Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <--------P                                                                  <---------TOE2(3)                                                             --------->ATHB12                                                            --------->ICU4                                                          <---------ICU4                          ---                                                          --------->YAB1                          <--                                                         <---------ATHB51                       -----                                                         --------->ICU4                         -----                                                <-----------GT1   <---------TOE1(3)          <-------            --------->ANAC46                 <---------ICU4 <---------YAB1                   <-------     ----------->GT1                   <----------DOF2   <---------ATHB12 <---------ZAT6 <---------ZAT14   ctaaatgatgttatacagaacagaaatagattatacatatgctttgatttttacttccaattatgattaagggtaagtgttatactaagagtgaagcgta  8864500                                                                            ------>NtERF2                                                                           --------->DREB2C(2)                                                                           <---------ETT(1)                                                                           ----------->HVH21                                                                           --------->ANAC46                                                                           --------->LBD16                                                                         --------->ANAC46                                                                        --------->DEAR3(1)       --------->At4g35610                                           --------->AtMYB61  <---------HSFB2a(2)   --------->ARR14(2)                          <------ZmHOX2a(2)              <-  --------->HSFB2a(2)   <---------ARR11(3)                --------->At4g35610                     --- ------>TOE1(2)         <---------ARR14(2)               ----------->RAV1(1)----------->RAV1(1)   --- -------ANAC46          --------->ARR11(3)    --------->AHL20(2)--------->MYB46(3)                --- -->TEIL              ----------->ARR10     <----------DOF2   --------->MYB52(1)        <---------ANAC58 ---->SPL7        <------ZmHOX2a(1)        <-----------------AGL3  <-----------HVH21    <---------ANAC58 --ANAC58      --------->YAB1        --------->ALFIN1  --------->At4g35610--------->LBD16<---------SPL7 --ANAC58     --------->ICU4        <-----------HVH21<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       ---   ccttggagaagcagcaataaggagaagatttgtaaacaagtcgggccttttaatagaagcagcacaaccgatcacccccgacatggaatggcctacgaac  8864600                                                    --------->O2                                         <-----------HVH21                                        ------>ZmHOX2a(2)                                        ===========================HOX2a_HOX2a                                       <------ZmHOX2a(2)       <---------MYB59                 ============================HOX2a_HOX2a ----------HVH21                      <---------ARR11(3)                                         <--- ------>ANAC46                     --------->YAB1   <---------O2                               <----- ------>ANAC58       ==========================HOX2a_HOX2a           <----------DOF2        --------- ------>ANAC58       =========================HOX2a_HOX2a    ----------->GT1                <-------- -------->HVH21      ------>ZmHOX2a(1)--------->ARR11(3)    <------ZmHOX2a(1)<-----------HVH21------>ZmHOX2a(2)   acgacagggccaaacttcaactcctccataagagcaatgagatcgtcagagaagacgtctaaggagttatactttgaagggtcatagagagtttgatctt  8864700                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                      --------->ATERF1(1)                                                                                      <------NtERF2                                                                                     <---------ATERF1(1)                     <---------WRKY12                                         ------>MYB46(1)     ---       --------->LBD16---------->DOF2     <---------ARR14(2)     <---------AHL20(2) <---------DEAR3(1) ------AHL20(2)      <---------WRKY38(1) <------ZmHOX2a(1)    <---------AHL20(2)  <-----------HVH21 -----DOF2    --------->ANAC58           --------->ATHB12<---------MYB52(1)   ------>MYB83--------->ANAC46 >ARR11(3)    --------->ANAC58    <----------DOF2       ----------->GT1  --------->MYB52(1)  -------- -ARR11(3)  ---------->DOF2 --------->AtMYB61 <----------ID1<---------YAB1 --------->DEAR3(2)<-------   taatggctccagagaaaagccagtcaaagaccaaaactttgaaggattgggacaagaccggtattattttatcccaaaccgactggtcgcctccgaaacc  8864800                                                                                <---------MYB55(2)                                                                         <---------YAB1                                                                   <---------ARR14(2)                                                                   <---------ARR11(3)                                                                   --------->ARR11(3)                                                                   --------->ARR14(2)                                                                  --------->GLK1(1)                                         <---------ANAC46         <---------RVE1(1)                                <---------ATHB12                  <---------GLK1(1)                            --------->MYB46(3)                   --------->ARR14(2)                            --------->DEAR3(2)    <---------ANAC46<---------CCA1(2)                        ------>ZmHOX2a(1)<---------ANAC58        <---------ARR14(2)       <---------ARR11(3)  ------->TEIL ---------->ID1         <------NtERF2    --------->MYB46(3) ------>ALFIN1        ----------->RAV1(2)<---------ANAC58      --------->LBD16<-----------GT1 ->ARR14(2)     ===============HOX2a_HOX2a  <-------TEIL      --------->RAP2.6(2)------->GAMYB --ARR14(2)     ------>ZmHOX2a(2) --------->ARR11(3)         <---------LBD16<---------WOX13(1)   gtgtgccaagaccatcgatctctctcctgaaccgatgattttggcgttcatagcggatgcaaggccggatatcttctgattaaccaccatgcttaagtac  8864900                                              ---------->DOF2                                             <---------AHL20(2)                                           <-----------TBP                                        ---                                         <-----------TBP                                         ----                                        <---------ARR14(2)                <---------YAB1         ----                                     <---------ANAC46                     <---------TOE1(3)      <---                                 <---------ANAC58                         <---------TOE2(3)     <----                                 <---------ANAC46                   <------MYB46(1)  <---------WOX13(1)                        --------->YAB1  --------->ARR14(2)          <------MYB83  <---------AHL20(2)                       <---------YAB1<---------ANAC58              --------->MYB59--------->AHL20(2)                     *TSS        <---------ANAC58                  <---------TOE2(3)<------------CBF                     <----------DOF2 <---------ANAC58      --------->CCA1(2)    <----------DOF2 -----   aagagttttgttagatgggacaactttgataagttgtgtgcgtatatataaaggagaagagagatggattaggtttatggttctttaattgacattcaac  8865000                      --------------->AtSPL8     --------->AHL20(2)     <---------AHL20(2)   <-------TEIL ------>MYB52(1)      <---------------AtSPL8 --->GAMYB            --------->MYB59 ----->AtMYB61        --------------->AtSPL3 ------ALFIN1     <----------DOF2             <----------DOF2                                       < -----MYB55(2) --------->ANAC58              <---------DAG2                                         - ---->MYB46(3) --------->ANAC58   <---------ATHB12 <<<<<<<<<<<<<<<<<LFY --------->ATHB12           --   caccgattttattaggctcgcattttggtacatccaaacatttatggccttttcaacaatggctgtatttgtattcattgtccatctacatagcatctta  8865100                                                                                        <---------ICU4                                                                                        --------->ATHB51                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                        --------->ATHB12                                                                                       --------->ICU4                                                                                       <---------YAB1                                                                                     <--------HAHB4                                                                                     --------->YAB1                                                                                     <--------ATHB1                                                                                     <---------ICU4                                                                                     --------->ATHB51                                                                                     -------->HAHB4                                                                                    --------->ICU4                            <---------KAN4(2)                                       <---------ATHB51                        --------->YAB1                      <----------DOF2    ----------->GT1           <---------ARR11(3)                               <---------DAG2    --------->DAG2 ------ZmHOX2a(1)  <---------YAB1                --------->ANAC58           ---------->DOF2 ---------->GT1  --------->YAB1<-----------GT1   --------->ANAC46         <---------AHL20(2) --------->GT1--------->WOX13(1)                 --------->ANAC58     <---------ZAT6<---------YAB1   gaggataaaacaatatccatcataaataagaatatactactccatgtgaaaacgaaactctactttttggtagtattaaaaaggtaataattatttggac  8865200                                                                          <---------ANAC58                                                               <----------DOF2    ---------->DOF2              <-----------GT1                              <----------DOF2<---------ANAC46     <-----      ----------->GT1                              ---------->DOF2        <---------ANAC58<----------DOF2   tcgatatgaagtatatatactagttttgtttgtatgtgtaaagtttagagtatcaaagtgtctttctttttttttggtgtgtatcaaagtgtcttttttt  8865300                                                            <---------YAB1                                                           <---------AHL20(2)                                                       <---------ICU4                                                       --------->YAB1                                          ---------->DOF2<---------YAB1                 --------->At4g35610                             --------->AHL20(1)    --------->AHL20(2)                   <---------At4g35610                             <---------ARR11(3)    <---------AHL20(2)        <-------TEIL                 ----------->GT1      <----------DOF2 <---------YAB1--------->AHL20(2) --------->GLK1(2)              <---------MYB46(3)<---------AHL20(2) <---------AHL20(1)   --------->AHL20(2) ------GT1 ------->TEIL      <---------AHL20(1)    --------->AHL20(1)   <---------AHL20(2)-----------   ctatcaaacaatgcatttgttgtaaaaacaatatttttttcttttaaagctaatttattattattttcgaaaaaataaatgcattaactaatctgacatt  8865400  Previous    Next  AGI:  At3g24420.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT4G37470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65563.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 8862847    to: 8864921    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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