Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ANAC55(2)                                                                 <---------ANAC55(2)                                                                 --------->ANAC46                                                         ---------->DOF2                             --------->AHL20(2)        <---------AHL20(2)                        ----                             <---------AHL20(2)        --------->AHL20(2)             --------->DAG2   --------->CCA1(2)     <----------DOF2           <---------AHL20(2)                ---------->DOF2 ------->At5g28300       <---------DAG2            --------->AHL20(2)         <---------TOE2(3)------   ccgtgatatgaaaaataaaacttagccctttttaatttttgaacttattcagattaattaaaagcatacgtagcatatttaagaatataaagcagagaat  8910400                                                                        ------>MYB46(1)                                                                        ------>MYB83                                                                       --------->ANAC46                                                                      --------->MYB46(3)                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)                                                            --------->ARR14(3)                                                            <---------ARR14(3)                                                            --------->ARR14(2)                                                            --------->ARR11(3)                                                            <---------ARR14(2)                                                            <-----------ARR10                                                            <---------ARR11(3)                                                            --------->AGP1                       ----                                                            <---------AGP1--------->AtMYB61      <---                       --------->ANAC58                    <---------CCA1(2)          --------->At4g35610      --------->ARR11(3)                      <---------ARR14(2)     --------->DEAR3(2)      <------- ----->YAB1            --------->ANAC58       --------->ARR14(2)    --------->PCF2    <---------At4g35610 --->GLK1(2)          ------>NtERF2      <------ZmHOX2a(2)----------->ARR10  ---------->DOF2 --------   caaaataacatattgtttcaatggcacccattttagctagtcgatcagtaactgcattcgcagatcttcgaacccaccaaaaatcgacagcttcaaatcc  8910500                                                                                      <---------At4g35610                                                                                   ---------->DOF2                                                                                  --------->AtMYB61                                                                                 --------->ANAC58                             <---------YAB1                                      --------->ANAC58                            --------->AHL20(1)                              --------->ANAC46         ----------->TGA1 <---------ARR11(3)                                --------->At1g77200      --------->ICU4      --------->AHL20(2)                                ------->GAMYB -->ZmHOX2a(1)            --------->AHL20(1)                               --------->DEAR3(2) -------DOF2              <---------AHL20(1)                               --------->MYB46(3) --ARR14(2)        ----------->GT1                   <-----------GT1     --------->MYB52(1)      <--- ->ARR14(2)     ---------->DOF2            <-----------HVH21     --------->YAB1 ------>NtERF2   -----   tttgagccaatatgacgctaaaggtcaaaatattatgaccctaaatgtcagaaattgaccccataagtcataagttaaccgacaccaaagctgatattcg  8910600                                                                          -------->HAHB4                                                                          <--------ATHB1                                --------->MYB52(2)                        <---------ICU4                             --------->TOE2(3)                            --------->ATHB51                             <-------GAMYB                               <---------AHL20(2)                            ------>ZmHOX2a(2)                            --------->AHL20(2)                            <---------MYB46(3)                           <---------ATHB51                         -------->HAHB4                               <---------AHL20(2)            -                         --------->YAB1                              --------->AHL20(2)             <                        <---------YAB1                      ----------->GT1                         <                        --------->ICU4        --------->GLK1(1)      <---------AHL20(2)   ---------->ID1 ------MYB52(1)    --------->TOE2(3)          <---------GLK1(1)  <---------YAB1      ------>ZmHOX2a(1) ---->TOE2(3)  <----------DOF2<---------MYB52(1)         --------->MYB52(1)       --------->PCF5<----   ttagagtttagactctccttttcttaatgatcgttagttttagttgggaactcttgggctatcggttaaaattaaataattgtggtcctcttggcccatt  8910700                                                    ----------->RAV1(1)                                                    ------>NtERF2                                                   ----------->HVH21                                                  --------->LBD16                                                  <------NtERF2                                                  ------>NtERF2                                     <                                              --------->ANAC46                                     <-                                              --------->ANAC58                                     <-                                           ------->GAMYB                                        <----                                          --------->MYB46(3)                               --------->MYB55(2)                                          <---------MYB52(2)                               <---------MYB46(3)                                          <---------MYB55(2)                              <---------DEAR3(1)                                  <------MYB46(1)--------->DEAR3(1)          *TSS         <---------AtMYB61                              <---------MYB46(3)<---------LBD16             ------------>CBF <------- -------->ZAT14         >>>>>>>>>>>>>>>>>LFY  --------->ANAC58       ------>NtERF2        --------->ALFIN1 ---------ZAT18         <<<<<<<<<<<<<<<<<LFY--------->MYB52(1)     --------->ATERF1(1)   <---------MYB52(1) ---------ZAT14      ----------->HVH21  ----------->RAV1(1)      <---------DEAR3(1)   <---------LBD16 -----ICU4     ------------>CBF   <------MYB83------->GAMYB    <-----------HVH21--------->ICU4<------   agtgctgtccaaactggcccaatatgacccagtggatggtcccaacaaacgccgcgacaaaactccgtcgctggctgaggcaatgttcaccggtggtggt  8910800                    --------->ZAT2                    --------->At4g35610                    <---------At4g35610              ------>NtERF2                       --------->ANAC58 ----------DOF2     <---------ZAT2             <---------REM1(2) --------ANAC58    --------->LBD16        --------->TOE1(3) --------ANAC58  <---------LBD16         --------->ZAT6                                           --- ----P       ----------->HVH21   --------->ARR14(2)                          <---------ARR11(3) <---- --AtMYB61   <---------ETT(1)    <---------ARR14(2)              <-----------GT1                ----- ---MYB46(3) --------->DEAR3(1) <---------GLK1(1) --------->ANAC58  --------->TOE2(3)    <---------CCA1(2)   agcttttcttctactccgacccggctgaaaatgcaaatccctaaccctagacacggccatggtttataaacctcatcaatttcttctacttatctcttct  8910900                                 <-------TEIL                              <------MYB83                              <---------ANAC46                              <------MYB46(1)                                           <------------                              <---------ANAC58                                      <----------DOF2                              <---------ANAC58                                 ------>ZmHOX2a(2)                             --------->MYB111(1)                              --------->CCA1(2)                             --------->MYB59                                  <---------At4g35610                             --------->MYB46(2)                               <------ZmHOX2a(2)                       ------>ZmHOX2a(1)                                     --------->ARR11(3)                       <---------------AGL15                                 --------->ARR14(2)                --------->ARR14(3)                                           <---------AGP1                <---------ARR14(2)                                           <---------ARR11(3)                <---------ARR14(3)            >>>>>>>>>GT-1                  --------->AGP1 ------->DOF2   --------->ARR14(2)         ----------->GT1                   <---------ARR14(2) -----HSFB2a(2) --------->ARR11(3)         <---------ANAC55(2)              <---------CCA1(2)     <-- ---->HSFB2a(2) <---------ARR11(3)        --------->MYB59                  ----------->ARR10    <----   caaagctaaaccctccaagatattcctctattaggtgcaaaaatcaggtaaatctctatctgtccgatttgaaaccctagatctgcctttcttctctctt  8911000                                                             --------->DAG2                                                            ---------->DOF2                                                       --------------->AGL15        <---------LBD16            <---------At4g35610 <---------------AGL15    <----------DOF2                --------->At4g35610--------->ANAC58    <---------DAG2            ----------->HVH21       --------->ANAC58   <---------ANAC58          <-----------HVH21      <---------GLK1(1)                           <<<<<   <---------ANAC58         <---------ANAC58        --------->GLK1(1)                      --------->MYB46(3) ------------ANAC81         <---------ANAC58       <---------ARR14(2)                     ------>MYB46(1) --------DOF2        ---------->DOF2               --------->ARR14(2)   <----------DOF2   ------>MYB83 --------------------ANAC81<---------MYB46(3)     <------ZmHOX2a(1)<-----------GT1        >>>>>>>>>>>   cttttgcttttctgggttttgctcaaagatgggtgacagcgaagatgaaacaggatacccaaaaaagttttactctttgaatcggcaaaaccatccaatg  8911100                                                                                         <---------ARR14(2)                                                                             ==================HOX2a_HOX2a                                                                             --------->CCA1(2)                       <---------ANAC46                                      <------ZmHOX2a(2)                       <---------ANAC55(2)                                  --------->ARR14(2)                    ----------->HVH21                                       <---------ARR14(2)   <---                   <-----------TGA1                                         <---------ARR11(3)  <----                   <-----------HVH21                                        --------->AGP1      <----                  --------->ANAC46                                          --------->ARR11(3)  <----             <---------MYB59                                              ----------->ARR10<-------TEIL       --------->AtMYB61 --------->ANAC55(2)<----------ID1              <------ZmHOX2a(1)--------->ARR14(2) <<<<EIN3    --------->TOE2(3)          >>>>>>>>>TBF1           ====================HOX2a_HOX2a<----- >>>>>>LFY  <---------ANAC55(2)    <---------ATHB12             <------ZmHOX2a(1)       <------ZmHOX2a(1)   tatagtagaccaatacctaagcgtcacgcgtattacaatgaagaagaagacgaagatgaagtcgaaggagaagaggaagatccacaaggaggatacattc  8911200                                                                                           <---------WOX13(1)                                                                                         --------->ATHB12                                                                                        <---------YAB1                                                                                    <---------ANAC55(2)                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC46 ------LBD16                    ------>MYB46(1)                                     <---------ANAC55(1) -----ANAC58                    ------>MYB83                          <---------ZAT6<---------ANAC58 -----ANAC46    <---------At4g35610                                ------>ZmHOX2a(1)<---------ANAC58 -----ANAC58  --------->HSFB2a(2)            <---------LBD16<---------ANAC58  <---------TOE2(3) --TEIL       <---------HSFB2a(2)  ---------->DOF2          <---------ANAC58 ---------->DOF2   gtggaaatgagaggtttcagaagagacagaaaccaaacaaagtagtttctgggtttgaatttgctggtcctagtgatgctaaagttgcgtatgattggag  8911300  Previous    Next  AGI:  At3g24490.1    Description:  transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT1G54060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71046.1) Range:  from: 8910777    to: 8912203    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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