Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ARR11(3)                    <----------DOF2 -----DEAR3(2)     <---------DAG2 ----DEAR3(1)    ------>NtERF2 ---MYB52(1)    <---------ALFIN1             <---------YAB1 ----HVH21      --------->DEAR3(1)    ------>ZmHOX2a(1)                         <---------YAB1 >DEAR3(1)   --------->ANAC46     <---------ARR14(2)           --------->MYB52(1)          <---------YAB1   gtccccaaacagttttcgccacctttacagttcttgaatcctgcaatatgatcaaacttataagacaacgaattacttagttatacttaaaacatgattc  8889500                                                                    --------->ANAC58                                                                  --------->ARR14(1)                                                                  --------->CCA1(2)                                                                 <---------GLK1(2)                                                                 --------->ARR14(2)                                                                 --------->ARR11(1)                                                                 <---------ARR14(2)                                                         <---------ZAT2                                                         <---------STY1(2)                        ---------->DOF2         --------->At4g35610<-------TEIL                 <----------DOF2           --------->YAB1--------->STY1(2)     ---------->TaMYB80                 <---------DAG2         --------->YAB1  --------->ANAC58     <------ZmHOX2a(1)   ----              <-----------GT1           <---------ICU4  --------->ANAC46  --------->YAB1         <---             ---------->ID1          --------->YAB1     --------->ANAC58 <---------ATHB12        <---            <-----------HVH21     ------>NtERF2 --------->ZAT2 ----------->ARR10                <----         <---------ANAC58        <---------ETT(1) --------->DEAR3(1)--------->ANAC58       --------->ARR14(2)         <---------ANAC58        --------->DEAR3(1)--------->At4g35610   --------->ICU4    <---------ARR14(2)   taatggcacatacttgtcacttttcttaaggcaccccgaccataatcacgagcagcccaagctagtagattcgcaatgaggaatatcagaccgtatacat  8889600                             --------->ARR14(2)                             <---------ARR14(2)                                              <-------                           --------->LBD16                                                   <-------                          <---------HSFB2a(2)                                                <-------                          <---------ANAC58                                                 <-------GAMYB                          --------->HSFB2a(2)                                             --------->MYB111(2)                          <---------ANAC58                  <---------ANAC58              --------->MYB55(2)                          <---------ANAC46                  <---------ANAC58              <---------MYB46(3)                          <---------ANAC55(2)            <---------WOX13(1)             <---------ANAC58         <---------LBD16  --------->ANAC55(2)           <---------ANAC58                <-------GAMYB         --------->LBD16 <---------LBD16                <---------ANAC58                <---------ANAC58 ----->ARR11(3)        <---------MYB52(1)              --------->ATHB12                <---------MYB46(3) --------ARR10       <---------MYB46(3)               <---------YAB1                  <---------AtMYB61 ------ARR14(2)    <---------At4g35610       <---------ARR11(3)                     <----------DOF2 -----CCA1(2)      ------>NtERF2--------->ICU4 ------>ZmHOX2a(2)               <---------At4g35610   atctagccatccagggattgcagccgttgcggaactgattaaaccatgatccattcttgattgcttcatagctatcgtttctgatgctttggttgttgtt  8889700                                                                                 --------->ANAC58                                                                                 --------->ANAC46                                                                          <---------ARR11(3)                                                                        --------->ANAC58       <-----                                                                        --------->ANAC58      <------                             ---------->DOF2                         <------ZmHOX2a(2)    --------->ZAT14                           ------>ZmHOX2a(1)                        <---------ARR11(3)    <------ZmHOX2a(2) --MYB46(3)               --------->TOE2(3)----------------------->TaNAC69(2)    --------->ANAC58 --REM1(1)              <---------------AGL15     ------>ZmHOX2a(1) --------->ARR11(3)    =========== ----RAV1(1)            --------------->AGL15     ==========================HOX2a_HOX2a --------->At4g35610   gctaacgcttgtaccggtctccattactccttaaagttaccaagactctctcctcttcatgtcattagaagatcaagaaattcaagaaacagatcactca  8889800                                                              --------->ANAC58                                                          ---------->DOF2                      <---------GLK1(1)                ----------->GT1         --------->ARR14(2)                          --------->MYB52(1)         <---------ARR14(2)                   ----------->GT1 --------->ANAC46        <------ZmHOX2a(1)                   --------->GLK1(2) --------->ANAC58 ----ICU4--------->ARR11(3)        --------->At4g35610 <----------ID1                 ------>ZmHOX2a(1) ---ATHB12            --------->GLK1(1)    <---------GLK1(2)  <----------ID1----------->RAV1(1)    <- ==============HOX2a_HOX2a     <---------ANAC46--------->TOE2(3)        <------ZmHOX2a(1)    <-------   ttccatgggaggattttgcatcagaaatcagtttcttagatgaaagaatcgtcaataacgaaaaacgcaaaacaggagcaacaaattcctgtccctgtcc  8889900                       <------ZmHOX2a(2)                     --------->At4g35610                     <---------At4g35610                 =============HOX2a_HOX2a       <---------GLK1(1)                                                       --------->ANAC58       --------->GLK1(1)         *TSS               ------------------------>ANAC81 ----------HVH21 <-----------HVH21             --------->YAB1                  --------->ANAC58   --- ----HVH21       ------>ZmHOX2a(1)        ------------>CBF   ----------->GT1<------NtERF2    <-------   ctgtcagagatttctcgtccttcagatcaaaacctgtggaaataaacaatgagaattcaaaaaatgaaaaacagagtcggcaagaacagaacaagaagac  8890000                                    --------->YAB1                                   <---------YAB1                                <---------MYB52(1)                              --------->ANAC55(2)                        <---------YAB1                     --------->GLK1(2)                     --------->ARR14(2)                                       --------->ALFIN1   <---                     <---------ARR14(2)                                  --------->MYB52(1)      <---                    <---------GLK1(2)     ---------->DOF2      <---------ATHB12        <---------YAB1 ------->DOF2 <------ZmHOX2a(1)<-------GAMYB        <---------ZAT18     <---------ARR14(2)       ---- ---ID1   ---------->DOF2     <---------ANAC55(2)   --------->ZAT18     --------->ARR14(2)    <------   aaaagaatgaagcaaaggataagaatctgattccgttatcaaaacaaagagaagagcacatacaaatcaattcagaaacggtggagattacaattggtag  8890100                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)--------->ANAC58                                                                    --------->GLK1(2) --------->ANAC58 ------GLK1(2)                                                     <---------GLK1(2)---------->DOF2 ------ARR11(3)                     <---------ARR11(3)          --------->ANAC46  ------->GAMYB ----->ARR11(3) <-------TEIL        --------->ARR11(3)      --------->AtMYB61  ----------->RAV1(1)<-- --P   --------->ZAT18  <-----------GT1<----------DOF2   <-----------GT1 <---------MYB52(1)       <--   attttgaagtgaacaaaattcatgttttacatgagaaacatctttagtctattctcaaaaaaccacacagaatccgtttctcaacagaaagcatctcgtt  8890200                                                                                           <---------YAB1                                                                                    --------->ARR11(3)                                            <---------MYB52(2)                      --------->GLK1(2)                                           --------->ANAC58                         <---------ARR11(1)                                           --------->ANAC58                         <---------ARR14(2)                                           --------->ANAC46                        <---------CCA1(2)                                --------->ANAC55(2)        <----------DOF2     --------->ANAC58             --------->RAP2.6(2)<---------ANAC55(2)  <---------ARR11(3)       --------->DAG2           --------->At4g35610  <---------ANAC46  <----------DOF2  <---------MYB59 <---------ARR14(1)           <---------At4g35610  <---------ANAC55(1) <---------CCA1(2)        ---------->DOF2      <--       <-----------HVH21     <---------ARR14(2)  --------->TOE1(3) --------->TOE2(3)<---------ARR11(3) -------ANAC58               --------->GLK1(2)<-----------GT1   <-----------GT1--------->ANAC58 <---- -------ANAC58               --------->ARR14(2)  --------->TOE2(3) --------->TOE1(3)--------->ARR14(2)   tcgtttctgtttcagccgaacataaacagagaatacgtatagtgcaagtaacctttatcttctttttaacctaaactaaaaaagcaaatctttataagtg  8890300                                                     --------->TOE2(3)                                                     --------->TOE1(3)                                                  <-----------GT1                                              --------->TOE2(3)                                      --------->CCA1(2)                                     --------->ARR11(1)                                     --------->ARR11(3)                                     <---------ARR11(3)      --------->ARR14(2)             --------->ARR14(2)                          <----------ID1    --      --------->GLK1(2)              <---------ARR14(2)                ---------->DOF2           ----      <---------ARR14(2)             <---------GLK1(2)              --------->YAB1               ---- -------WRKY12             --------->AHL20(2) --------->TOE1(3)   <---------WOX13(1)           <----- -------HVH21              <---------AHL20(2) <----------DOF2  <---------YAB1  ---------->DOF2 <-----   tcaacgagaatccacaatagatggctcattttaatccaagatttgcaactttaaaccttaaccatatgaatgataaagactaaaagacaaaaacatacca  8890400  Previous    Next  AGI:  At3g24460.1    Description:  TMS membrane family protein / tumour differentially expressed (TDE) family protein. similar to MEE55 (maternal effect embryo arrest 55) [Arabidopsis thaliana] (TAIR:AT4G13345.2); similar to MEE55 (maternal effect embryo arrest 55) [Arabidopsis thaliana] (TAIR:AT4G13345.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65555.1); contains InterPro domain TMS membrane protein/tumour differentially expressed protein; (InterPro:IPR005016) Range:  from: 8885825    to: 8889933    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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