Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                            <-------TEIL                           --                                                    <---------YAB1                              -----                                                 <---------DAG2                             ------->TEIL                                                 <---------------AGL15                      ---------              ---------->DOF2                    <----------DOF2  <-------TEIL        ===============             --------->YAB1                      --------------->AGL15    ---------->DOF2   <-------- ------->At4g35610                              <-----------------AGL3<---------ARR14(2) <---------YAB1 --------At4g35610                              <---------ANAC58<-------MYC3          <------ZmHOX2a(2) ---TEIL    <---------ATHB12            ---------->DOF2   <---------GLK1(2)          <---------ARR11(3) -YAB1 --------->YAB1       ------->GAMYB       <---------ANAC58------->MYC3         --------->ARR11(3)   catctgcaatactaatcaaagtcaatacaacacacatttcaataaagtttgctttttatagattcacatgcatatacaaagcttgaagatcatgaatcct  8947500     <-------TEIL    --------->CCA1(2)    --------->GLK1(2)                                                            --------->ANAC46   <---------GLK1(2)                                                            --------->MYB52(1)   --------->ARR14(2)                                                           ------>MYB46(1)   <---------ARR14(2)                                                           ------>MYB83 ----------->ARR10                                                            --------->MYB46(3) --------ETT(2)                                             --------->At4g35610--------->MYB55(1)  -- ------->ETT(2)                                             <---------At4g35610<---------ALFIN1   --- ->ZmHOX2a(1)                                   --------->GLK1(2)             <---------MYB55(2)  --- >ARR14(2)                                     --------->ARR14(2)   --------->YAB1                --- ==HOX2a_HOX2a                                 <---------ARR14(2)   --------->TOE2(3)             <-- -ARR14(2)               ---------->DOF2       <---------GLK1(2)    >>>>>>>>>RAP2.2              <---   gtcgagattcgaaatcagaccctatctaaaagttcaaattttgcatccagattccaaaattcagctacaatctaaatcgacccaccgaatcaaacacatc  8947600                                  --------->CCA1(2)          <-------TEIL           --------->ARR14(2)    --------->YAB1               --------->ARR11(1) ------->LBD16                   <---------ARR14(2)         --------->ATHB12 ------>ANAC55(2)                <---------ARR11(3)        <-------TEIL ------>LBD16                  ----------->ARR10        <---------ANAC58 ------>ANAC46        ---------->DOF2                   <---------ANAC58                            - -------ANAC55(2) ---------->DOF2--------->ARR11(3)     <---------ANAC46          <----------DOF2   - ------LBD16  <-------TEIL     --------->ICU4  <---------LBD16             <------ZmHOX2a(1)      ---   ccggaatcaaaatgcatacataaagaaagagtcaagatttggacattacgacgggattgcgttcattgagaagagaaggattgtctttaagaagtctctg  8947700                                                                 ------>NtERF2                                                                 <---------ZAT18                                                                --------->DEAR3(1)                                                               --------->ATERF1(1)                                                      <---------GLK1(1)                                                      --------->GLK1(1)                                                      <------ZmHOX2a(2)                                                     --------->ARR14(2)                                                     <---------AGP1 --------->ANAC46                                                     <---------ARR14(2)                                                     --------->ARR11(3)                                                     <---------ARR11(3)                      <---------ZAT14                <-----------ARR10                <-------TEIL               --------->LBD16                      <---------ARR14(1) <---------ALFIN1              --------->DEAR3(1)           <------MYB83       <---------At4g35610  <---------DEAR3(2)           ------>ZmHOX2a(2)              --------->MYB55(2)  --------->At4g35610  <---------MYB46(3)          <------ZmHOX2a(2)               <---------MYB46(3)  <---------ATERF1(1) <---------DEAR3(1)         --------->ARR11(3)              --------->ALFIN1    --------->DEAR3(1)   <---------DREB2C(2)         <---------ARR11(3)              <---------ANAC46  <---------At4g35610    --------->ETT(1)      --------->YAB1  <---------ZAT18  <---------MYB46(3)  <---------ZAT2        ---------->ID1 -------->ANAC58      --------->ZAT18 <---------AtMYB61------>ZmHOX2a(2)    <---------MYB52(1) -------->ANAC58<------NtERF2----------->GT1        <---------CCA1(2) --------->MYB46(3) ------->DOF2<---------LBD16 --------->YAB1<------MYB46(1) --------->At4g35610 <-----------RAV1(1) <<   taaagcaataagatcgccggagagagcacaatcgtgaattgtggtgggtctagcggatctcagccgctgccctccaccgttttgtcggttcatttctctt  8947800                                                                         --------->GLK1(2)                                                                         --------->ARR14(1)                                                             <----------DOF2          --------->ARR14(2)                                                           <---------------AGL15      --------->ARR11(3)                                                           --------------->AGL15      <---------ARR14(2)                                                   <-----------ARR10    --------->ARR11(3)                                                --------->AtMYB61       <---------ARR11(3)                        <----------ID1          <---------MYB111(1)     --------->ARR14(2)        ---         ------>ZmHOX2a(1)                     --------->ANAC46         <---------ARR14(2)   --------        --------->TOE1(3)            <----------DOF2     <-----------------AG        <------ZmHOX2a(1)        --------->TOE2(3)       --------->ARR11(3)------>MYB46(1)       <---------GLK1(2)   <-------- <<<<<<<TBF1 --------->MYB46(3) <---------ARR11(3)------>MYB83        ----------->ARR10    <---------LBD16   cttcttcaatcctcaacaacaacaagaagacgaagaactcttttcttccaccaaatctaatctcttttgggaaagattctctcgagaggattttgcggag  8947900                                                                               <---------CCA1(2)                                             *TSS  ------>ZmHOX2a(1)           <------NtERF2                                          --------->LBD16                    <---------ANAC46                                          ------>NtERF2            <----------DOF2    <----------DOF2   --------->ZAT6                        <---------ALFIN1<-----------TGA1    <---------ANAC58 ------>GLK1(2)                         <---------LBD16 <---------ANAC58     <---------ANAC58 ->LBD16                            <-----------ARR10<----------DOF2        ---------->ID1 -ANAC46                        <---------------AtSPL3  <---------ANAC58<----------DOF2   aatcaacactatcgaagaaatagattagagaatgagagtacctccgcgtcttcctctttcgtcactagtcttttctttggcgtctcttctttcttcatgg  8948000                             <---------DAG2                             <----------DOF2                         ----------->HVH21                        <---------MYB59                 --------->ATERF1(1)      <-------GAMYB                       ----------->RAV1(2)              <------NtERF2            <---------ANAC58                      -------->P                      <---------ANAC58           <---------ANAC58                      ------>MYB46(1)                 <---------ANAC46       <----------DOF2                      ------>MYB83                    <---------ANAC58<---------At4g35610           -                      --------->MYB52(1)           ------>ZmHOX2a(1)  --------->At4g35610      <-----                <-----------GT1                   <---------LBD16     <---------ZAT2       --------->ATHB51                <---------At5g28300              ----------->RAV1(2)  --------->ZAT2       <---------ICU4               <-----------GT1                <----------DOF2 ------>ZmHOX2a(1) <---------MYB46(3)<--    ---------->DOF2  <---------ALFIN1      <-----------GT1   --------->TOE2(3) <---------AtMYB61-----   tatttgaaaagactaatttacccctacctgactttttatgtttttttactttcctggcgtcttcctaaacccagctaagctttggttgccccattatttc  8948100           <---------ATHB12         ------>MYB46(1)         ------>MYB83       --------->TOE2(3)                 <---------YAB1                       --------->AHL20(2)       <---------MYB59 <---------ICU4   <---------AHL20(2)         <----------DOF2    <-----------GT1   <---------YAB1    --------->AHL20(1)         <---------DAG2   <---------YAB1---  <---------WOX13(1)--------->YAB1      <---------AHL20(1)    <---------MYB52(2) --------->AHL20(2) -------->ATHB12    <---------ICU4     --------->YAB1         <---------MYB59--------->AHL20(2)  ---- ----AHL20(2)    --------->YAB1        --------->AHL20(2)     <------------MYB.PH3(2)--------->YAB1 -------WOX13(1)<---------AHL20(2) <---------YAB1             <---------MYB46(2) <---------AHL20(2) ---->ATHB12--------->YAB1       <-----------GT1     <-----------GT1     --------->AHL20(2)      ----   attgattaacctaatcatataatcactattacaaattacaattatatttctcatttcactcttaactaacttttttaaaataaaaaattatagctacggc  8948200       --------->TOE1(3)       --------------->AGL15       --------->TOE2(3)    --------->RVE1(1)    <-----------GT1    --------->CCA1(1) ------>At5g28300              --------->TOE2(3)<----------DOF2    --------->YAB1 ----->RAP2.6(2) <---------AHL20(2)          <---------ARR11(3)   <---------YAB1  <---------YAB1 ------->GT1    --------->AHL20(2)           --------->ARR11(3) --------->YAB1------->TEIL    -------   cgtaaaataccttatagattaaatgagaagtattcttaaaatttcattatcttttttaaaacaaaattatcatgttgatgtatcatttttggagaaattt  8948300                      --------->ICU4            --------->YAB1            <---------ICU4                                             --------->WOX13(1)           <---------AHL20(2)                                        --------->AHL20(2)           --------->AHL20(2)                                    --------->AHL20(2)           <---------ATHB51           --------->AHL20(2)         <---------AHL20(2)  <------ZmHOX2a(1)       --------->AHL20(2)             <---------AHL20(2)<---------ZAT6<---------AHL20(2)       <---------AHL20(2)     --------->ZAT18       --------->ICU4   <---------AHL20(2)   --------->ANAC58 -->ICU4   --------->ICU4     <---------ZAT18       <---------MYB52(1)--------->AHL20(2)  --------->ANAC58   ttagtctatttaaataattatctaatttttagtagactatttaaaaacttggccattagtgttatatataaataaatcaaacatataggaaaacgaaatt  8948400  Previous    Next  AGI:  At3g24530.1    Description:  AAA-type ATPase family protein / ankyrin repeat family protein. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G19150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65524.1); similar to unknown [Picea sitchensis] (GB:ABK25136.1); similar to Os02g0266300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046505.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain CbxX/CfqX; (InterPro:IPR000641); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 8945432    to: 8947945    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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