Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                         --------->bZIP60(1)           <-----------GT1                                                         <---------TGA2(1)         --------->AHL20(2)                    <---------YAB1    <---------AtMYB61  --------->TGA2(1)         <---------AHL20(2)                <----------DOF2    <---------YAB1        <---------bZIP60(1)   <---------AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->YAB1             --------->AHL20(2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <----------DOF2              --------->AHL20(2)       --------->TOE2(3)     --------->SPL7  ---------->ID1                 <---------ARR11(3)-------   <---------ARR11(3)  --------->GLK1(1)    <-----------GT1                 --------->ARR11(3)-------   --------->ARR11(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          ------->TEIL <---------AHL20(2)   agaaagatacctcataagctttctgataccctacgttgtgatggtttttctctttaatgacatcatatatgtatataagatttatttatttcccaaacga  8837300                                                            --------->MYB52(1)                                                          <---------ATHB12                                                          --------->MYB46(3)                                                        --------->WOX13(1)                                                   <--------ATHB1                                                   --------->ATHB12                                                   -------->HAHB4                                                --------->YAB1                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                  <-----------GT1 --------->ICU4                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                          ------->GAMYBxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     ---------->DOF2                  <---------YAB1<---------AHL20(2)<---------YAB1            --------->AHL20(1)                  --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------AHL20(1)        <-----------RAV1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <-----------GT1   <-----------GT1<---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->AHL20(2)  --------->AHL20(2)   --------->MYB52(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   --------->YAB1 >MYB52(1)     <----------DOF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->AHL20(2)     >>>>>>>>>>MYB80 -->ANAC58 <---------ANAC46xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)------->GAMYB<---------AHL20(2) -->ANAC58---------->ID1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ANAC46 <---------YAB1      --   aaaattaactctgtcgtctttttattaacggaaatttatcgatatgcctataatgattcaatcaacgaaatttactattttattataaagtcaaaccaaa  8837400                                                                                    <------ZmHOX2a(2)             <---------TOE2(3)                                                     --------->ARR14(2)            <-----------GT1                                                     --------->HSFB2a(2)       <---------AHL20(2)                                                      <---------LBD16       --------->AHL20(2)                                                     <-----------GT1    <---------ARR11(3)                                         --------->AHL20(2)  <---------ARR14(2)    --------->ARR11(3)                     xxxxxxxxxxxxxxxx>smallRNA(i)      <-----------GT1 <-------  <---------TOE2(3)                     xxxxxxxxxxxxxxxx>smallRNA(i)  <-----------GT1       <--------  <---------TOE1(3)                     ----------------->AGL1 <---------AHL20(2)--------->LBD16   <- ------->AHL20(2)         <-------TEIL  <-----------------AGL1--------->AHL20(2)<---------HSFB2a(2)--   atttaagattttattaacattttgaaaattcatgtttttatgtcccaaatttgaaagtttgcaaaaaaattttgacatttttcccgatctaaatttacca  8837500           ----------->GT1          --------->DAG2         ---------->DOF2                                   <---------YAB1       --------->AHL20(2)                                ----------->GT1    <---------------AGL15                                --------->YAB1    --------------->AGL15    <-----------GT1            <---------YAB1         --------->WRKY12 <---- --At5g28300   ---------->DOF2                          ----------->GT1        --------->WRKY38(1) ---GT1--------->YAB1     ----------->GT1        <------ZmHOX2a(1)  --------->AtLEC2        <-------- --------AHL20(2) <----------ID1                <----------ID1  --------->ARR11(3)        <---------- ------->AHL20(2) ----------->GT1            ---------->DOF2    <---------ARR11(3) ------>ZmHOX2a(2)   tttaaacaataaaaagtaaaaggtcaaaatgtaacattttagaaacacaaaggacaaaatgataaatatcatgccaacgcgttgatcggtttttagctct  8837600                                                                                              <------                                                                                            <--------                   <----------DOF2                                                   <---------WOX13(1)          <---------ANAC58                                                          <---------ANAC58 ------DOF2     <-----------GT1            <---------ALFIN1         ------->TEIL    <---------AtLEC2 -At4g35610 <---------MYB52(1)       ---------->DOF2         <---------ANAC58       <---------ANAC58 -GT1     <---------ANAC58       <---------TOE2(3)   *TSS    <---------ANAC58  --------->MYB52(2)----   tttcttccgatttcgttttttctttcttcatctctaagattaagcacaccttggcatccattttcgtttgaatctcaacgttttttgcttgattttagct  8837700                 --------->ANAC58                 --------->ANAC46            --------->ANAC58               --------->TOE1(2)          <------NtERF2             --------->CCA1(2)          --------->ETT(1)             ======================HOX2a_HOX2a            <---------ARR14(2)         --------->RAP2.6(3)             <------ZmHOX2a(2)            <---------ARR11(3)         --------->DDF1                 <---------ARR14(2)            --------->ARR14(2)     --------->YAB1                     --------->ARR14(2) ---At4g35610<------ZmHOX2a(2)  --------->YAB1            --------->YAB1------>ZmHOX2a(2) ---GT1     --------->AGP1  <------ZmHOX2a(1)--------->ANAC58 <---------SPL7 ----------->HVH21 ----->At4g35610 --------->ANAC58  <---------ICU4        <---------ATHB12    ----------->TGA1    <---   tctgagagagtccagatccaaggaattggaggaagaataatgtcggcaaggcatgggcaatcgtcgtatcgagatcggagtgacgaattcttcaaaattg  8837800                                    <---------ANAC46                                   --------->ATERF1(1)                                   --------->RAP2.3(1)                                   <------NtERF2                                  <---------DEAR4(2)                                  <---------ATERF1(1)                                  <---------ORA47(2)                                  ------>NtERF2                                  <---------ERF1                                  <---------RAP2.3(1)                                 <---------RAP2.3(2)                                 <---------RAP2.3(3)                                 <---------ATERF1(2)                                 --------->ATERF1(2)                                 <---------DEAR3(1)                                 --------->DEAR3(1)                                --------->ATERF1(1)                               --------->LBD16                               <---------RAP2.3(1)                               ------>NtERF2                              <---------DEAR3(1)              --------->YAB1                        -                             --------->ATERF1(1)           -------->HAHB4                           <                             <------NtERF2                 --------->YAB1               <------ZmHOX2a(2)                            ------>NtERF2                  <---------ICU4              --------->ARR14(2)                            <---------ATERF1(1)           --------->ICU4               <---------ARR14(2)                           <---------ARR14(2)        ----------->GT1                   --------->GLK1(2)                          --------->ATERF1(1)        --------->YAB1                    <---------ARR14(3)                         --------->LBD16           --------->SPL7                      <-----------ARR10                         <---------ATERF1(1)     <---------RAP2.6(3)                   --------->ARR11(3)                       <---------LBD16          <---------ANAC58                       <---------ARR11(3)                --------->ATHB12<---------ABI4(1)<---------SPL7                        --------->ARR14(3)            --------->GLK1(1)<---------LBD16    <---------ANAC55(1)                   <------ZmHOX2a(1)          <------ZmHOX2a(1)--------->ARR14(2)   <---------ANAC58            <---------HSFB2a(2)    <-        <---------TOE2(3)------>NtERF2          <---------ANAC46            --------->HSFB2a(2)  ---- ------ANAC46 <------ZmHOX2a(2)<---------ATERF1(1)<---------MYB52(1)   <---------MYB46(3)------>ZmHOX2a(2)   tggagactctaaggagatcgattgctccggctccggcggcgaataatgtgccgtatggtaataatcggaacgatggtgcgagaagagaggatcttatcaa  8837900                                                                                --------->TOE2(3)                                                                               --------->ANAC55(2)                                                                               --------->ANAC58                                                                               <---------ANAC55(2)                                                                               --------->ANAC58                                                                      <---------ANAC58                                                                      <---------ANAC58                        --------------->AGL15      <-----------HVH21 --------->ZAT2 -------->ARR14(2)      <---------------AGL15     <---------O2       <---------ZAT2--------->MYB52(2) ---------ARR14(2) <---------At4g35610            --------->O2       --------->HSFB2a(1) --------GLK1(1)  --------->ARR11(3)              --------->ANAC46   <---------HSFC1(2)             < ----->MYB46(3)   <---------ARR11(3)       --------->WOX13(1)        --------->HSFC1(2)       <------   caaatccgagttcaacaagagagcttctcatattggtttagctattaatcaaacgtcgcagaagctatcgaagcttgcgaaacgtaagttgttttagtgt  8838000                            <---------ARR14(2)                            ------->TEIL                       ----------->GT1                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   --------->ARR14(3)                   --------->ARR11(3)                   <---------ARR14(3)                   <---------ARR14(2)                   <---------ARR11(3)                               --------->YAB1               ----                   --------->ARR14(2)                           <------ZmHOX2a(1)                <---                 ----------->ARR10                        <---------At4g35610         <---------HSFB2a(2)             <------MYB83   --------->ARR14(2)        <----------DOF2                 --------->HSFB2a(2) ---------At4g35610--------->AGP1                    <---------ANAC58          XXXXXXXXXXXXXXXXXXXX>MIR832-5P ---ZAT6     <------MYB46(1)--------->GLK1(2)        <---------ANAC58        <---------MYB46(3) -----   ttagctcatttgatttggtgagatcttgtgaatctggattagttaacctgtaatggctttagcttaggaattagaatggtgcttagatcgagaaccgatt  8838100       <---------ANAC58       <---------ANAC58       ----------->GT1       --------->TOE2(3)       <---------ANAC46     <---------YAB1                      --------->GLK1(2) ----->AHL20(2)           <---------CCA1(2)                    --------->ARR11(3)          <--------- ------AHL20(2)         <---------ANAC58           <---------WOX13(1)            <---------ICU4------ ---->AHL20(2)          <---------ANAC58   --------->GLK1(2)  <---------At4g35610--------->ATHB51   tatttagtggtgtgaatttctcaagtgcttatcttagtactcgagaatgtgtaattggtatggaagatgctgtattttgtgcataattgttaactttgtc  8838200  Previous    Next  AGI:  At3g24350.1    Description:  SYP32 (syntaxin 32); SNAP receptor. Identical to Syntaxin-32 (SYP32) [Arabidopsis Thaliana] (GB:Q9LK09); similar to SYP31 (T-SNARE SED 5), SNAP receptor [Arabidopsis thaliana] (TAIR:AT5G05760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65576.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 8837653    to: 8839589    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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