Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->ANAC46       --------->ANAC58                                                           --------->GLK1(2) -----------GT1                                          <-----------ARR10<------ZmHOX2a(1) ----->YAB1                   <---------ARR14(2)         <---------ARR11(3)      --------->YAB1 ------ICU4                   --------->ARR14(2)         --------->ARR11(3)     <---------ATHB12 ---->ICU4        --------->TOE2(3)   --------->ANAC46   --------->ARR14(2) <------ZmHOX2a(2) -----YAB1      <-------TEIL  <---------ARR11(1)         <---------ARR14(2)<---------ARR11(3) --HAHB4  ---------->DOF2     <---------ARR11(3)--------->ANAC46       --------->YAB1 -->YAB1--------->MYB46(3)   <---------CCA1(2)  --------->ANAC58----------------->AGL2 --YAB1--------->ANAC58   --------->LBD16       --------->ANAC58----------------->AGL3             --   tattacctcacccaaagcttcattaatccccaaatctttcacaaaaccacaagaaacaatatctgtcccaaaatcaggatcaataatctgagacagagcc  8871800                                        --------->ZAT6                                       ------>MYB46(1)                                       -------->P                                       ------>MYB83                                      ----------->RAV1(1)                                    <-------                                     --------->AtMYB61                              --------->YAB1        <----------DOF2     <---------ALFIN1                            ----------->GT1      <-------  <---------ALFIN1        ----------->RAV1(1)                          ----------->GT1 --------->ARR11(3) ------->REM1(1) <---------YAB1     --------->MYB46(3)            <-------TEIL   --------->RVE1(1)   ttcaacacatctttttctgatgtttgagcaacactctcaccaacactactactagctgttttccaaaatgcataagttaaaaaatatcagaacttgctta  8871900                  <---------DOF5.7(2)                                      <----------DOF2                --------->DOF5.7(2)        <----------ID1             <---------At4g35610               --------->TOE1(3)       ---------->DOF2          --------->At4g35610               --------->TOE2(3)  <------NtERF2            --------->TOE2(3)   <---------At4g35610       <---------ANAC46          --------->LBD16           --------->TOE1(3)   --------->At4g35610   ------>ZmHOX2a(1)        <-----------RAV1(2)         <-----------GT1  --------->At4g35610  <------ --ANAC58    <---------TOE1(3)  <---------ANAC46   <----------DOF2----------->HVH21        --------->GLK1(2) --ANAC58    <---------TOE2(3) <---------LBD16--------->MYB46(3)<---------At4g35610       <---------GLK1(2)   gtctccttcgcgtataacgttaacaatttttcaggcggagacaaaggaacaaactttataaccttgagctgaagcagctttagctacagagagattctga  8872000                      <---------HSFB2a(2)                      ------>ZmHOX2a(1)                     <---------LBD16               <---------ANAC58               <---------ANAC58            --------->ARR14(2)             <---------ANAC58            <---------ARR14(2)             <---------ANAC58            <---------GLK1(2)      --------->MYB52(1)                   --------->ANAC58     <-------           <------ZmHOX2a(1)     --------->ARR11(3)                     --------->ANAC58     <------- ---YAB1 <---------TOE2(3)     <---------TOE2(3)    ----------->GT1---------->DOF2 <---------ANAC46 <   gagacccgtttgaggattcttgtcctggagattgagataatggaagcttgagaatggagaaacttgtgagaaagaagcaatcttgttgtggaattgcttc  8872100                              <---------RAP2.6(3)                              ------>NtERF2                              --------->LBD16                             --------->RAP2.6(2)              <---------HSFB2a(2)                                                   ----------->GT1 --ANAC58  ------->TEIL <------ZmHOX2a(1)             <------NtERF2              --------->ALFIN1 --ANAC58 <---------GLK1(2)  --------->ANAC46      --------->At4g35610 <----------ID1 ----------DOF2  ---------->DOF2  --------->MYB46(3) --------->RAP2.6(2)--------->CCA1(2)        ----   ttctttgggtctgaatctcgaaagaaggatgccgcaacgactgtggatgaagaagcggcattgctacaagagagagacgaagagagtggcaaaaaaaact  8872200                                                                         --------->YAB1                                                                         <---------ICU4                                                                        --------->ICU4                                                                      <---------ICU4                                                                      --------->YAB1                                                                  <---------YAB1                                                                  <---------AHL20(2)                                                               <---------YAB1                                                              <---------AHL20(1)                  <--                                                              <---------AHL20(2)               <-----                                                         --------->AHL20(2)             --------->YAB1         <---------YAB1                                  <---------AHL20(2)         --------->AHL20(1)         --------->ICU4                    <----------DOF2  <---------YAB1 <---------YAB1  --------->AHL20(2)        *TSS                    ---------->DOF2  ---------->DOF2 <---------AHL20(2) <---------AHL20(1)       --------->YAB1       <----------DOF2<---------DAG2<---------YAB1 <---------YAB1 <---------YAB1 ----->MYB52(1)   ------>ZmHOX2a(2)----------->GT1    <----------DOF2<---------YAB1 <---------ARR11(3)   agcggtctgtgataatttgatcgctcaactctttaaaagataaaactttttcaaagctttttattatttttattattattattcaatatatcataaattt  8872300                <---------AHL20(2)                <---------YAB1       <---------ANAC58              <---------RVE1(1)      --------->ALFIN1              <---------CCA1(1)      <---------ANAC58    --------->YAB1           <-----------GT1                           <---------TOE2(3) ---------GT1--------->ARR11(3)    <---------TGA1a             --------->YAB1         ------->TEIL ----ICU4    <---------ARR11(3)    <---------ANAC46    <---------TOE2(3)     <-----------GT1   ttacatttgtaatcagatattattgttttttttactgatgtgtgtcaaattacatctaagataaatcaaaattaagtttttactgatgtatgttgaattc  8872400                                                                                                    <                                                                                                  ---                                                                                                 <---                                                                                              -------                                                                                       ---------->DOF2                                                                         --------->TOE2(3) <xxxxxxxxx                                                             <---------ANAC55(2)     --------->ANAC58                                                             ----------->GT1         --------->ANAC58                          --------->TOE2(3)          --------->YAB1 --------->AHL20(2)<------ZmHOX2a(1)         <----------DOF2 ----------->GT1     <---------TOE2(3) --------->AHL20(2)   xxxxxxxxxxxxxxxxx ---------->DOF2  --------->ZAT6             <---------YAB1--------->AHL20(2) ---------->DOF2 <------   tacaaaagtttcttttgttaacacaaaatgttaaatgtttcgaaattaagataaatcaaaattaagtaaattaaaacttaaaaagacaggaaagcagatt  8872500                                                                                 <---------ATHB12                                                                               --------->WOX13(1)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                                                             <---------ATHB12                 ----------->GT1                                           --------->WOX13(1)    ----------->GT1                                                   ------>ZmHOX2a(2) ---------WOX13(1)                                                   <------ZmHOX2a(2) ------>ATHB12   --------->ATHB12                                   --------->AGP1  <---------YAB1 ------YAB1     <---------YAB1                                      --------->ARR14(2)         ------ -->ARR14(2)  --------->At4g35610                                   <---------ARR11(3)       <xxxxxxx xxxxxxxsmallRNA(i)  --------->AHL20(2)                             --------->ARR11(3)    <---------YAB1 xxxxxx>smallRNA(le3)<---------AHL20(2)                             <---------AGP1--------->YAB1<---- ---ARR14(2)  <---------At4g35610                 --------->AHL20(2)<---------ARR14(2)<---------GLK1(2)   tgattgaagtaaattcagatgattaaaatgttagatttagagaaattttcaaaaaaatagactaatagtagatctagcaattaatcaagattgttattgc  8872600                 --------->YAB1         <----------ID1       --------->ZAT6    --------->HSFB2a(2)    <---------HSFB2a(2)    ----------->GT1     --------->ATHB51 --->ZAT18       --------->TOE2(3)            --------->ICU4 xxxxxxxxxxxxxxxxsmallRNA(i2) <---------AHL20(2) <---------WOX13(1) -------GT1    <---------ARR11(3)             <---------YAB1   <---------MYB59 <---------ANAC46     -   accgttctaaaactacaaatcttaatctatagttaatcgactctcgttataattgactaactatgcctaacaatattggttttgtgtctccatctaaaat  8872700  Previous    Next  AGI:  At3g24430.1    Description:  HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101); ATP binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19540.1); similar to hypothetical protein OsI_003482 [Oryza sativa (indica cultivar-group)] (GB:EAY75635.1); similar to hypothetical protein OsJ_003179 [Oryza sativa (japonica cultivar-group)] (GB:EAZ13354.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ50561.1); contains InterPro domain Protein of unknown function DUF59 (InterPro:IPR002744); contains InterPro domain Mrp, conserved site; (InterPro:IPR000808) Range:  from: 8868590    to: 8872208    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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