Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ------>ZmHOX2a(1)                 <-------TEIL                <---------WOX13(1)                   <---------HSFB2a(2)           <---------AHL20(2)            --------->ATHB12                   <---------HSFC1(1)           --------->AHL20(2)            <---------YAB1             ------>ZmHOX2a(1)  -------->ATHB1  <---------AHL20(2)          <---------AtLEC2    <-----------GT1--------->HSFC1(1)         --------->TOE2(3)     <---------AHL20(2)          ----- <---------AHL20(2)--------->HSFB2a(2)      <---------YAB1       <---------ARR11(3) <---------GLK1(2)   tattttatactggtcctagtcctagaaaatcgaattattcagtgttttcattaaatgcatagttcaacatattatttggcatgatagattgtctgcaaat  8959900                                                                  ------>ZmHOX2a(1)                                                              <---------ARR14(2)                                        ----------->GT1<---------AHL20(2)                           -                                       --------->DAG2 --------->AHL20(1)                    ---------                                 <---------------AGL15<---------AHL20(1)                    ---------       <----------DOF2           --------------->AGL15<---------AHL20(2)              --------->AHL20(2)       <---------DAG2      ---------->DOF2    <----------DOF2 --------->ARR14(2)      <---------AHL20(2) --------->ANAC46         --------->AHL20(2)  --------->TOE2(3)  --------->TOE2(3)  <----------DOF2 < --------->bZIP60(2)   --------->YAB1 ---------->DOF2 --------->AHL20(2)        ---------->ID1    --- ------>HVH21<----------DOF2     ====================================================================   gacacatcacttttcctttctgcaaaaataaaagactctataaagtaactttagaatttattcagttcctcaactcgatctagtccctttaattaagcaa  8960000          <-----------GT1    <---------ICU4    --------->AHL20(2)    <---------AHL20(2)    --------->ATHB51   --------->ICU4   <---------YAB1 <---------ICU4 -------->ICU4    <----------DOF2            <<<<<<<<<<WRKY38 >ANAC58<---------AHL20(2)          ---------->ID1                       <-----------GT1 >ANAC58--------->AHL20(2)         <-----------GT1 <-----------GT1   <---------YAB1 ---------YAB1  --------------->AGL15        <<<<<<<<<<WRKY43  --------->AHL20(2)     --------->YAB1 ------>YAB1    <---------------AGL15   <----------DOF2        <---------AHL20(2)     --------->AHL20(2) ===============================MADS_MADS    <<<<<<<<<<WRKY26 --------->AHL20(2)   --------->WOX13(1)   acataattatttaaacaactcttttgagaaaacattttttctctttggtcaaataacaaaacaaattaattcttatttctacattcaattaaaaacatac  8960100                                                               <---------TOE2(2)                              <---------------AGL15            <---------TOE1(2)                              --------------->AGL15         <---------ANAC46                      --------->ARR11(3)                    <---------ANAC55(2)                      <---------ARR11(3)                   ------>NtERF2                  --------->YAB1                      --------->AHL20(1)                  <---------ANAC46          <---------ANAC46                      <---------AHL20(1)               --------->ANAC46             ----------->GT1                     <---------AHL20(2)                --------->ANAC58           <---------ANAC46          <-----------GT1<---------AHL20(2)            --------->ANAC58  <-----------RAV1(1)      ---   caaaacatctattaacttcttaaatattttttctcaaatttgtagtccaaaaaaaacacgacgcgtatgttttttttgttgttgttgtgtaataagaaga  8960200                           ------->TEIL                  <---------ANAC46               ----------->HVH21        ---------->DOF2    <---------ARR14(2)                                    --------->YAB1     --------->TOE2(3) --------->SPL7                            *TSS        ------>ZmHOX2a(1)    --------->ANAC58  ------>NtERF2                    ------------>CBF     --------->TOE2(3)    ----------->GT1<---------LBD16                   <----------DOF2        <---------ANAC58    --------->ANAC58 --------->DEAR3(1)    ---------->DOF2     <------------CBF <---------YAB1 ------->DOF2<------------CBF  <---------ZAT6      --------->At4g35610      <---------ANAC58   ------   gaaagaacgtaaaagaattgacgcggacgaatcgtgttagacccaaaaagaacagctttcaattccattgtccaaattccttatcaaaaaaaaactctac  8960300             --------->ZAT14             =================HOX2a_HOX2a             ==============HOX2a_HOX2a             <------ZmHOX2a(2)             =============================HOX2a_HOX2a        <---------At4g35610            <----------DOF2        <------NtERF2                  <---------DAG2       ----------->RAV1(1)          -------->P <---------GLK1(2)       ------>NtERF2                ------>MYB83     <------NtERF2                  ------>MYB46(1)    <---------ATERF1(1)            ------>ZmHOX2a(1)                                   --------->GLK1(2)    --------->ABI4(2)  ------>ZmHOX2a(1)    <-----------GT1                           <---------GLK1(2)    ------>NtERF2   ------>ZmHOX2a(1) <---------DAG2     <<<<<<<<<TBF1        ---------->DOF2   ----- --->ZAT14  <---------ARR11(3) XXXXXXXXXXXXXXXXXXXX>MIR838  <<<<<<<<<TBF1 ---------->DOF2 <----------DOF2   tctcggtggcaccagatcactcctcctctctcttctcctacctttttcacattctcttcttcttcttctcgtgagaaaaagaaagagagattctttattc  8960400                            <---------ATERF1(1)                            ------>NtERF2                           --------->RAP2.3(3)                           --------->RAP2.3(2)                           --------->DEAR3(1)                          --------->RAP2.3(1)                          --------->DEAR4(2)                          <------NtERF2                          --------->ORA47(2)                          --------->ATERF1(1)                                                    ----                         <---------ATERF1(1)                                            --------->AtMYB61                         ------>NtERF2                                                  <---------ALFIN1                     ---------->CDC5                                                   --------->MYB46(3)                     --------->ANAC46                                 ----------->RAV1(1)     ------>ZmHOX2a(1)                  <---------ETT(2)                                 ------>ZmHOX2a(1) --------->AtMYB61                  --------->ETT(2)                             --------->ARR14(2)    ------->GAMYB       --------->ANAC58  <---------ZAT18                     <-----------HVH21      --------->MYB46(3)       --------->ANAC58 --------->DEAR3(1)                  --------->DEAR3(1)      <---------MYB55(2) ---->ATHB12      --------->ZAT18       <---------ALFIN1 <---------ALFIN1        --------->MYB46(3)   attagatcgaagcaaaaatgtccacagcgccgtctccaggcactactccatcaccatctccaccgtctcctcccacaaactcgacaaccaccactcctcc  8960500                                                        <---------WRKY12                                                       <------NtERF2                                                       <---------MYB52(1)                                                       --------->DOF5.7(2)                                                      <-----------HVH21                                                      ------>NtERF2                                                     --------->DEAR3(1)                                                     --------->RAP2.3(3)                                                    <------NtERF2                                                    --------->RAP2.3(1)                                                    --------->ATERF1(1)                                                   <---------RAP2.3(1)                                                   <---------ATERF1(1)                           <---------ALFIN1        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        --------->AtMYB61          ------>NtERF2                        <---------ALFIN1          <---------DEAR3(1)                       --------->MYB46(3)        --------->ATERF1(1)                     <---------ALFIN1           <-----------HVH21                         <---------DAG2 <---------ZAT2      --------->ANAC46           <---------ATERF1(1)           ------>ZmHOX2a(1) --------->ZAT2   ------>ZmHOX2a(1)            --------->ANAC46              <---------ALFIN1 <---------At4g35610--------->MYB46(3)       ------>ZmHOX2a(1)             ------>ZmHOX2a(1)       -- --------->At4g35610<---------MYB55(2)    ------>ZmHOX2a(1)       <-----------GT1------>ZmHOX2a(1) == -->ZmHOX2a(1) ------>ZmHOX2a(1) ------>ZmHOX2a(1)--------->DEAR3(1) --------->AtMYB61    <----------DOF2   tccagcagcctcttctcctcctcccaccacaactccttcttctcctcctccgtcgccgtcaactaattcaacctctcctcctccttcttctcctttacct  8960600                                <-----------GT1                            ====================HOX2a_HOX2a                            ==========================HOX2a_HOX2a                            ------>ZmHOX2a(2)                          --------->ARR11(3)                          <---------AGP1                          <---------ARR14(2)                          <---------ARR11(3)                          --------->ARR14(2)                       ------>ZmHOX2a(1)                       --------->HSFB2a(2)                       --------->LBD16                       <---------HSFB2a(2)                                                       <---                     ----------->RAV1(2) ------>ZmHOX2a(1)                                     ------                    ===============HOX2a_HOX2a                 <---------At4g35610             <-----             <---------ALFIN1<----------DOF2          ------>MYB46(1)                         -------           ------>ZmHOX2a(1)=================HOX2a_HOX2a      <---------ALFIN1       --------->DEAR3(1)           ========================HOX2a_HOX2a        ------>MYB83     <---------ALFIN1     ---------        ===========================HOX2a_HOX2a      --------->AtMYB61 <---------ATHB12      <--------        ------>ZmHOX2a(1)<---------CCA1(2)     ------>ZmHOX2a(1)     <-----------HVH21     --------->MYB46(3) ---->ZmHOX2a(1)    ------>ZmHOX2a(1) ------>ZmHOX2a(1)    <---------ALFIN1  ------>ZmHOX2a(1)------- ==================================HOX2a_HOX2a--------->TOE2(3)--------->At4g35610<---------ALFIN1   ccttctcttcctcctccatctcctcctggatctttaactcctcctcttcctcaaccttccccctccgctcccatcactccttctccaccgtctcccacca  8960700                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                              <---------ALFIN1        <<<<<<<ZML2              ------                                            ------>MYB46(1)        ------>ZmHOX2a(1)           ------                                            ------>MYB83   <------ZmHOX2a(2)                   ------                                          <---------MYB111(2)      --------->HSFB2a(2)         ------                                          <---------MYB46(2)       <---------HSFB2a(2)         ------                                          --------->AtMYB61===============HOX2a_HOX2a          ------                                          --------->MYB46(3)       --------->HSFC1(1)          ------                                          <---------MYB55(2)------>ZmHOX2a(2)                  <-----                                          <---------MYB111(1)      <---------HSFC1(1)         <------                                         --------->ANAC46 <---------ARR14(2)                  ------>NtERF2                                       --------->AtMYB61  --------->ARR14(2)                  <------                                    <------ZmHOX2a(1)     --------->ARR11(3)                 <------- ------ALFIN1                       ===============================HOX2a_HOX2a               -------- --->AtMYB61                        ==============================HOX2a_HOX2a               --------- ----ALFIN1                     --------->TOE2(2)         <---------ARR11(3)               <--------- -->MYB46(3)                    --------->TOE1(2)         <-----------ARR10           <---------ZAT14 >ANAC46             <---------ALFIN1 --------->MYB46(3) <------ZmHOX2a(1)          --------->ANAC46- -ALFIN1--------->TOE1(2)      --------->MYB46(3)     <-----------RAV1(2)         --------->ZAT6----- -->ANAC46  ---------->DOF2 ------>ZmHOX2a(1) --------->ZAT6==============HOX2a_HOX2a --------->ZAT14   caccctcaaaccctcgaagccctccatctcctaaccaaggaccaccaaacactccctcaggatctactcctagaactccatcaaacactaaaccgtcgcc  8960800  Previous    Next  AGI:  At3g24550.1    Description:  ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G18470.1); similar to receptor protein kinase PERK1 [Brassica napus] (GB:AAK21965.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 8960265    to: 8963575    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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