------->YAB1 ---------AHL20(1)  <---------CCA1(2)             --------->REM1(1)      <---------ICU4 --------AHL20(2)   <---------ARR14(1)  <---------At4g35610 ---------->DOF2                         <   aatattttgttttgtcgtcatcgaatcttttcgtttagggttatctgatgttacatcaaggttaaagaaaaccgataatcacagaagcatatagaaatcg  8969100                                                <---------YAB1                  <---------YAB1              --------->YAB1                                       <-                --------->YAB1               <------ZmHOX2a(2)                                    <--               <------ZmHOX2a(2)           --------->YAB1                                  <---------ATHB12        <-------TEIL                       ------->GAMYB                  <---------ARR11(3)<--------    <---------TOE1(3)                     --------->MYB46(3)              --------->ARR11(3)---------    <---------------AtSPL8        <---------ANAC55(2)             ----------->TGA1         <---------YAB1 XXXXXXXXXXXXXXXXXXXXMIR861-3P    --------->ANAC46            ------------>CBF             --------->ICU4   tttttgaaggtacatcgatcatcgttgagacttactacgttacaacgatcatcgttgagacttaaacaatgacgaagatgtctaatctccctaatgattt  8969200                                           --------->TOE1(2)                              <---------ARR11(3)     <---------ANAC58     --------->ALFIN1         --------->ARR11(3)     <---------ANAC58 <------NtERF2             <---------DOF5.7(2)       <---------ANAC46   <---------DAG2 --------ANAC46          --------->DOF5.7(2) --------->SPL7             <----------DOF2 -------LBD16          <---------ANAC46    --------->TOE2(2) --------->ATHB12              <--------- -ICU4   --------->ZAT18--------->TOE2(3)--------->HSFC1(2) <---------YAB1       --------->DAG2 >ATHB12 <---------ZAT18--------->TOE1(3)<---------HSFC1(2) --------->ICU4     ---------->DOF2   ggcggaagaggtgctctctagggtttcgttaacatctctgagaaacgtccgacttacttgtaaagattggaatactttatctaaaggtgagagctttgca  8969300                                                                                                  <--                              --------->At4g35610                                                ----                           --------->At4g35610               <---------YAB1                     -----                       --------->YAB1                        --------->ICU4                  <-------                 --------->ANAC46                         --------->ICU4 <---------TOE1(3)  <--------                 --------->ANAC58                 --------->YAB1         <---------TOE2(3)  <--------                 --------->ANAC58                <---------YAB1 <---------WOX13(1)          <-------- -DOF2          --------->WOX13(1)     ---------->DOF2    ------>ZmHOX2a(1)       <---------AHL20(2)   aagaatcaccttggttatcaagcaatagtagcagcgaaggaaaaagagtttatgatggtcctgatgatggattttagggtttatttgattcgagtcaacg  8969400     --------->YAB1  <---------ICU4 -----TEIL ----->DOF5.7(2) ---->TOE1(3)                                       <---------DEAR3(1) --DOF5.7(2)                                  <---------ANAC58                           ----------->GT1 -WRKY38(1)    <---------ANAC58               <---------ANAC58               <----------DOF2 -------- -WRKY45       <---------ANAC58      <---------At4g35610           ------->TEIL  <---------At5g28300 -WRKY12       <---------ANAC46      --------->At4g35610          <---------CCA1(2)  ----------->HVH21   ttcacaatgacattgagtcgtgtattaagcctgaaggtgagcttattagcttgggcgatgaagtcgatgtatctcaagtctttcactgcgacggtttatt  8969500                <---------DOF5.7(2)                --------->MYB52(1)        --------->ANAC55(2)                                                             <---------ICU4        --------->ANAC58                --------->MYB52(2)                             <---------AHL20(2)        --------->ANAC55(1)         <---------MYB46(3)                                 <---------ATHB51        --------->ANAC46        <---------AtMYB61           <------NtERF2              --------->AHL20(2)        <---------ANAC55(2)     <---------TOE1(3)          ------>NtERF2   ------>ZmHOX2a(2)        --------->ANAC58   --------->ZAT6            --------->ARR14(2)  <---------ARR14(2)    ------       <---------LBD16   --------->MYB52(1)          <---------ARR14(2)<---------MYB46(3)     <------      --------->MYB52(1) <---------DOF5.7(2)      <---------ANAC55(2) --------->ALFIN1 <---------ATHB12    <-----------HVH21  --------->ARR11(3)<----------DOF2 <---------ANAC46--------->ARR14(2)   ------- ->ATHB12     --------->ARR11(3)<---------TOE2(3) --------->ANAC55(2)--------->At5g28300--------->AHL20(2)   gctatgcatcacggaagataacgaagataacgctaaggtcgttctttggaacccgtattgggggcaaacacggtggatcgagtctacaaataatttccac  8969600                                                               --------->ARR14(3)                                                               <---------ARR14(3)                                                       <---------At4g35610                                                       --------->ZAT2                                                       <---------ZAT2                                                       --------->At4g35610                                                     <------NtERF2                                                    --------->LBD16                                                   --------->DEAR3(1)                                                   --------->RAP2.6(2)                           --------->CCA1(2)    --------->ANAC58                          --------->ARR14(2)    --------->ANAC46             <---------ANAC55(2)                --------->ANAC58          --------->ATHB12 --->LBD16   --------->ANAC55(2)              ---------->DOF2  --------->GLK1(2) -----------AGL1          <---------ARR14(2) <---------ATHB12  --------->ARR11(3) -------->AGL15       <---------LBD16--------->At4g35610       <---------ARR11(3)        <---------ALFIN1   aaattggacatgtatacgtatgctctcggatacaagaagagcagcaaatcaagccgcagctacaaaatcttgagatttattgatttttctcccacttgtt  8969700  Previous    Next  AGI:  At3g24580.1    Description:  F-box family protein. Identical to Putative F-box protein At3g24580 [Arabidopsis Thaliana] (GB:Q9LV45); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G19470.2); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G19470.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 8969169    to: 8970305    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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