Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------AHL20(2)                                                  <-------TEIL                                               --------->GLK1(1)                                              <---------ARR11(3)  ------>MYB46(1)                             --------->ARR14(2)    ------>MYB46(1)  ------>MYB83                                <---------ARR14(2)    ------>MYB83 ----------->RAV1(1)                        --------->LBD16         --------->ANAC58        <-------- -------->AtMYB61                         <---------LBD16           --------->ANAC58   <---------AHL20(2) ---P   <-------TEIL                 <---------ZAT14   --------->AHL20(2)             --------->AHL20(2) -RAV1(2)                            --------->ZAT14  --------->AHL20(2)              <---------AHL20(2)   gaccaacaaattcatgtgttttatagtggaacatgtttctgtactccggatattcatttattttcataccaagctaaatttttgtttattaattttgatt  8922700                   --------->MYB46(3)                                                    --------->CCA1(2)        <---------ATHB12                                                                --------->AHL20(1)       --------->ANAC58                                                                 --------->ARR11(3)       --------->ANAC46                                                                --------->AHL20(2)     <---------ALFIN1                                     ----------------->AG     <---------AHL20(2) -YAB1 --------->ANAC58          --------->ANAC46         ----------------->AGL1   --------->AHL20(2)   ttttggaccactcaatactcatccatcgactattcacacaaaaaaaaaaaaaaaaaacttgccaaatgtgttcttggctattgatataaatatatgggtt  8922800                                                       <----------DOF2                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                     <---------RVE1(1)                                                    <---------ARR11(3)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                    --------->ARR11(3)                                                    --------->GLK1(2)                    <---------ICU4                 <------ZmHOX2a(1)                   --------->ICU4                <---------TOE2(3)         <---------DOF5.7(2)               <------ZmHOX2a(1)     ----------------->AGL1               <---------WRKY38(1)             <---------TOE2(3)     <<<<<<<ZML2   <---------TOE1(3)        <---------WRKY45          -        <---------ARR14(2)<---------HSFB2a(2) <---------MYB52(1)          <---------WRKY12         <-        --------->ARR14(2)--------->HSFB2a(2) --------->DOF5.7(2)    ---------->DOF2             <---       <------ZmHOX2a(1) <---------ETT(2)    --------->TOE2(3)   <---------ZAT6        ----------->GT1   tagagaataggatttgaggaaattatgtcgagaactagaaccaaaatcgttaaggatcttttttttggtgttaaagtcaacgtttgaaattgtgaaatta  8922900                                                                                                    -                                                                                                  <--                                                                                          <---------MYB52(1)                                                                                          --------->At5g28300                                   ---------->DOF2                       <------MYB83  <---------LBD16                                ----------->RAV1(2)        <---------MYB52(1)        ------>ZmHOX2a(2)             ----------->GT1   --------->GLK1(2)          <-------GAMYB  ----------->GT1 --------->LBD16           --------->ZAT14     ------->TEIL               <---------At4g35610       <---------GLK1(1)   ---------->DOF2            --------->ARR11(3)         <---------MYB46(3)        <---------ARR11(3) ---------->GT1           ---------->DOF2       <---------ATHB12         <------MYB46(1) ----------->GT1 -----ZmHOX2a(1)       --------->ANAC58       --------->WOX13(1)  ---------->DOF2  --------->ARR11(3) ------TOE2(3)         --------->ANAC58  --------->At4g35610      ===================================   aggagtaaagaagtgaagtaaaaacaagaaaagaacctgaagcagcatcaatgaactggccgttgatgaaaagcttggtgaatttgatctccggtaactt  8923000             <---------MYB52(1)            <-------GAMYB          <------NtERF2   --------->TGA1a   <---------O2                       <<<<<<<<<<GT-3b   =================MYC_MYB       --------->AHL20(2)   --------->O2                   <---------AHL20(2)   <---------TGA1a               --------->AHL20(2)   ==================================================bZIP_DOF   <---------ANAC46      <---------MYB52(1) <-----------HVH21      <---------RAP2.6(3) -------->DEAR3(1)     <---------ANAC58   --------------------->WRI1 -------At5g28300      <---------ANAC58<-----------GT1                            <------ZmHOX2a(1) ============bZIP_DOF<---------At5g28300  <----------DOF2     <----------DOF2   *TSS               --   caccgtcgtggctccgttgcatttgccgttctccatttatttttctttgtatttctctctctctctttctctatgctcgtagaaggacagagaggttatc  8923100                                                                                    --------->REM1(2)                                                                                  <-------PIF4                                                                                  <-------MYC3                                                                                  <-------MYC2                                                                                  ------->MYC3                                                                                  <-------PIF5                                                                                  ------->PIF5                                    ---------->DOF2                               ------->MYC4                                  --------->At4g35610                             <-------MYC4                               --------->TGA2(2)                                  ------->MYC2                              <-----------HVH21                                   ------->PIF4                              <-----------TGA1                                   --------->TGA1a                             --------->ANAC55(1)                                 --------->ANAC58                             --------->O2                                        --------->ANAC46                             ==================bZIP_DOF                          <---------TGA1a                             --------->ANAC58                                  <------------OsbHLH66                             --------->ANAC46                                --------->AtLEC2 -------                             <---------O2                                  <---------AtLEC2   <------                             --------->ANAC58                          <---------ANAC46       <------                             <---------TGA1a                           <---------ANAC58       <------     --------->AHL20(2)      --------->bZIP60(2)                       <---------ANAC58       <------     <---------AHL20(2)      --------->TGA1a                        <------ZmHOX2a(1)         <------   <-----------TBP         <---------ALFIN1                    --------->STY1(2) --------->ANAC58  ------->TEIL--------->HSFC1(2)  <---------At4g35610   <---------MYB52(1)<-------TEIL xxxxxxxxxxxxxx ------->ANAC55(2)       <-----------GT1   <---------At4g35610 <---------STY1(2)------->TEIL <-------   tacgtatttatatcgaagtgtctcgattcacacgtcagcaaaggcagtggatttttctgttaagtagctaggagcgtgcatgcacgtgaagagattacgg  8923200                                                            <-------MYC3                                                            ------->MYC3 -->ANAC55(2)                                              --------->TGA1a                      <---- ---ANAC58                             <---------AHL20(2)  <---------TGA1a                 <---------AHL20(2) ---ANAC55(1)                          --------->AHL20(2)  --------->O2                    --------->AHL20(2) ---ANAC46                         <---------AHL20(2)      ====================bZIP_DOF   <---------AHL20(1) ---ANAC58                    =======================================bZIP_DOF             --------->AHL20(2) ---ANAC55(2)                 <----------DOF2       <---------ANAC58                      --------->AHL20(1) xx>smallRNA(s)     <---------YAB1 --------->AHL20(2)      <---------O2         ----------->GT1------ --LBD16  <-------TEIL        --------------->AGL15 <---------ANAC58---------->DOF2       <---------AHL20(2)   gttctactccgatacatctcttattgttgtttcttttttaattaaaccgagttttcttgccacgtttgatcaaagttgcgaaatgtaaaaaataaaatta  8923300                                                              <---------ARR14(2)                                                          --------->LBD16     <---------ARR14(2)                                                          ------>NtERF2       ------->TEIL                                                         --------->ANAC58     --------->ARR14(2)                                                         --------->ANAC58  <---------ANAC55(2)                                                        --------->MYB46(3) --------->ANAC55(2)                                                     <-----------GT1  <---------YAB1               <-                                                    --------->WRKY38(1)--------->YAB1             <-- --------->TOE1(2)                                  ----------->HVH21 <---------ATHB12       <------- --------->TOE2(2)                 <---------ARR11(3)<---------WRKY18(1)--------->TOE2(2) ---------->ID1 -----AHL20(2)                    --------->REM1(1)<---------WOX13(1)<-----------HVH21   <-----------GT1 --->AHL20(2)        <---------AtLEC2       --------->MYB52(1)--------->ARR14(2)     <----------DOF2<   aaacgtatgagaaaaatcgatttgtatgaaaattctacatcttaaaaaacgggattgacccgcctatcccctatcatacgtatatgtcttttatcgtttt  8923400                                   <---------YAB1                                <---------DAG2                                       <---------YAB1                                <----------DOF2                                   --------->ARR14(2)                             <-----------GT1                                      ------->TEIL     --------->AHL20(2)   --------->YAB1                                       --------->ANAC55(2) --------->YAB1           <---------ICU4                                       <---------ANAC55(1) ----------GT1           <---------AHL20(2)        <-------GAMYB               <---------ANAC55(2) ---------GT1        --------->AHL20(2)           <---------ANAC46             <---------ANAC46 --MYB52(1)          <---------AHL20(2)        <-----------RAV1(1)  <---------------AtSPL8 ---------YAB1      --------->AHL20(2)   <---------ZAT6       --------->AHL20(2)  <---------ARR14(2)-   ttatcattttaaaaatgttcaatttaaataataacttttcattgtgttaatgtcgttgaaaattttaaatctggtactaatacgtatatgatttttctac  8923500                               <---------ANAC55(2)                             --------->AHL20(2)                         --------->AHL20(1)                         <---------AHL20(1)                         --------->AHL20(2)                         <---------AHL20(2)                        --------->AHL20(2)                                        ---------->DOF2                        <---------AHL20(2)                                      <---------AHL20(2)                       <---------YAB1                                   <-----------GT1                     -------->ATHB1            ------>ZmHOX2a(1)   --------->ARR11(3)                     <---------ICU4           --------->TOE2(3)    --------->ARR14(2)                    --------->AHL20(2)    --------->KAN4(2)        <---------ARR11(3)         -------                    <---------AHL20(2)   <---------KAN4(1)         <---------GLK1(2)<---------------AtSPL8 <---------AHL20(2) <---------ATHB51     --------->KAN4(1)         --------->ARR14(3)        -------- -------->AHL20(2)  --------->ICU4       <----------TaMYB80        <---------ARR14(3) <----------ID1   tataaaatttacagaaatacaaattattaaattacatataagtatattcctaagtaatccaagtttcaagattttcacatattaaaaaggaacaaataaa  8923600  Previous    Next  AGI:  At3g24503.1    Description:  ALDH2C4 (REDUCED EPIDERMAL FLUORESCENCE1); 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD). Identical to Aldehyde dehydrogenase 2C4, cytosolic (ALDH2C4) [Arabidopsis Thaliana] (GB:Q56YU0;GB:Q9LV57); similar to ALDH2B4 (ALDEHYDE DEHYDROGENASE 2), 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) [Arabidopsis thaliana] (TAIR:AT3G48000.1); similar to aldehyde dehydrogenase [Crocus sativus] (GB:CAD70567.1); similar to cytosolic aldehyde dehydrogenase [Leymus chinensis] (GB:ABO93608.1); similar to cytosolic aldehyde dehydrogenase RF2C [Zea mays] (GB:AAL99608.1); contains InterPro domain Aldehyde/histidinol dehy Range:  from: 8919567    to: 8923080    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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