Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ANAC55(2)                           --------->ARR14(2)       --------->ATHB12                                   <---------ARR14(2)       --------->YAB1                                     ------->TEIL       <---------ICU4                                     --------->GLK1(2)      <---------ATHB12                             <------ZmHOX2a(1)      --------->ICU4                              --------->ANAC58    ------>MYB46(1)                               --------->ANAC46    ------>MYB83                                  --------->ANAC58  <---------MYB111(1)                       --------->ANAC58  --------->At4g35610  <---------MYB59                           --------->ANAC58  <---------At4g35610 ----->At4g35610                       <---------REM1(2)  <-----------ARR10 ------At4g35610                     ------>ZmHOX2a(2) --------->ANAC58 -->At4g35610                        =====================HOX2a_HOX2a           --------->GLK1(2) ---->RAV1(2)--------->TOE2(3)     --------->ARR11(3)  --------->ANAC58        <---------GLK1(2) ---At4g35610<---------MYB59       <---------ARR11(3)  --------->ANAC46       <---------At4g35610   gctaccaaatcattacctaaatcaaactgataagtatgatctacacaggcacaggacacgaatctgctcatgaaaatttcagattccaaatacaatctct  8928900                                                                              --------->GLK1(2)<-----                                                              ----------->GT1 ------->TEIL     ------                                   <---------YAB1--------->ANAC58             <---------ARR14(2)   -- --------->YAB1                  --------->YAB1  --------->ANAC58             --------->ARR14(2)   <-   caagtatatttgtgacttaatttcaaatttctgtatcaaaattgacattacaagcacagtagcaatgtgaaatttcgacgaatctgtatgcaattttcta  8929000                                                                                         ----------->RAV1(2)                                                                                       --------->AtMYB61                                                                                       --------->DEAR3(1)                                                           --------->At4g35610        --------->MYB46(3)                                                           <---------At4g35610       ------>NtERF2           ---------->DOF2                               --------->ZAT18            --------->RAP2.6(2)        --------->ANAC58                                 <---------ZAT18            --------->ANAC46        --------->ANAC58                            --------->O2                   --------->MYB46(3) <------ZmHOX2a(1)                                  <---------O2          <------ZmHOX2a(1) ----HSFB2a(2)                     --------->GLK1(1)<---------TGA1a      --------->At4g35610 --->HSFB2a(2)           <---------TOE2(3)          --------->TGA1a      <---------At4g35610 ------->ANAC46         --------->MYB52(1)       <----------ID1        <-----------RAV1(2)      <---- --------TOE2(3)      <---------MYB52(2)    <------ZmHOX2a(1)         ------>ZmHOX2a(1)<---------ALFIN1   taaggaatcgaagcaaagagagagactaacgatagggaaatcgagaggattgcgacgagtgagcttctcttcctcaggagccatagccaccacctgtaac  8929100                --------------------->WRI1               <---------ANAC46            <---------ANAC46                                   <--------P            <---------RAP2.6(2)                              --------->ATHB12   ----------->GT1    <-           <---------LBD16                             --------->ANAC58         <----------ID1     --        <---------ANAC58                  ---------->DOF2    <---------MYB46(3)----------->GT1     --        <---------ANAC58             <---------DEAR3(1)--------->ANAC58       ----------->GT1      <-   <---------ANAC58           --------->WRKY38(1) --------->ANAC58         ---------->DOF2      <----   <---------ANAC58           --------->WRKY12    --------->ANAC58    <---------HSFB2a(2)       <---- --------MYB.PH3(1)  <---------------------WRI1--------->ZAT18 <---------WOX13(1)           ---------   tgcttccttgtcttgcggcttagagcgaagcgttgaacggcgatgaaagagcacgagaagccatggttgattcgagagaaaggggaaaaaatagacggag  8929200                                                      --------->ATERF1(1)                                                   <------NtERF2                                                   --------->RAP2.3(1)                                                  <---------ORA47(2)                                                  ------>NtERF2                                                  <---------ERF1                                                  <---------DEAR4(2)                                                  <---------ATERF1(1)                                                 <---------DEAR3(1)                                                 <---------RRTF1(3)              <------NtERF2                                                 <---------RAP2.3(3)            ------>NtERF2                                                 --------->DEAR3(1)             <-----------HVH21                                                 <---------ANAC46              <---------bZIP60(1)                                                 <---------RAP2.3(2)           --------->bZIP60(1)                                                <---------ABI4(1)              --------->bZIP60(2)                                               <---------ATERF1(1)            --------->RAP2.3(1)                                      <---------O2<---------RAP2.3(1)        <---------RAP2.3(1)                              <------NtERF2   --------->O2        <---------ARR14(2)                             --------->LBD16  --------->TGA1a     --------->ARR14(2) --------At4g35610          <---------ANAC46  <---------O2  --------->ATERF1(1)<---------ANAC46 ------->At4g35610          <---------ANAC58  <---------TGA1a  ----------------->AGL1          <----- ------->ZAT2               <---------ANAC58  <---------DEAR3(1) <---------RAP2.6(3)      <---------ALFIN1 --------ZAT2              <---------LBD16    --------->ANAC46------>NtERF2 <---------DEAR3(1) ------ -----ZAT2           <---------ARR11(3)       =====================================bZIP_DOF  -------- -----At4g35610      --------->ARR11(3) --------->ALFIN1   <---------ATERF1(1)<------NtERF2------>NtERF2 >ANAC46           <---------YAB1   <---------ZAT14--------->ATERF1(1)  ---------->DOF2   --------->DEAR3(1)   cagctctgtttaacgacgatgaagatagtggcggagagagaagtggccacggcggcgaaggcgatgccgatatagaaagcggcgtcatagctccgcctcg  8929300                        --------->LBD16                       <---------ANAC55(2)               <---------ARR14(2)               --------->ARR14(2)              ------>ZmHOX2a(1)                                            ------------>CBF        <---------HSFB2a(1)                                                <---------YAB1        --------->HSFC1(2)                                                <-----------GT1        --------->HSFB2a(1)                                        --------->YAB1        <---------HSFC1(2)                            <----------DOF2 <---------ICU4             <---        <---------MYB46(3)                     <----------DOF2  --------->WOX13(1)       <---------TOE2(3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         <---------AHL20(2) <---------AHL20(2)   <---------AHL20(2) ----ANAC46   <---------CCA1(2)     *TSS    <-----------GT1    --------->AHL20(2)  <---------AHL20(2) --->O2<---------TOE1(2)<-----------HVH21<---------AHL20(2)   --------->AHL20(2)<---------AHL20(2) ------------->WRI1    <---------ANAC46<---------AHL20(2) --------->AHL20(2)    --------->AHL20(2)  <   tgttcttcgatggttcctatctgttccgtcaaacagttcatattattttctttatacttttaaaataaatcaaaattatcaattttttatttatgttatt  8929400                                                  --------->AHL20(2)                                                  <---------AHL20(1)                                                  --------->AHL20(1)                                                  <---------AHL20(2)                                                 --------->AHL20(2)                                             --------->AHL20(2)                                             --------->AHL20(1)                                        --------->AHL20(1)                                        <---------AHL20(2)                                        --------->AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)                                   --------->AHL20(2)                                   <---------AHL20(2)                                   --------->AHL20(1)                               <---------YAB1<---------AHL20(2)  <---------GLK1(1)                             --------->YAB1 --------->AHL20(2)   --------->GLK1(1)                            <---------YAB1  <---------AHL20(2)<---------TOE2(3)            <---------AHL20(2) ------AHL20(2)  <----------DOF2   <---------AHL20(1)   <---------TOE2(3)               --------->AHL20(2) ---------YAB1<---------AHL20(2)--------->YAB1   <---------AHL20(2)              --------->YAB1   ttataattcattccatttactttagacattcttataataaattaaattaaattaaatttagattaagaaatctgaaacccgaatcaaaatttttatattg  8929500                                  ----------->GT1                                 <---------TOE2(3)                                 --------->MYB59                           ------->TEIL                                 <---------TOE1(3)                        <---------GLK1(2)        --                            --------->AHL20(1)                      --------->LBD16       --------->AHL20(1)                            <---------AHL20(1)                     <---------RAP2.6(2)    <---------AHL20(1)                            --------->AHL20(2)     --------->ARR14(2)     <---------CCA1(2)      ----                           ==========================================================================                           <---------------AGL15   <---------ARR14(2)------>NtERF2        <---------ARR11(3)                           <---------AHL20(2)<---------ARR14(2)   ------>ZmHOX2a(2)       --------->ARR11(3)   <---------YAB1      --------->AHL20(2)    --------->ARR14(2)   <---------LBD16      --------->AHL20(2)   aatatatgatacaaaattttgagttttaaatattttaggtaaattcgaatccaaatccaaaaacttgatccggcctgaatctcaagtcttaaaatattca  8929600                                         --------->At4g35610                                      <---------KAN4(1)                              ------>MYB46(1)                              ------>MYB83                              ============================RAV                              ----------->RAV1(1)      ------>MYB83                             --------->ANAC46          ------>MYB46(1)                            <---------MYB59          --------->MYB46(3)                            --------->MYB46(3)=====================RAV                 <---------ARR14(2)   --------->KAN4(1)----------->RAV1(1)             ----------------->AG --------->ANAC58  --------->ANAC58       <---------AHL20(2)  --------->ANAC58   --------->At4g35610       --------->AHL20(2)  --------->ANAC46   ----------->RAV1(2)   <---------DAG2--------->GLK1(2)--------->ANAC58  --------->ANAC58                <---------AHL20(2)   <----------DOF2         --------->ANAC58----------->HVH21         --------->ARR14(2) ------->MYB46(3)--------->ARR14(2)  <---------KAN4(2)--------->ANAC46          ----------->GT1 ----->ANAC46----------------->AGL1 --------->YAB1 ------->TEIL      <---------ARR14(2)    <---------TOE2(3) ==============================MADS_MADS--------->GLK1(2)       ----------->GT1 ------>ZmHOX2a(1)<---   aaccactttttaatttccaaatctgaaatacccaacacgaataatctgacctgaacccaacacaaatagtgaatactcactcctgttaaatttgatgtta  8929700                                                        <---------AHL20(2)                                                       <---------AHL20(1)                                                       --------->AHL20(1)                                                       --------->AHL20(2)                                                       <---------ARR11(3)                                                    --------->AHL20(2)                                                   <---------AHL20(2)                                               --------->AHL20(2)                                               <---------AHL20(2)                                   <---------RAP2.6(3) --------->ARR11(3)                       -----                                  --------->RAP2.6(2)  <---------AHL20(2)      ----------->GT1 ------                         <---------AHL20(2)  <----------DOF2            ----------->GT1    <---------AHL20(2)      --------->ALFIN1  <---------AHL20(2)<---------ARR11(3)        <-----------GT1        --------->AHL20(2) ------YAB1         <---------AHL20(2)    --------->ARR11(3)      --------->AHL20(2)<---------YAB1   tttttgaagtgtttgtttgcattttttttatttaagccgtctaaaatctttaaataatatatttgaaatttaacatgaaaaatgttattctaaaaaaatg  8929800  Previous    Next  AGI:  At3g24506.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17240.1); similar to unknown [Populus trichocarpa] (GB:ABK93895.1) Range:  from: 8928176    to: 8929336    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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